New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3817574 =569 (3.340)17 (0.110) 10/284 NT 3.1% intergenic (+35/‑186) yicC/dinD UPF0701 family protein/DNA damage‑inducible protein
?NC_000913 3817604 = 521 (3.260)intergenic (+65/‑156) yicC/dinD UPF0701 family protein/DNA damage‑inducible protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 650 total aligned reads displayed.

GCCTCGAAGCGCATGTCAAAGAGACCTACAACATTCTGAAGAAAAAAGAAGCGGTTGGTCGTCGTCTGGATTTTATGATGCAGGAGTTCAACCGCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCAATTGATATCACATGGAGTGGGCAATGAACGAACATCATCAACCTTTTGAAGAGATAAAACTGATTAATGCAAACGGAGCAGAACAATGGTCAGCAAGACAACTTGGGAAACTACTGGGTTATTCAGAGTATCGTCA  >  NC_000913/3817334‑3817872
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                            
       ggcacATGTAAAAAAGACCAACAACATTCTGAAACAAAAAGTAGCGGTTAGTCGTCGTCTGCATTTTATGTTGCAGGAGTTCAACCGCGAGTCGAACACACTGACGTCGAGGTATATCAATGCCGAAGTGACAAACTGCGCCATCGAGCTGAGAGTGTTGATTGAACAGATGCGCGAGCAGATTCAGAACATCGAGTAACGCGTAAAGACAATTCTTACTTTGCCGCCTTCACGAATGCCGCCACTCAAACAGCGCGGCATTTTTCTTCCCCGCa                                                                                                                                                                                                                                                                   <  4:370363/271‑1 (MQ=255)
       agcgatgttCAAAAAGACCTACAACATTCTGAAGAAAAAAGAAGCGGTTTGTCGTCGTCTGGATTTTATGATGCAGGACTTCAACCGCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCa                                                                                                                                                                                                                                                                   <  1:80928/267‑1 (MQ=255)
                      gaCCTACAACATTCTGAAGAAAAAAGAAGCGGTTGGTCGTCGTCTGGATTTTATGATGCAGGAGTTCAACCGCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCCCTCAAAACAAGCAGCATTGTTTTTCCCCGCAACATTTAATTcctt                                                                                                                                                                                                                                                     >  4:274441/1‑271 (MQ=255)
                                 ttCTGAAGAAAAAAGAAGCGGTTGGTCGTCGTCTGGATTTTATGATGCAGGAGTTCAACCGCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGTAACACTCGTAACGCCAATTCTTACTTTTCCGCCTCCACAAAAGCCGCCACTCCAACACAGCGGCACTTTTCTTCACCGACAAATTCACTTCTGTTTTTCGTCCCTg                                                                                                                                                                                                                                         >  4:637/1‑275 (MQ=255)
                                                   cGGTTGGTCGTCGTCTGGATTTTATGATGCAGGAGTTCAACCGCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATg                                                                                                                                                                                                                        >  2:332492/1‑274 (MQ=255)
                                                       tGGTCGTCGTCTGGATTTTATGATGCAGGAGTTCAACCGCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGttttt                                                                                                                                                                                                                   <  2:82344/275‑1 (MQ=255)
                                                               gtcTGGATTTTATGATGCAGGAGTTCAACCGCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCa                                                                                                                                                                                                            <  2:274442/274‑1 (MQ=255)
                                                                    gATTTTATGATGCAGGGGTTCAACCGCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGcaca                                                                                                                                                                                                       <  2:690676/274‑1 (MQ=255)
                                                                           tgatgCAGGAGTTCAACCGCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAAAAc                                                                                                                                                                                               >  2:252362/1‑275 (MQ=255)
                                                                                 agagtttCAACCGCGAGTCGAATCCTCTTGCGTCGAAGTCTGTCAATGCCGAGGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGTGTCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTgag                                                                                                                                                                                          <  4:77933/269‑1 (MQ=255)
                                                                                       acAACCGCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAGCTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTca                                                                                                                                                                                   <  2:545335/274‑1 (MQ=255)
                                                                                             gcggttCGAACAACCTGGCGTCAAAGGCTTTCAAGGCCGAAGTTGCAACCTCCGCCCTCGAGATGAAAGTGTTGATTGAGCAGATGCGCGGGCAGATTCAGAACATCGAATAACTCGTAACTCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCCAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTg                                                                                                                                                                             <  4:191689/270‑1 (MQ=255)
                                                                                              cgAGTCGAACACTCTTGCGTCGAAGTCTAGCAATGCTGAAGTGACAAACTCCGACATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACAGTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTg                                                                                                                                                                             <  2:521251/274‑1 (MQ=255)
                                                                                                aGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACCCTGAGAACGTGAGATACTc                                                                                                                                                                                    >  2:362470/1‑265 (MQ=255)
                                                                                                                    aaGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGca                                                                                                                                                                                                         >  4:307024/1‑224 (MQ=255)
                                                                                                                        cTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACt                                                                                                                                                                                                     <  2:307025/224‑1 (MQ=255)
                                                                                                                           tCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCAtttt                                                                                                                                                                                                                                                                              >  6:283408/1‑148 (MQ=255)
                                                                                                                              aTGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTttct                                                                                                                                                                                                                                                                           >  6:779302/1‑148 (MQ=255)
                                                                                                                               tGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTttcttc                                                                                                                                                                                                                                                                         <  7:710323/149‑1 (MQ=255)
                                                                                                                               tGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTttcttc                                                                                                                                                                                                                                                                         <  7:354263/149‑1 (MQ=255)
                                                                                                                               tGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCAGCCACTCAACCAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCGAATTTTGCTATTTTTTTTTGCCCTGCACCCTGAGAATGTAAGATACTCACCACTGAANNNAATTACTGTTACAGCTTTTcttttttttc                                                                                                                                           >  3:225703/1‑273 (MQ=255)
                                                                                                                                 ccGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTTCg                                                                                                                                                                                                                                               >  3:164663/1‑173 (MQ=255)
                                                                                                                                       tGACAAACTCCGACATCGCGCTGAAAGTGTTGATTGGGCAGATGCGCGATCAGAGTCAGAACATCGAATAACGCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCAATTGat                                                                                                                                    <  4:403861/274‑1 (MQ=255)
                                                                                                                                         aCAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGttt                                                                                                                                                                                                                     >  4:97424/1‑191 (MQ=255)
                                                                                                                                          cAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACAtt                                                                                                                                                                                                                                                              <  7:647414/149‑1 (MQ=255)
                                                                                                                                           aaaCTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTc                                                                                                                                                                                                                                                             >  8:79272/1‑149 (MQ=255)
                                                                                                                                             aCTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCa                                                                                                                                                                                                                                                            <  5:226488/148‑1 (MQ=255)
                                                                                                                                              cTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCaa                                                                                                                                                                                                                                                           >  5:781152/1‑148 (MQ=255)
                                                                                                                                               tCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATACAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAGATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAAtt                                                                                                                                                                                                                                                         <  8:606983/149‑1 (MQ=255)
                                                                                                                                                ccGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTcc                                                                                                                                                                                                                                                                        <  8:416747/133‑1 (MQ=255)
                                                                                                                                                 cGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTTAGATACTCGCAACTGTATATAAATACAGTTACAGATTTACTTTTTTTGAAATTGATATCAAATGGAg                                                                                                                         >  4:101931/1‑275 (MQ=255)
                                                                                                                                                     aTCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACaa                                                                                                                                                                                <  2:39128/216‑1 (MQ=255)
                                                                                                                                                       cGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTg                                                                                                                                                                                                                                                 <  7:181128/149‑1 (MQ=255)
                                                                                                                                                        gAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGc                                                                                                                                                                                                                                                <  8:571395/149‑1 (MQ=255)
                                                                                                                                                            tGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGc                                                                                                                                                                                                                                            >  7:519761/1‑149 (MQ=255)
                                                                                                                                                             gAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGc                                                                                                                                                                                                                                            >  6:219112/1‑148 (MQ=255)
                                                                                                                                                              aaaGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCt                                                                                                                                                                                                                                          >  8:640271/1‑149 (MQ=255)
                                                                                                                                                                    ttgattgaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCa                                                                                                                                                                                                                                    >  8:476253/1‑149 (MQ=255)
                                                                                                                                                                        ttgaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGtttttt                                                                                                                                                                                                                  >  2:717018/1‑163 (MQ=255)
                                                                                                                                                                             cAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGAtttt                                                                                                                                                                                                                              >  4:348570/1‑146 (MQ=255)
                                                                                                                                                                               gATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGa                                                                                                                                                                                                                          >  6:35846/1‑148 (MQ=255)
                                                                                                                                                                                     cgAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGtttt                                                                                                                                                                                                                    <  5:803212/148‑1 (MQ=255)
                                                                                                                                                                                       aGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGtttttt                                                                                                                                                                                                                  <  5:35846/148‑1 (MQ=255)
                                                                                                                                                                                           gATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGcc                                                                                                                                                                                                              >  6:565053/1‑148 (MQ=255)
                                                                                                                                                                                              tCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAg                                                                                                                                                                                                           >  5:685417/1‑148 (MQ=255)
                                                                                                                                                                                                  aaCATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGcaca                                                                                                                                                                                                       >  6:687308/1‑148 (MQ=255)
                                                                                                                                                                                                  aaCATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGcaca                                                                                                                                                                                                       >  6:502865/1‑148 (MQ=255)
                                                                                                                                                                                                    cATCGAATCACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTg                                                                                                                                                                                                    >  7:834223/1‑149 (MQ=255)
                                                                                                                                                                                                     aTCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTga                                                                                                                                                                                                   >  7:138150/1‑149 (MQ=255)
                                                                                                                                                                                                      tCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCAATTGat                                                                                                                                    <  2:195835/211‑1 (MQ=255)
                                                                                                                                                                                                       cGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTccc                                                                                                                                                                                                                                                                       >  2:457708/1‑79 (MQ=255)
                                                                                                                                                                                                       cGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGc                                                                                                                                                                                                                                                >  3:117360/1‑102 (MQ=255)
                                                                                                                                                                                                        gAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGaa                                                                                                                                                                                                >  8:215005/1‑149 (MQ=255)
                                                                                                                                                                                                         aaTAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGaa                                                                                                                                                                                                <  5:277357/148‑1 (MQ=255)
                                                                                                                                                                                                         aaTAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGaa                                                                                                                                                                                                <  6:191089/148‑1 (MQ=255)
                                                                                                                                                                                                           tAACTCGTANCGCCNATTCTTACTTTTCCGCCTTCACANATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACaa                                                                                                                                                                                <  4:724141/162‑1 (MQ=255)
                                                                                                                                                                                                           tAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACg                                                                                                                                                                                              >  6:834998/1‑148 (MQ=255)
                                                                                                                                                                                                             aCTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTga                                                                                                                                                                                           <  7:40235/149‑1 (MQ=255)
                                                                                                                                                                                                               tCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTgaga                                                                                                                                                                                         >  7:584918/1‑149 (MQ=255)
                                                                                                                                                                                                               tCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTgag                                                                                                                                                                                          >  5:594467/1‑148 (MQ=255)
                                                                                                                                                                                                                cGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTGCCCCGCAACATTCAATTCTGtt                                                                                                                                                                                                                                                    <  5:72713/89‑1 (MQ=255)
                                                                                                                                                                                                                  tAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATAc                                                                                                                                                                                      <  8:124050/149‑1 (MQ=255)
                                                                                                                                                                                                                    aCGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACt                                                                                                                                                                                     >  5:868622/1‑148 (MQ=255)
                                                                                                                                                                                                                      gCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCa                                                                                                                                                                                                                                    >  8:685949/1‑99 (MQ=255)
                                                                                                                                                                                                                            tCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTg                                                                                                                                                                             <  5:325459/148‑1 (MQ=255)
                                                                                                                                                                                                                              ttACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGtat                                                                                                                                                                          >  7:474792/1‑149 (MQ=255)
                                                                                                                                                                                                                               tACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGtat                                                                                                                                                                          <  5:178746/148‑1 (MQ=255)
                                                                                                                                                                                                                                aCTTTTCCGCCTTCACAAATACCGCCACTCAAACAGATCGGCATTTTTCTTCCCCGCAACATTCAGTTTTATTTTGCGTGCCTGCTCCAGATTTTTCGATGTTTTTTTTCTCATCTCACTGAGAACTTCAGATACTCACAACTGtatat                                                                                                                                                                        >  8:355234/1‑149 (MQ=255)
                                                                                                                                                                                                                                 cTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGtatata                                                                                                                                                                       <  7:611645/149‑1 (MQ=255)
                                                                                                                                                                                                                                   tttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATaa                                                                                                                                                                      <  5:633722/148‑1 (MQ=255)
                                                                                                                                                                                                                                    ttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATaaa                                                                                                                                                                     <  6:807351/148‑1 (MQ=255)
                                                                                                                                                                                                                                       cGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATAc                                                                                                                                                                  <  6:100123/148‑1 (MQ=255)
                                                                                                                                                                                                                                       cGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACa                                                                                                                                                                 <  8:292705/149‑1 (MQ=255)
                                                                                                                                                                                                                                        gCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTcc                                                                                                                                                                                                                                     <  7:635623/80‑1 (MQ=255)
                                                                                                                                                                                                                                         ccTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAg                                                                                                                                                                >  5:394909/1‑148 (MQ=255)
                                                                                                                                                                                                                                            tCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCa                                                                                                                                                                                                            <  2:581769/101‑1 (MQ=255)
                                                                                                                                                                                                                                               caAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAg                                                                                                                                                          >  5:55868/1‑148 (MQ=255)
                                                                                                                                                                                                                                               caAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGa                                                                                                                                                         <  7:92528/149‑1 (MQ=255)
                                                                                                                                                                                                                                                aaatgccgctctgtttgagtggcggcatttTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGttttt                                                                                                                                                                                                                   <  7:781268‑M2/60‑1 (MQ=255)
                                                                                                                                                                                                                                                aaatgccgctctgtttgagtggcggcatttTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGAt                                                                                                                                                        >  8:156452‑M2/31‑149 (MQ=255)
                                                                                                                                                                                                                                                   TGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGAttt                                                                                                                                                      <  6:32254‑M1/148‑1 (MQ=255)
                                                                                                                                                                                                                                                      CGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTActt                                                                                                                                                  >  8:837245‑M1/1‑149 (MQ=255)
                                                                                                                                                                                                                                                        CCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGttttt                                                                                                                                                                                                                   <  1:115746‑M1/82‑1 (MQ=255)
                                                                                                                                                                                                                                                           cTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTActttcttt                                                                                                                                             <  8:758537/149‑1 (MQ=255)
                                                                                                                                                                                                                                                           cTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTActttctt                                                                                                                                              <  5:443334/148‑1 (MQ=255)
                                                                                                                                                                                                                                                               aaCAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCa                                                                                                                                          >  6:904152/1‑148 (MQ=255)
                                                                                                                                                                                                                                                                aCAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCAAt                                                                                                                                        <  7:215005/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                   gagCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGCTTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATa                                                                                                                                                                   >  4:569553/1‑119 (MQ=255)
                                                                                                                                                                                                                                                                   gagCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCAATTg                                                                                                                                      <  5:829920/148‑1 (MQ=255)
                                                                                                                                                                                                                                                                      cggcatttTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTcaca                                                                                                                                                                                 >  1:142898‑M2/9‑102 (MQ=255)
                                                                                                                                                                                                                                                                      cggcatttTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTc                                                                                                                                                                                    >  2:769274‑M2/9‑99 (MQ=255)
                                                                                                                                                                                                                                                                      cggcatttTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCAATTGata                                                                                                                                   <  6:625957‑M2/140‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gcatttTTCTTCCCCGCAACATTCAATTCTGATTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCAATTGATATc                                                                                                                                 >  6:746843‑M2/7‑148 (MQ=255)
                                                                                                                                                                                                                                                                         catttTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACg                                                                                                                                                                                              >  4:493321‑M2/6‑86 (MQ=255)
                                                                                                                                                                                                                                                                          atttTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGcc                                                                                                                                                                                                              <  4:223517‑M2/65‑1 (MQ=255)
                                                                                                                                                                                                                                                                          atttTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTgag                                                                                                                                                                                                  <  1:195151‑M2/77‑1 (MQ=255)
                                                                                                                                                                                                                                                                           tttTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCAATTGATATCACAt                                                                                                                             >  7:876642‑M2/4‑149 (MQ=255)
                                                                                                                                                                                                                                                                           tttTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCAATTGATATCACAt                                                                                                                             >  8:881633‑M2/4‑149 (MQ=255)
                                                                                                                                                                                                                                                                             tTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCAATTGATATCACATg                                                                                                                            >  6:402326‑M2/2‑148 (MQ=255)
                                                                                                                                                                                                                                                                              ttcttcCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGtata                                                                                                                                                                         >  1:27673/1‑102 (MQ=255)
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                            
GCCTCGAAGCGCATGTCAAAGAGACCTACAACATTCTGAAGAAAAAAGAAGCGGTTGGTCGTCGTCTGGATTTTATGATGCAGGAGTTCAACCGCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCAATTGATATCACATGGAGTGGGCAATGAACGAACATCATCAACCTTTTGAAGAGATAAAACTGATTAATGCAAACGGAGCAGAACAATGGTCAGCAAGACAACTTGGGAAACTACTGGGTTATTCAGAGTATCGTCA  >  NC_000913/3817334‑3817872

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.