New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3621553	NA (NA)	4 (0.020)	4/288	NT	100%	coding (2362/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	= 3621603	0 (0.000)					coding (2412/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

AACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGAACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGC  >  NC_000913/3621330‑3621798                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                    aaCCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGAACCGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCCGGATACAGGAAAGCCTGCCCCCCGGGGACAGGAGGCCCTACGCCAGCGGTGACCTGGGAGGCt                                                                                                                                                                                                    <  4:442275‑M2/275‑2 (MQ=255) aaCCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCCCTGGCAGCATGAGACCAGACATGCTTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCGTGCAGGC                                                                                                                                                                                                     <  1:88188‑M2/274‑1 (MQ=255)                                                                                                                              aGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGC                                                                                                                                                                                                     >  8:8910‑M2/1‑149 (MQ=255)                                                                                                                              aGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGC                                                                                                                                                                                                     >  7:709181‑M2/1‑149 (MQ=255)                                                                                                                               gACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGC                                                                                                                                                                                                     >  6:87368‑M2/1‑148 (MQ=255)                                                                                                                               gACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGC                                                                                                                                                                                                     <  5:544460‑M2/148‑1 (MQ=255)                                                                                                                                                                                                cgcAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGC                                                                                                                                                                                                     <  4:206924‑M2/83‑1 (MQ=255)                                                                                                                                                                                                                         aCCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagt                                                                                                                              <  8:71418‑M2/129‑72 (MQ=255)                                                                                                                                                                                                                         aCCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagt                                                                                                                              >  7:71418‑M2/1‑58 (MQ=255)                                                                                                                                                                                                                              aCAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttc                                                                                                                         >  5:360269‑M2/1‑53 (MQ=255)                                                                                                                                                                                                                              aCAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttc                                                                                                                         <  6:360269‑M2/129‑77 (MQ=255)                                                                                                                                                                                                                                                                            ggCAGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaat                                                        <  6:368103‑M2/148‑142 (MQ=255)                                                                                                                                                                                                                                                                            ggCAGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtc                                                                                                                                                <  1:81501‑M2/60‑54 (MQ=255)                                                                                                                                                                                                                                                                             gCAGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgc                                                      <  8:33085‑M2/149‑144 (MQ=255)                                                                                                                                                                                                                                                                             gCAGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgc                                                                                                                  >  4:708933‑M2/1‑6 (MQ=255)                                                                                                                                                                                                                                                                              cAGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgc                                                      >  6:910954‑M2/1‑5 (MQ=255)                                                                                                                                                                                                                                                                               aGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcac                                                    >  8:630888‑M2/1‑4 (MQ=255)                                                                                                                                                                                                                                                                               aGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcac                                                    >  8:16607‑M2/1‑4 (MQ=255)                                                                                                                                                                                                                                                                               aGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcac                                                    >  8:226967‑M2/1‑4 (MQ=255)                                                                                                                                                                                                                                                                               aGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcac                                                    >  8:313744‑M2/1‑4 (MQ=255)                                                                                                                                                                                                                                                                               aGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgca                                                     >  5:696664‑M2/1‑4 (MQ=255)                                                                                                                                                                                                                                                                               aGGCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcc                                                                            >  4:142002‑M2/1‑4 (MQ=255)                                                                                                                                                                                                                                                                                ggCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcacc                                                   >  8:62605‑M2/1‑3 (MQ=255)                                                                                                                                                                                                                                                                                ggCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcat                                                                                                                                            >  3:81500‑M2/1‑3 (MQ=255)                                                                                                                                                                                                                                                                                 gCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagccagccac  >  1:224892‑M2/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                 gCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccg                                                  <  8:596911‑M2/149‑148 (MQ=255)                                                                                                                                                                                                                                                                                 gCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccg                                                  <  7:750660‑M2/149‑148 (MQ=255)                                                                                                                                                                                                                                                                                 gCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccg                                                  >  7:596911‑M2/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                 gCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccg                                                  <  7:190805‑M2/149‑148 (MQ=255)                                                                                                                                                                                                                                                                                 gCtgtccggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcacc                                                   >  5:489623‑M2/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                    AACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGAACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGC  >  NC_000913/3621330‑3621798

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.