BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3817574 =	350 (3.540)	17 (0.180)	10/240	NT	5.0%	intergenic (+35/‑186)	yicC/dinD	UPF0701 family protein/DNA damage‑inducible protein
*	?	NC_000913	3817604 =	322 (3.500)	17 (0.180)	10/240	NT	5.0%	intergenic (+65/‑156)	yicC/dinD	UPF0701 family protein/DNA damage‑inducible protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 414 total aligned reads displayed.

GCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGAT  >  NC_000913/3817427‑3817722

 cgAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACaa                                                                                                                                                     >  2:678334/1‑148 (MQ=255)

 cgAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACaa                                                                                                                                                     >  1:468172/1‑148 (MQ=255)

 atgtgatatcaattgcaaagaaagtaaatctgtaactgtatttatatacagttgtgagtatctcacgttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaaaa                                                                                                                                                    >  4:881633‑M1/147‑149 (MQ=255)

 atgtgatatcaattgcaaagaaagtaaatctgtaactgtatttatatacagttgtgagtatctcacgttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaaaa                                                                                                                                                    >  4:306275‑M1/147‑149 (MQ=255)

  gAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACaaa                                                                                                                                                    <  2:207231/148‑1 (MQ=255)

  gAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACaaa                                                                                                                                                    <  2:16026/148‑1 (MQ=255)

   gtgatatcaattgcaaagaaagtaaatctgtaactgtatttatatacagttgtgagtatctcacgttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAAt                                                                                                                                                   <  2:728435‑M1/4‑1 (MQ=255)

     tCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATgnc                                                                                                                                                <  3:260093/149‑1 (MQ=255)

      cGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATgcc                                                                                                                                                >  1:165371/1‑148 (MQ=255)

       tatcaattgcaaagaaagtaaatctgtaactgtatttatatacagttgtgagtatctcacgttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAATgccg                                                                                                                                               <  2:625957‑M1/8‑1 (MQ=255)

        aaCACTCTTGCGTCGAAGACTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTGACGCCAATTCTTACTTTTCCGCCTTCACAAATgccgcc                                                                                                                                             >  4:69193/1‑149 (MQ=255)

         acacTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATgccgcc                                                                                                                                             >  2:872490/1‑148 (MQ=255)

             tctTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAAt                                                                                                                                                   <  4:279707/138‑1 (MQ=255)

              ctTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCa                                                                                                                                        >  2:405943/1‑148 (MQ=255)

               ttGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCaaa                                                                                                                                      <  4:103805/149‑1 (MQ=255)

               ttGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCaa                                                                                                                                       <  1:639292/148‑1 (MQ=255)

                tGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCaaa                                                                                                                                      >  2:564797/1‑148 (MQ=255)

                    tCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACagag                                                                                                                                 >  4:625102/1‑149 (MQ=255)

                     cGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACagag                                                                                                                                 <  1:277590/148‑1 (MQ=255)

                      aagtaaatctgtaactgtatttatatacagttgtgagtatctcacgttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAATGCC‑‑‑ACTCAAACAGAGCGGc                                                                                                                             >  1:615538‑M1/126‑148 (MQ=255)

                        aGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGc                                                                                                                             >  4:242869/1‑149 (MQ=255)

                            tATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGTGCGGCAtt                                                                                                                          >  2:785777/1‑148 (MQ=255)

                            tATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCAttt                                                                                                                         >  3:120427/1‑149 (MQ=255)

                            tATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCAttt                                                                                                                         >  3:859569/1‑149 (MQ=255)

                            tATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCAtt                                                                                                                          <  1:860843/148‑1 (MQ=255)

                            atctgtaactgtatttatatacagttgtgagtatctcacgttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAATGCCGCCACTCAAACAGAGCGGCAtt                                                                                                                          >  2:32997‑M1/120‑148 (MQ=255)

                             tctgtaactgtatttatatacagttgtgagtatctcacgttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAATGCCGCCACTCAAACAGAGCGGCAttt                                                                                                                         >  2:255369‑M1/119‑148 (MQ=255)

                               cAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTttc                                                                                                                      <  4:166185/149‑1 (MQ=255)

                                 aTGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTttct                                                                                                                     <  1:412902/148‑1 (MQ=255)

                                  tGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTttcttc                                                                                                                   <  3:710323/149‑1 (MQ=255)

                                    ccGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTcc                                                                                                                  <  2:492394/148‑1 (MQ=255)

                                      gAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCg                                                                                                               >  4:387840/1‑149 (MQ=255)

                                            aCAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATgc                                                                                                                                                 <  3:3305/109‑1 (MQ=255)

                                             cAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACAtt                                                                                                        <  3:647414/149‑1 (MQ=255)

                                             cAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACAt                                                                                                         <  2:270818/148‑1 (MQ=255)

                                             cAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACAt                                                                                                         >  2:754402/1‑148 (MQ=255)

                                             cAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACGCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCTGCATTTTTCTTCCCCGCAACAt                                                                                                         >  2:520559/1‑148 (MQ=255)

                                              aaaCTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTc                                                                                                       >  4:152199/1‑149 (MQ=255)

                                              aaaCTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTc                                                                                                       >  4:79272/1‑149 (MQ=255)

                                               aaCTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTc                                                                                                       >  1:263123/1‑148 (MQ=255)

                                                aCTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCa                                                                                                      <  1:226488/148‑1 (MQ=255)

                                                 cTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAAt                                                                                                    <  3:900654/149‑1 (MQ=255)

                                                   ccGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTcc                                                                                                                  <  4:416747/133‑1 (MQ=255)

                                                       cATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGtt                                                                                              >  3:884492/1‑149 (MQ=255)

                                                          cGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTg                                                                                           <  3:181128/149‑1 (MQ=255)

                                                             gCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTcc                                                                                                                  >  4:123837/1‑123 (MQ=255)

                                                               tcacgttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAATGCCGCCACTCAAACAGAGCGGCATTTttc                                                                                                                      >  3:608083‑M1/85‑117 (MQ=255)

                                                                gAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCAtttt                                                                                                                        >  1:588298/1‑114 (MQ=255)

                                                                 aaaGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAGACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGcc                                                                                     <  2:781152/148‑1 (MQ=255)

                                                                 aaaGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGcc                                                                                     <  1:793434/148‑1 (MQ=255)

                                                                  aaGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTg                                                                                   >  4:529213/1‑149 (MQ=255)

                                                                       ttgattgaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTcc                                                                               <  1:391724/148‑1 (MQ=255)

                                                                         gattgaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGa                                                                            <  3:385166/149‑1 (MQ=255)

                                                                               gCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGc                                                                      <  3:281130/149‑1 (MQ=255)

                                                                                 aGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCg                                                                     >  2:381665/1‑148 (MQ=255)

                                                                                  gATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGa                                                                    >  2:35846/1‑148 (MQ=255)

                                                                                       aaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAATGCCGCCACTCAAACAGAGCGGCAttt                                                                                                                         >  4:781268‑M1/61‑90 (MQ=255)

                                                                                          aGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGAtttt                                                                        <  2:602310/136‑1 (MQ=255)

                                                                                          aGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGttttttt                                                           <  3:209466/149‑1 (MQ=255)

                                                                                                 tCAGAGCATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAg                                                     >  2:647367/1‑148 (MQ=255)

                                                                                                 tCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAg                                                     >  1:685417/1‑148 (MQ=255)

                                                                                                 tCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAg                                                     >  1:373546/1‑148 (MQ=255)

                                                                                                  cAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGc                                                    <  1:337342/148‑1 (MQ=255)

                                                                                                   aGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGcac                                                  >  3:794639/1‑149 (MQ=255)

                                                                                                   aGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGcac                                                  >  3:837245/1‑149 (MQ=255)

                                                                                                    gAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGcc                                                        <  4:647700/142‑1 (MQ=255)

                                                                                                    gAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGcac                                                  >  2:837248/1‑148 (MQ=255)

                                                                                                     aaCATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCacac                                                >  3:758537/1‑149 (MQ=255)

                                                                                                      aCATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACt                                               >  3:533274/1‑149 (MQ=255)

                                                                                                        aTCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTga                                             >  3:138150/1‑149 (MQ=255)

                                                                                                          cGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTgag                                            <  1:77699/148‑1 (MQ=255)

                                                                                                            aaTAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGaa                                          <  2:191089/148‑1 (MQ=255)

                                                                                                              tAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACg                                        <  2:695905/148‑1 (MQ=255)

                                                                                                               aaCTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTg                                      >  4:577331/1‑149 (MQ=255)

                                                                                                               aaCTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTg                                      <  4:341750/149‑1 (MQ=255)

                                                                                                                aCTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTga                                     <  3:625102/149‑1 (MQ=255)

                                                                                                                aCTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTga                                     <  3:577331/149‑1 (MQ=255)

                                                                                                                aCTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTga                                     <  3:40235/149‑1 (MQ=255)

                                                                                                                  tCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGttttt                                                             >  4:461515/1‑123 (MQ=255)

                                                                                                                  tCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCacac                                                <  4:194278/136‑1 (MQ=255)

                                                                                                                  tCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTgaga                                   >  3:508190/1‑149 (MQ=255)

                                                                                                                  tCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTgaga                                   <  4:600698/149‑1 (MQ=255)

                                                                                                                  tCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTgag                                    <  1:457069/148‑1 (MQ=255)

                                                                                                                       aCGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACt                               >  1:868622/1‑148 (MQ=255)

                                                                                                                         gCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGGCTGCTCCAGATTTTGCGATGt                                                                 <  4:845905/112‑1 (MQ=255)

                                                                                                                         gCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTga                                     >  4:710614/1‑140 (MQ=255)

                                                                                                                               tCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTg                       <  1:325459/148‑1 (MQ=255)

                                                                                                                                 ttACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGtat                    >  3:474792/1‑149 (MQ=255)

                                                                                                                                  tACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGtat                    >  1:728435/1‑148 (MQ=255)

                                                                                                                                     ttttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTga                                     >  3:436877/1‑128 (MQ=255)

                                                                                                                                      tttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGtatatat                >  1:807351/1‑147 (MQ=255)

                                                                                                                                      tttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATaa                >  2:30158/1‑148 (MQ=255)

                                                                                                                                      tttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATaa                >  1:100123/1‑148 (MQ=255)

                                                                                                                                       ttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATaaa               >  1:700964/1‑148 (MQ=255)

                                                                                                                                       ttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATaaa               <  2:807351/148‑1 (MQ=255)

                                                                                                                                           gCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTcc                                                                               <  3:635623/80‑1 (MQ=255)

                                                                                                                                                  caAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAg    <  1:207159/148‑1 (MQ=255)

                                                                                                                                                  caAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAg    <  1:901208/148‑1 (MQ=255)

                                                                                                                                                  caAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAg    >  1:55868/1‑148 (MQ=255)

                                                                                                                                                   AAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGAt  <  3:663757‑M1/149‑1 (MQ=255)

GCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGAT  >  NC_000913/3817427‑3817722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.