New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	24134 =	119 (1.200)	6 (0.060)	6/242	NT	5.6%	coding (1744/2817 nt)	ileS	isoleucyl‑tRNA synthetase
	?	NC_000913	24176 =	91 (0.980)					coding (1786/2817 nt)	ileS	isoleucyl‑tRNA synthetase

GTTGATGCCACCCACAGACGCAGAATATCCGCGCCCAGTTTGTTCATCACATCCTGCGGCGAAACGGTATTGCCGATGGATTTAGACATCTTGCGGCCCTGACCATCCACGGTAAAGCCGTGGGTCAGTACCTGACGATACGGCGCTTTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/24285‑24134 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctttaccGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCTGCGTCTGTGGGTGGCATCAACCGACTACACCGGTGAAATGGCCGTTTCTGACGA  >  NC_000913/24176‑24318                                                                                                                                                                                                                                                                                                         GTTGATGCCACCCACAGACGCAGAATATCCGCGCCCAGTTTGTTCATCACATCCTGCGGCGAAACGGTATTGCCGATGGATTTAGACATCTTGCGGCCCTGACCATCCACGGTAAAGCCGTGGGTCAGTACCTGACGATACGGCGCTTT                                                                                                                                                    >  3:604433/1‑149   TGATGCCACCCACAGACGCAGAATATCCGCGCCCAGTTTGTTCATCACATCCTGCGGCGAAACGGTATTGCCGATGGATTTAGACATCTTGCGGCCCTGACCATCCACGGTAAAGCCGTGGGTCAGTACCTGACGATACGGCGCTTTAC                                                                                                                                                  <  3:18276/149‑1   TGATGCCACCCACAGACGCAGAATATCCGCGCCCAGTTTGTTCATCACATCCTGCGGCGAAACGGTATTGCCGATGGATTTAGACATCTTGCGGCCCTGACCATCCACGGTAAAGCCGTGGGTCAGTACCTGACGATACGGCGCTTTAC                                                                                                                                                  <  3:117888/149‑1    GATGCCACCCACAGACGCAGAATATCCGCGCCCAGTTTGTTCATCACATCCTGCGGCGAAACGGTATTGCCGATGGATTTAGACATCTTGCGGCCCTGACCATCCACGGTAAAGCCGTGGGTCAGTACCTGACGATACGGCGCTTTACC                                                                                                                                                 <  3:495725/149‑1     ATGCCACCCACAGACGCAGAATATCCTCGCCCAATTTGTCCATCACATCCTGCGGCGAAACGGTATTGCCGATGGATTTATACAGCTTGCGGCCCTGACCATCCACGCTAAATCCGTGGGACAGTACCTGATGATACGGCGCATTACC                                                                                                                                                 <  2:526745/148‑1     ATGCCACCCACAGACGCAGAATATCCGCGCCCAGTTTGTTCATCACATCCTGCGGCGAAACGGTATTGCCGATGGATTTAGACATCTTGCGGCCCTGACCATCCACGGTAAAGCCGTGGGTCAGTACCTGACGATACGGCGCTTTACC                                                                                                                                                 <  1:296797/148‑1                                                                                                             ACGGTAAAGCCGTGGGTCAGTACCTGACGATACGGCGCTTTACCGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCTG                                                       <  3:737706/134‑1                                                                                                             ACGGTAAAGCCGTGGGTCAGTACCTGACGATACGGCGCTTTACCGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCTG                                                       >  4:737706/1‑134                                                                                                              CGGTAAAGCCGTGGGTCAGTACCTGACGATACGGCGCTTTACCGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCT                                                        >  2:214725/1‑132                                                                                                              CGGTAAAGCCGTGGGTCAGTACCTGACGATACGGCGCTTTACCGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCT                                                        <  1:214725/132‑1                                                                                                                     GCCGTGGGTCAGTACCTGACGATACG‑‑GCTTTACCGTGGATGGTCAGGGCCGCAAGCTGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCTGC                                                      >  3:702280/1‑125                                                                                                                     GCCGTGGGTCAGTACCTGACGATACG‑‑GCTTTACCGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCTGC                                                      <  4:702280/125‑1                                                                                                                                                   TTTACCGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCTGCGTCTGTGGGTGGCATCAACCGACTACACCGGTGAAATGGCCGTTTCTGACGA  <  3:233647/149‑1                                                                                                                                                   TTTACCGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCTGCGTCTGTGGGTGGCATCAACCGACTACACCGGTGAAATGGCCGTTTCTGACGA  >  3:447576/1‑149                                                                                                                                                   TTTACCGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCTGCGTCTGTGGGTGGCATCAACCGACTACACCGGTGAAATGGCCGTTTCTGACGA  <  3:499953/149‑1                                                                                                                                                   TTTACCGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCTGCGTCTGTGGGTGGCATCAACCGACTACACCGGTGAAATGGCCGTTTCTGACGA  >  4:233647/1‑149                                                                                                                                                   TTTACCGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCTGCGTCTGTGGGTGGCATCAACCGACTACACCGGTGAAATGGCCGTTTCTGACG   <  2:314522/148‑1                                                                                                                                                   TTTACCGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGAGCGGATATTATGCGTCTGTGGGTGGCATCAACCGACTACACCGGTGAAATGGCCGTTTCTGACGt  >  4:676055/1‑148                                                                                                                                                                                                                                                                                                         GTTGATGCCACCCACAGACGCAGAATATCCGCGCCCAGTTTGTTCATCACATCCTGCGGCGAAACGGTATTGCCGATGGATTTAGACATCTTGCGGCCCTGACCATCCACGGTAAAGCCGTGGGTCAGTACCTGACGATACGGCGCTTTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/24285‑24134 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctttaccGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCTGCGTCTGTGGGTGGCATCAACCGACTACACCGGTGAAATGGCCGTTTCTGACGA  >  NC_000913/24176‑24318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.