New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3828038 =283 (2.860)4 (0.040) 4/248 NT 1.5% coding (628/1206 nt) gltS glutamate transporter
?NC_000913 3828072 = 269 (2.830)coding (594/1206 nt) gltS glutamate transporter
Rejected: Frequency below/above cutoff threshold.

Only 100 of 332 total aligned reads displayed.

GGTCGGCAGTTCAAAAGCAGTGCCAGCCAAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGAAGCCATAACGTTCAA  >  NC_000913/3827925‑3828220
                                                                                                                                                   |                                                                                                                                                    
  tCGGCAGTTCAAAAGCAGTGCCAGCCAAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTc                                                                                                                                                    >  2:365770/1‑148 (MQ=255)
  tCGGCAGTTCAAAAGCAGTGCCAGCCAAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTc                                                                                                                                                    <  1:696869/148‑1 (MQ=255)
  tCGGCAGTTCAAAAGCAGTGCCAGCCAAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTc                                                                                                                                                    >  1:596488/1‑148 (MQ=255)
   cGGCAGTTCAAAAGCAGTGCCAGCCAAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTcc                                                                                                                                                   <  2:324425/148‑1 (MQ=255)
     gCAGTTCAAAAGCAGTGCCAGCCAAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCt                                                                                                                                                  >  4:525912/1‑147 (MQ=255)
     gCAGTTCAAAAGCAGTGCCAGCCAAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCt                                                                                                                                                  <  3:525912/147‑1 (MQ=255)
          tCAAAAGCAGTGCCAGCCAAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCAt                                                                                                                                            >  2:882958/1‑148 (MQ=255)
             aaaGCAGTGCCAGCCAAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAACCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCg                                                                                                                                         >  2:645784/1‑148 (MQ=255)
              aaGCAGTGCCAGCCAAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGa                                                                                                                                       <  4:219517/149‑1 (MQ=255)
                 cAGTGCCAGCCAAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAAt                                                                                                                                     <  2:319375/148‑1 (MQ=255)
                      tctggtgctgggcggcttgattggcggtccggtggcgcgctatctggtgaaacactccaccacgccgaacggtattccggatgaccaggaaGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTcc                                                                                                                                                   >  4:276345‑M1/92‑129 (MQ=255)
                          ccaAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCgg                                                                                                                            <  1:824048/148‑1 (MQ=255)
                           caAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGc                                                                                                                           >  1:215576/1‑148 (MQ=255)
                           caAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCg                                                                                                                          >  3:432521/1‑149 (MQ=255)
                            aaaaGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCgt                                                                                                                         >  3:729938/1‑149 (MQ=255)
                            aaaaGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCg                                                                                                                          >  2:165973/1‑148 (MQ=255)
                                gTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCgtggtg                                                                                                                     <  4:83667/149‑1 (MQ=255)
                                 ttGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCgtggtg                                                                                                                     <  2:618403/148‑1 (MQ=255)
                                  tGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGtggtgg                                                                                                                    >  1:873761/1‑148 (MQ=255)
                                   gcgcAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGa                                                                                                                   <  1:768409/148‑1 (MQ=255)
                                    cgcAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAg                                                                                                                  <  1:501258/148‑1 (MQ=255)
                                    cgcAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAg                                                                                                                  <  2:453645/148‑1 (MQ=255)
                                      caacaaTTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAgtgt                                                                                                               <  4:869041/149‑1 (MQ=255)
                                      caacaaTTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAgtg                                                                                                                >  2:209883/1‑148 (MQ=255)
                                       aacaaTTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAgt                                                                                                                 <  4:137853/146‑1 (MQ=255)
                                        acaaTTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGtt                                                                                                              >  1:904643/1‑148 (MQ=255)
                                        acaaTTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGtt                                                                                                              >  1:228679/1‑148 (MQ=255)
                                         caaTTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCgtgg                                                                                                                       >  4:754599/1‑138 (MQ=255)
                                           aTTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCAc                                                                                                          <  3:769208/149‑1 (MQ=255)
                                           aTTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCCATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCa                                                                                                           >  2:658149/1‑148 (MQ=255)
                                            ttttCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTGATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCAcc                                                                                                         >  3:587452/1‑149 (MQ=255)
                                                  ccACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCa                                                                                                           >  1:460249/1‑141 (MQ=255)
                                                  ccACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATa                                                                                                    >  2:584497/1‑148 (MQ=255)
                                                  ccACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAg                                                                                                   >  4:709043/1‑149 (MQ=255)
                                                  ccACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAg                                                                                                   >  4:691174/1‑149 (MQ=255)
                                                       gTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAgcgcgc                                                                                              <  4:329460/149‑1 (MQ=255)
                                                          aGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCAc                                                                                           >  4:538820/1‑149 (MQ=255)
                                                           ggCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCAcc                                                                                          <  3:351693/149‑1 (MQ=255)
                                                             cAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTACTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCg                                                                                         >  1:100075/1‑148 (MQ=255)
                                                                aTAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGAcc                                                                                     >  3:674418/1‑149 (MQ=255)
                                                                  aGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCg                                                                                    <  2:724309/148‑1 (MQ=255)
                                                                   gCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGc                                                                                   >  1:18097/1‑148 (MQ=255)
                                                                     aaTCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCaa                                                                                >  4:697563/1‑149 (MQ=255)
                                                                     aaTCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCaa                                                                                >  3:702226/1‑149 (MQ=255)
                                                                          gcgcGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCaa                                                                            >  2:786728/1‑148 (MQ=255)
                                                                           cgcgATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAgc                                                                          >  4:479758/1‑149 (MQ=255)
                                                                                    gtCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGc                                                                  >  1:430256/2‑148 (MQ=255)
                                                                                     tCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCa                                                                 >  1:784790/1‑148 (MQ=255)
                                                                                         tCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTc                                                                                                                                              <  4:256264/67‑1 (MQ=255)
                                                                                         tCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCa                                                                                                           >  3:488596/1‑102 (MQ=255)
                                                                                         tCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAg                                                             <  1:628690/148‑1 (MQ=255)
                                                                                          cAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGAc                                                           >  3:623448/1‑149 (MQ=255)
                                                                                           aGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGAc                                                           >  2:230189/1‑148 (MQ=255)
                                                                                             cACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGa                                                        >  3:229999/1‑149 (MQ=255)
                                                                                                 aaCGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACg                                                     <  1:363946/148‑1 (MQ=255)
                                                                                                 aaCGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGt                                                    >  3:162503/1‑149 (MQ=255)
                                                                                                  aCGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGtt                                                   >  3:205840/1‑149 (MQ=255)
                                                                                                        tGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGAACCAGACCGAACGTTGcaca                                              <  1:655624/148‑1 (MQ=255)
                                                                                                          aTCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGGGTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGc                                           >  4:577143/1‑149 (MQ=255)
                                                                                                           tCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGc                                           <  2:430256/148‑1 (MQ=255)
                                                                                                           caggaagtcccgacggcgtttgaaaagccggatgtgggacTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGcc                                          >  4:286326‑M2/41‑149 (MQ=255)
                                                                                                            cATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCa                                         <  3:236091/149‑1 (MQ=255)
                                                                                                            aggaagtcccgacggcgtttgaaaagccggatgtgggacTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCa                                         >  4:784452‑M2/40‑149 (MQ=255)
                                                                                                             aTGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAAc                                                      <  3:128982/135‑1 (MQ=255)
                                                                                                               gCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCg                                      >  3:839712/1‑149 (MQ=255)
                                                                                                                cGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCAcc                                                                                                         <  2:849526/81‑1 (MQ=255)
                                                                                                                cGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCg                                      >  2:665092/1‑148 (MQ=255)
                                                                                                                  TCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCa                                   >  3:710213‑M1/1‑149 (MQ=255)
                                                                                                                   CCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCa                                   <  2:218045‑M1/148‑1 (MQ=255)
                                                                                                                   CCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCa                                   <  2:195774‑M1/148‑1 (MQ=255)
                                                                                                                    CCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCAc                                  >  2:822278‑M1/1‑148 (MQ=255)
                                                                                                                    CCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACt                                 <  4:394251‑M1/149‑1 (MQ=255)
                                                                                                                        aTCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTGGCACAGGCCATCGCCACTTCCg                             >  3:553570/1‑149 (MQ=255)
                                                                                                                          ccGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTc                               <  1:666172/145‑1 (MQ=255)
                                                                                                                          ccGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGt                            >  2:896411/1‑148 (MQ=255)
                                                                                                                          ccGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGt                            >  2:14888/1‑148 (MQ=255)
                                                                                                                            ggCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGATGGAGTGTTTCTCCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGc                         >  4:625426/1‑149 (MQ=255)
                                                                                                                             gCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGc                         >  1:244963/1‑148 (MQ=255)
                                                                                                                              cTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCa                        >  2:567324/1‑148 (MQ=255)
                                                                                                                              cTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGCAATAGCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCAt                       <  4:587452/149‑1 (MQ=255)
                                                                                                                               ttttCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCAtt                      >  3:274532/1‑149 (MQ=255)
                                                                                                                                    aaaCGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGa                 <  4:878514/149‑1 (MQ=255)
                                                                                                                                     aaCGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGaa                <  4:170851/149‑1 (MQ=255)
                                                                                                                                     aaCGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGaa                <  3:876565/149‑1 (MQ=255)
                                                                                                                                     aaCGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGa                 >  1:147693/1‑148 (MQ=255)
                                                                                                                                     aaCGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGa                 >  1:72083/1‑148 (MQ=255)
                                                                                                                                     aaCGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGa                 <  2:756175/148‑1 (MQ=255)
                                                                                                                                      aCGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGAAg               <  3:278014/149‑1 (MQ=255)
                                                                                                                                      aCGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGAAg               <  3:753093/149‑1 (MQ=255)
                                                                                                                                       cGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAgc                                                                          <  2:280648/89‑1 (MQ=255)
                                                                                                                                       cGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAgc                                                                          >  1:280648/1‑89 (MQ=255)
                                                                                                                                       cGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGAAg               >  2:770575/1‑148 (MQ=255)
                                                                                                                                          cGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGAAGCCa            <  2:261810/148‑1 (MQ=255)
                                                                                                                                          cGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGAAGCCAt           <  3:804591/149‑1 (MQ=255)
                                                                                                                                           tgtgggacTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGAAGCCATa          <  3:286326‑M2/141‑1 (MQ=255)
                                                                                                                                            tCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGAAGCCATa          >  1:640428/1‑148 (MQ=255)
                                                                                                                                             cGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGAAGCCATaa         <  2:503944/148‑1 (MQ=255)
                                                                                                                                                gacTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGAAGCCATAACGtt     <  4:671286‑M2/146‑1 (MQ=255)
                                                                                                                                                   ttCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGAAGCCATAACGTTCaa  <  4:233091/149‑1 (MQ=255)
                                                                                                                                                   ttCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGAAGCCATAACGTTCa   <  1:567324/148‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GGTCGGCAGTTCAAAAGCAGTGCCAGCCAAAAGTTGCGCAACAATTTTCCCCACCGTCAGGCAGATAGCAATCAGCGCGATAGTTTCAATCAGCACCAACGAGGTGATCATGCGTCCCACATCCGGCTTTTCAAACGCCGTCGGGACTTCCTGGTCATCCGGAATACCGTTCGGCGTGGTGGAGTGTTTCACCAGATAGCGCGCCACCGGACCGCCAATCAAGCCGCCCAGCACCAGACCGAACGTTGCACAGGCCATCGCCACTTCCGTCGCATTGGTGAAGCCATAACGTTCAA  >  NC_000913/3827925‑3828220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.