New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	412077 =	74 (0.750)	7 (0.080)	7/242	NT	9.0%	coding (405/1185 nt)	araJ	L‑arabinose‑inducible putative transporter, MFS family
	?	NC_000913	412119 =	72 (0.780)					coding (363/1185 nt)	araJ	L‑arabinose‑inducible putative transporter, MFS family

TCGTCGCGAATATCTGGCACCCAAAAATAGACCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGC  >  NC_000913/411931‑412224                                                                                                                                                   |                                                                                                                                                      ttctggtggcgttgtgcgtcattggcaacgccatgttcacgctctcttcgtcttacctgatgctcgccattggtcggctggtatccggctttccgcatggcgcattttttggcgtcggagcgatcgtgttatcaaaaattatcaaaccc                                                                                                                                                     >  4:369476‑M1/147‑149 (MQ=255) tcgtcgCGAATATCTGGCACCCAAAAATAGACCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATccc                                                                                                                                                     <  3:880643/149‑1 (MQ=255)  tctggtggcgttgtgcgtcattggcaacgccatgttcacgctctcttcgtcttacctgatgctcgccattggtcggctggtatccggctttccgcatggcgcattttttggcgtcggagcgatcgtgttatcaaaaattatcaaaCCCg                                                                                                                                                    <  3:829914‑M1/4‑1 (MQ=255)       tggcgttgtgcgtcattggcaacgccatgttcgcgctctcttcgtcttacctgatgctcgccattggtcggctggtatccggctttccgcatggcgcattttttggcgtcggagcgatcgtgttatcaaaaattatcaaaCCCGGaaa                                                                                                                                                >  1:570674‑M1/141‑148 (MQ=255)       tggcgttgtgcgtcattggcaacgccatgttcacgctctcttcgtcttacctgatgctcgccattggtcggctggtatccggctttccgcatggcgcattttttggcgtcggagcgatcgtgttatcaaaaattatcaaaCCCGGaaa                                                                                                                                                >  2:194447‑M1/141‑148 (MQ=255)          atatCTGGCACCCAAAAATAGACCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑Ca                                                                                                                                           >  1:346642/1‑148 (MQ=255)               tGGCACCCAAAAATAGACCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATcccc                                                                                                                                      <  1:610440/148‑1 (MQ=255)                        aaaaTAGACCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCAcggcg                                                                                                                             >  1:204177/1‑148 (MQ=255)                              gACCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTg                                                                                                                       >  2:860033/1‑148 (MQ=255)                               aCCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGAc                                                                                                                     <  4:17961/149‑1 (MQ=255)                                catgttcacgctctcttcgtcttacctgatgctcgccattggtcggctggtatccggctttccgcatggcgcattttttggcgtcggagcgatcgtgttatcaaaaattatcaaaCCCGGAAAAGTCATCCCCGCCACGGCGGCGGTg                                                                                                                       >  1:377569‑M1/116‑148 (MQ=255)                                       acgctctcttcgtcttacctgatgctcgccattggtcggctggtatccggctttccgcatggcgcattttttggcgtcggagcgatcgtgttatcaaaaattatcaaaCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCgg                                                                                                             >  4:154439‑M1/109‑149 (MQ=255)                                        aTCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCggg                                                                                                            >  3:153525/1‑149 (MQ=255)                                         tCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCggg                                                                                                            >  2:455248/1‑148 (MQ=255)                                          ctctcttcgtcttacctgatgctcgccattggtcggctggtatccggctttccgcatggcgcattttttggcgtcggagcgatcgtgttatcaaaaattatcaaaCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGtt                                                                                                          >  3:745500‑M1/106‑149 (MQ=255)                                          cACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGt                                                                                                           <  2:311983/148‑1 (MQ=255)                                          cACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGt                                                                                                           >  1:385170/1‑148 (MQ=255)                                          cACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGt                                                                                                           <  1:255341/148‑1 (MQ=255)                                             tcttcgtcttacctgatgctcgccattggtcggctggtatccggctttccgcatggcgcattttttggcgtcggagcgatcgtgttatcaaaaattatcaaaCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACt                                                                                                                    >  4:570306‑M1/103‑136 (MQ=255)                                             tcttcgtcttacctgatgctcgccattggtcggctggtatccggctttccgcatggcgcattttttggcgtcggagcgatcgtgttatcaaaaattatcaaaCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACt                                                                                                                    <  3:570306‑M1/34‑1 (MQ=255)                                                 atatTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAt                                                                                                   <  4:202866/149‑1 (MQ=255)                                                    ttAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAtttt                                                                                                >  4:60261/1‑149 (MQ=255)                                                     tAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAtttt                                                                                                <  1:725307/148‑1 (MQ=255)                                                       aaaaCAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTg                                                                                              >  2:523560/1‑148 (MQ=255)                                                       aaaaCAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTg                                                                                              <  2:204177/148‑1 (MQ=255)                                                       aaaaCAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGa                                                                                             >  3:457909/1‑149 (MQ=255)                                                         aaCAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CAt                                                                                                                                          >  1:889024/1‑102 (MQ=255)                                                         aaCAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CAt                                                                                                                                          <  2:889024/102‑1 (MQ=255)                                                         aaCAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAtttt                                                                                                <  3:707403/144‑1 (MQ=255)                                                         aaCAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAtttt                                                                                                >  4:707403/1‑144 (MQ=255)                                                          aCAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATaa                                                                                          <  3:717493/149‑1 (MQ=255)                                                           cAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATaa                                                                                          >  2:556318/1‑148 (MQ=255)                                                            aGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAaca                                                                                        <  4:145328/149‑1 (MQ=255)                                                             gCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAaca                                                                                        <  1:886220/148‑1 (MQ=255)                                                               gATCAATAAAAGGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAaca                                                                                        >  3:726707/1‑146 (MQ=255)                                                               gATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAaca                                                                                        <  4:726707/146‑1 (MQ=255)                                                                 tCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTg                                                                                              >  1:209118/1‑138 (MQ=255)                                                                 tCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTg                                                                                              <  2:209118/138‑1 (MQ=255)                                                                 tCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGAt                                                                                    <  2:346642/148‑1 (MQ=255)                                                                  cAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATc                                                                                   >  1:62495/1‑148 (MQ=255)                                                                    aTAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGc                                                                                 >  1:619541/1‑148 (MQ=255)                                                                     tAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTc                                                                               >  4:256473/1‑149 (MQ=255)                                                                      aaaaaGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTc                                                                               >  1:288908/1‑148 (MQ=255)                                                                         aaGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGa                                                                            >  2:213894/1‑148 (MQ=255)                                                                          tcggctggtatccggctttccgcatggcgcattttttggcgtcggagcgatcgtgttatcaaaaattatcaaaCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACtt                                                                                                                   <  3:817373‑M1/35‑1 (MQ=255)                                                                          tcggctggtatccggctttccgcatggcgcattttttggcgtcggagcgatcgtgttatcaaaaattatcaaaCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACtt                                                                                                                   >  4:817373‑M1/74‑108 (MQ=255)                                                                          aGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGa                                                                                             <  3:456666/130‑1 (MQ=255)                                                                          aGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGa                                                                                             >  4:456666/1‑130 (MQ=255)                                                                            gtgtAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGcc                                                                        >  3:697166/1‑149 (MQ=255)                                                                                aaCGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGtt                                                                                                          >  1:775893/1‑111 (MQ=255)                                                                                aaCGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGtt                                                                                                          <  2:775893/111‑1 (MQ=255)                                                                                   gCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCaaaaaa                                                                  <  2:288908/148‑1 (MQ=255)                                                                                       gCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATgcg                                                              <  2:148748/148‑1 (MQ=255)                                                                                          aaaTTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCAt                                                          >  4:301638/1‑149 (MQ=255)                                                                                           aaTTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACCGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATg                                                         >  3:607719/1‑149 (MQ=255)                                                                                            aTTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATg                                                         >  1:557004/1‑148 (MQ=255)                                                                                             ttCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCg                                                       >  4:150253/1‑149 (MQ=255)                                                                                                     ttAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAtttt                                                                                                >  4:695021/1‑100 (MQ=255)                                                                                                     ttAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAAtttt                                                                                                <  3:695021/100‑1 (MQ=255)                                                                                                     ttAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGcc                                                <  2:557004/148‑1 (MQ=255)                                                                                                      tAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATc                                                                                                                                         >  1:123587/1‑58 (MQ=255)                                                                                                      tAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATc                                                                                                                                         <  2:123587/58‑1 (MQ=255)                                                                                                      tAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCg                                               >  1:16403/1‑148 (MQ=255)                                                                                                      tAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCg                                               >  2:288522/1‑148 (MQ=255)                                                                                                       aaaTACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCgg                                              <  2:385170/148‑1 (MQ=255)                                                                                                       aaaTACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGa                                             <  3:301638/149‑1 (MQ=255)                                                                                                       aaaTACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGa                                             <  4:153525/149‑1 (MQ=255)                                                                                                             gTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAg                                       >  4:246822/1‑149 (MQ=255)                                                                                                               tCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGc                                      <  2:16403/148‑1 (MQ=255)                                                                                                                       gAATGCCCATCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATg                             <  3:763355/149‑1 (MQ=255)                                                                                                                              cAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAACCCGGATACCAGCCGACCAATGGCGAGc                       >  1:242562/1‑148 (MQ=255)                                                                                                                               aGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCa                      >  1:599501/1‑148 (MQ=255)                                                                                                                                gCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGa                                                                                             <  4:663573/76‑1 (MQ=255)                                                                                                                                gCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGa                                                                                             >  3:663573/1‑76 (MQ=255)                                                                                                                                gCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCAt                     <  2:321842/148‑1 (MQ=255)                                                                                                                                gCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATc                    >  3:739078/1‑149 (MQ=255)                                                                                                                                 cAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATc                    >  2:62873/1‑148 (MQ=255)                                                                                                                                 cAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATc                    <  1:213894/148‑1 (MQ=255)                                                                                                                                 cAAATTGGCGACCGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCa                   <  4:607719/149‑1 (MQ=255)                                                                                                                                    aTTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAgg                 >  1:687818/1‑148 (MQ=255)                                                                                                                                    aTTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAgg                 >  2:187346/1‑148 (MQ=255)                                                                                                                                      tGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTaa              <  3:60261/149‑1 (MQ=255)                                                                                                                                          gACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACg          >  4:829914/1‑149 (MQ=255)                                                                                                                                           aCTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACg          >  2:449624/1‑148 (MQ=255)                                                                                                                                           aCTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACg          >  1:868056/1‑148 (MQ=255)                                                                                                                                            cTGTAATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGTCGAGCATCAGGTAAGACGa         <  2:687818/148‑1 (MQ=255)                                                                                                                                                cATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAagaga    >  3:189654/1‑149 (MQ=255)                                                                                                                                                 aTCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAagagag   >  3:655453/1‑149 (MQ=255)                                                                                                                                                 aTCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAagagag   >  3:491294/1‑149 (MQ=255)                                                                                                                                                   CCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGc  >  2:619541‑M1/1‑148 (MQ=255)                                                                                                                                                   CCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGc  <  1:8856‑M1/148‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                      TCGTCGCGAATATCTGGCACCCAAAAATAGACCGATGCCATCACCGCAATATTAAAAACAGCGATCAATAAAAAGGTGTAACGCCAGCTAAATTCCTGACTTAAATACGTTCCCAGCGGAATGCCCAGCAAATTGGCGACTGTCATCCCGGAAAC‑‑CATCCCCGCCACGGCGGCGGTGACTTTTCCGGGTTTGATAATTTTTGATAACACGATCGCTCCGACGCCAAAAAATGCGCCATGCGGAAAGCCGGATACCAGCCGACCAATGGCGAGCATCAGGTAAGACGAAGAGAGC  >  NC_000913/411931‑412224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.