New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3950444 =213 (1.060)8 (0.040) 7/272 NT 3.7% intergenic (+24/‑63) ilvL/ilvX ilvG operon leader peptide/uncharacterized protein
?NC_000913 3950470 = 211 (1.110)intergenic (+50/‑37) ilvL/ilvX ilvG operon leader peptide/uncharacterized protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 243 total aligned reads displayed.

CGCATCATAAAAATCGGCCAAAAAATATCTTGTACTATTTACAAAACCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTATGCCGACATGAGCAGGGTGCGGCAATGG  >  NC_000913/3950224‑3950716
                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                
cGCATCATAAAAATCGGCCAAAAAATATCTTGTACTATTTACAAAACCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCgagg                                                                                                                                                                                                                            >  2:137518/1‑275 (MQ=255)
                                           aaaCCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCg                                                                                                                                                                                                                                                              <  4:171024/198‑1 (MQ=255)
                                                                   ttCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACGGCACAAAATTCTGTTTCTCAAGTTTAAGGACGGGAAATTAACTATGAAt                                                                                                                                                         >  2:299938/1‑275 (MQ=255)
                                                                   ttCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCa                                                                                                                                                                                      <  4:41993/246‑1 (MQ=255)
                                                                     ccTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGa                                                                                                                                                                                                                >  2:247239/1‑218 (MQ=255)
                                                                        aaacggtgttcacaccctgtgcccgcaacgcatgtaccacccactgtgcgccattcatagttagttccccgtcctgaatcttgagaaacagaattttgtgctgttattcattgtctgctcctcggttatgtttttaaggtcaaaaaaaa                                                                                                                                                                                                                                                                                  >  8:1023902‑M1/149‑149 (MQ=255)
                                                                        aaacggtgttcacaccctgtgcccgcaacgcatgtaccacccactgtgcgccattcatagttagttccccgtcctgaatcttgagaaacagaattttgtgctgttattcattgtctgctcctcggttatgtttttaaggtcaaaaaaaa                                                                                                                                                                                                                                                                                  >  6:1011711‑M1/149‑149 (MQ=255)
                                                                           cggtgttcacaccctgtgcccgcaacgcatgtaccacccactgtgcgccattcatagttagttccccgtcctgaatcttgagaaacagaattttgtgctgttattcattgtctgctcctcggttatgtttttaaggtcaaaaaaaAccc                                                                                                                                                                                                                                                                               >  6:638526‑M1/146‑149 (MQ=255)
                                                                           aaCAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGAccc                                                                                                                                                                                                                                                                               >  8:246093/1‑149 (MQ=255)
                                                                                gATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCa                                                                                                                                                                                                                                                                          >  8:512022/1‑149 (MQ=255)
                                                                                    cAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAc                                                                                                                                                                           <  4:225167/240‑1 (MQ=255)
                                                                                             aCAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCgg                                                                                                                                                                                                                                                             <  5:801567/149‑1 (MQ=255)
                                                                                               aaaaTGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCCCCGAAAGGTCCgggg                                                                                                                                                                                                                                                           <  7:1409114/149‑1 (MQ=255)
                                                                                                  aTGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGtt                                                                                                                                                                                                                                                        >  6:564644/1‑149 (MQ=255)
                                                                                                       aGCCCTTTTACGAGTGATTAGCCTTGTCGTGATTAGCGTGGTGGTTATTATTATCCCACCGTGCGGGGCTTCACTTGGACGAGGAAAGGCTTAGATATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAg                                                                                                                     <  1:45013/275‑1 (MQ=255)
                                                                                                       aGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGttttttt                                                                                                                                                                                                                                                   >  7:1011714/1‑149 (MQ=255)
                                                                                                        gCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGGACCTTTCGGTGCGGGGGtcttagtt                                                                                                                                                                                                                                                  <  6:919683/149‑5 (MQ=255)
                                                                                                        gCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGtttttttt                                                                                                                                                                                                                                                  <  6:75495/149‑1 (MQ=255)
                                                                                                        gCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGtttttttt                                                                                                                                                                                                                                                  <  5:406511/149‑1 (MQ=255)
                                                                                                        gCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGtttttttt                                                                                                                                                                                                                                                  <  5:699446/149‑1 (MQ=255)
                                                                                                          ccTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGa                                                                                                                                                                                                                                                <  5:1112514/149‑1 (MQ=255)
                                                                                                           cTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGAc                                                                                                                                                                                                                                               <  5:157748/149‑1 (MQ=255)
                                                                                                           cTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGAc                                                                                                                                                                                                                                               >  6:970171/1‑149 (MQ=255)
                                                                                                            ttCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGAcc                                                                                                                                                                                                                                              >  5:466370/1‑149 (MQ=255)
                                                                                                             tCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgg                                                                                                                                                                         >  2:115954/1‑217 (MQ=255)
                                                                                                                  gAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTaaaa                                                                                                                                                                                                                                        >  5:1188658/1‑149 (MQ=255)
                                                                                                                   aGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTaaaaa                                                                                                                                                                                                                                       <  8:658521/149‑1 (MQ=255)
                                                                                                                     tGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAATGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACa                                                                                                                                                                                                                                     >  8:886044/1‑149 (MQ=255)
                                                                                                                          ccattcatagttagttccccgtcctgaatcttgagaaacagaattttgtgctgttattcattgtctgctcctcggttatgtttttaaggtcaaaaaaaACCCCCGCACCGAAAGGTCCgggg                                                                                                                                                                                                                                                           >  6:412623‑M1/99‑122 (MQ=255)
                                                                                                                          aGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAAcc                                                                                                                                                                                                                                <  8:1014109/149‑1 (MQ=255)
                                                                                                                           gCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCg                                                                                                                                                                                                                               >  6:1047535/1‑149 (MQ=255)
                                                                                                                            ccTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCga                                                                                                                                                                                                                              >  6:822230/1‑149 (MQ=255)
                                                                                                                                 tCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGAcc                                                                                                                                                                                                                                              <  7:1239130/128‑1 (MQ=255)
                                                                                                                                        tAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAAt                                                                                                                                                                                                                  <  7:820190/149‑1 (MQ=255)
                                                                                                                                            gtggtggtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAAt                                                                                                                                                                                                              <  5:1128997/149‑1 (MQ=255)
                                                                                                                                               gtggtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCa                                                                                                                                                                                                                        <  5:655564/136‑1 (MQ=255)
                                                                                                                                               gtggtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCa                                                                                                                                                                                                                        >  6:655564/1‑136 (MQ=255)
                                                                                                                                               gtggtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgg                                                                                                                                                                         <  4:90573/183‑1 (MQ=255)
                                                                                                                                                tggtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACa                                                                                                                                                                                                          >  7:773621/1‑149 (MQ=255)
                                                                                                                                                  gtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGc                                                                                                                                                                                                        <  5:970171/149‑1 (MQ=255)
                                                                                                                                                  gtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGc                                                                                                                                                                                                        >  6:330785/1‑149 (MQ=255)
                                                                                                                                                     attattATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGGTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGcaca                                                                                                                                                                                                     >  6:285473/1‑149 (MQ=255)
                                                                                                                                                        attatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACaaaa                                                                                                                                                                                                  >  7:1151106/1‑149 (MQ=255)
                                                                                                                                                           tcaccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCAAGGAGCAGACAATGAATAACAGCACAAAATTc                                                                                                                                                                                               >  7:233755/4‑149 (MQ=255)
                                                                                                                                                            tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGTGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCAGGGGTTTTTTTTGa                                                                                                                                                                                                                                                <  7:105265/99‑1 (MQ=255)
                                                                                                                                                             cccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTg                                                                                                                                                                                             <  7:512022/149‑1 (MQ=255)
                                                                                                                                                              ccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt                                                                                                                                                                                            >  7:1171650/1‑149 (MQ=255)
                                                                                                                                                              ccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt                                                                                                                                                                                            >  5:52695/1‑149 (MQ=255)
                                                                                                                                                               cACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGtt                                                                                                                                                                                           >  8:79282/1‑149 (MQ=255)
                                                                                                                                                               cACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGtt                                                                                                                                                                                           >  5:602302/1‑149 (MQ=255)
                                                                                                                                                                aCCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGttt                                                                                                                                                                                          >  8:1315072/1‑149 (MQ=255)
                                                                                                                                                                 ccGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCgg                                                                                                                           >  4:265202/1‑211 (MQ=255)
                                                                                                                                                                       ggggCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGa                                                                                                                                                                                   <  7:79282/149‑1 (MQ=255)
                                                                                                                                                                        gggCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCg                                                                                                                                                                                                                                                              <  3:25122/73‑1 (MQ=255)
                                                                                                                                                                        gggCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGAt                                                                                                                                                                                  <  5:1366899/149‑1 (MQ=255)
                                                                                                                                                                        gggCTGCACTTGGACGAGGAAACGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTGTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATg                                                                           <  1:1709/252‑1 (MQ=255)
                                                                                                                                                                          gCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTAt                                                                                                                                                             <  4:123235/168‑1 (MQ=255)
                                                                                                                                                                           cTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGAACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcgg                                                 <  2:224004/275‑1 (MQ=255)
                                                                                                                                                                            tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAg                                                                                                                                                                              >  8:1228771/1‑149 (MQ=255)
                                                                                                                                                                            ctgttattcattgtctgctcctcggttatgtttttaaggtcaaaaaaaACCCCCGCACCGAAAGGTCCGGGGGtt                                                                                                                                                                                                                                                        >  5:876896‑M1/49‑75 (MQ=255)
                                                                                                                                                                            ctgttattcattgtctgctcctcggttatgttattaaggtcaaaaaaaACCCCCGCACCGAAAGGTCCGGGGGtt                                                                                                                                                                                                                                                        <  6:876896‑M1/27‑1 (MQ=255)
                                                                                                                                                                             gCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg                                                                                                                                                                             >  7:443603/1‑149 (MQ=255)
                                                                                                                                                                             gCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg                                                                                                                                                                             >  5:252082/1‑149 (MQ=255)
                                                                                                                                                                              cACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcggc                                                >  2:76504/1‑273 (MQ=255)
                                                                                                                                                                               aCTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAc                                                                                                                                                                           >  8:1425158/1‑149 (MQ=255)
                                                                                                                                                                               aCTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAc                                                                                                                                                                           >  7:908411/1‑149 (MQ=255)
                                                                                                                                                                                cTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACg                                                                                                                                                                          >  7:981535/1‑149 (MQ=255)
                                                                                                                                                                                 ttGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCTCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgg                                                                                                                                                                         >  6:1365500/1‑149 (MQ=255)
                                                                                                                                                                                   ggACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAGACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgggg                                                                                                                                                                       >  8:823574/1‑149 (MQ=255)
                                                                                                                                                                                   ggACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgggg                                                                                                                                                                       >  7:48488/1‑149 (MQ=255)
                                                                                                                                                                                     aCGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgg                                                                                                                                                                         <  5:311233/145‑1 (MQ=255)
                                                                                                                                                                                      cGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaac                                                                                                                                                                    <  6:548720/149‑1 (MQ=255)
                                                                                                                                                                                       gAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaact                                                                                                                                                                   >  6:1394996/1‑149 (MQ=255)
                                                                                                                                                                                         ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTATAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaa                                                                                                                                                                 >  8:956379/1‑149 (MQ=255)
                                                                                                                                                                                          gAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAGGGGGaacaaac                                                                                                                                                                >  5:1071008/1‑149 (MQ=255)
                                                                                                                                                                                          gAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaac                                                                                                                                                                >  5:869846/1‑149 (MQ=255)
                                                                                                                                                                                          gAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaac                                                                                                                                                                >  6:911713/1‑149 (MQ=255)
                                                                                                                                                                                          gAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaac                                                                                                                                                                <  8:1119367/149‑1 (MQ=255)
                                                                                                                                                                                           aaaGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaact                                                                                                                                                               <  5:634003/149‑1 (MQ=255)
                                                                                                                                                                                           aaaGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGAATTTTTTGACCTTAAAAACATAACCGATGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaact                                                                                                                                                               >  6:1185907/1‑149 (MQ=255)
                                                                                                                                                                                               gCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGGCCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGa                                                                                                                                                           >  6:1127826/1‑149 (MQ=255)
                                                                                                                                                                                                cTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGaa                                                                                                                                                          <  6:602302/149‑1 (MQ=255)
                                                                                                                                                                                                 ttAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAAt                                                                                                                                                         >  8:617918/1‑149 (MQ=255)
                                                                                                                                                                                                 ttAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAAAAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAAt                                                                                                                                                         >  6:20216/1‑149 (MQ=255)
                                                                                                                                                                                                  tAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACGGAAAGGTCCGGGGGTTGTTTTTGACCTTAAAAACATAGCCGAGGAGCAGAGAATGAATAACAGCACAAAATTCTGTGTCTCAAAATTCAGGACGGGGAACTAACTATGAATg                                                                                                                                                        <  7:1359291/149‑1 (MQ=255)
                                                                                                                                                                                                   agagATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATgg                                                                                                                                                       <  6:80957/149‑1 (MQ=255)
                                                                                                                                                                                                    gagaTCAAGCCTTAATGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGgc                                                                                                                                                      <  7:886044/149‑1 (MQ=255)
                                                                                                                                                                                                    gagaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGgc                                                                                                                                                      <  8:1352471/149‑1 (MQ=255)
                                                                                                                                                                                                    gagaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAAAAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGgc                                                                                                                                                      >  6:1451913/1‑149 (MQ=255)
                                                                                                                                                                                                          aaGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAg                                                                                                                                                >  7:26014/1‑149 (MQ=255)
                                                                                                                                                                                                          aaGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAg                                                                                                                                                >  7:702932/1‑149 (MQ=255)
                                                                                                                                                                                                             ccTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAgtgg                                                                                                                                             >  7:1279644/1‑149 (MQ=255)
                                                                                                                                                                                                              cTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAgtggg                                                                                                                                            <  8:404168/149‑1 (MQ=255)
                                                                                                                                                                                                               ttAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCgg                                                                                                                           >  3:55552/1‑165 (MQ=255)
                                                                                                                                                                                                                tAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACa                                                                                                                                                                                                          >  6:1318459/1‑85 (MQ=255)
                                                                                                                                                                                                                tAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACa                                                                                                                                                                                                          <  5:1318459/85‑1 (MQ=255)
                                                                                                                                                                                                                        tAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGCATAACAGCACAAAATTCTGTTTCTCAAGTTTCAGGTCGGGGAACAAACTATGAATGGCGCACAGTGGGTGGTACATGc                                                                                                                                  >  8:137739/1‑149 (MQ=255)
                                                                                                                                                                                                                          aGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGt                                                                                                                                >  6:681538/1‑149 (MQ=255)
                                                                                                                                                                                                                            ACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTg                                                                                                                              <  6:249344‑M1/149‑1 (MQ=255)
                                                                                                                                                                                                                            ACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTg                                                                                                                              >  7:193664‑M1/1‑149 (MQ=255)
                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                
CGCATCATAAAAATCGGCCAAAAAATATCTTGTACTATTTACAAAACCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTATGCCGACATGAGCAGGGTGCGGCAATGG  >  NC_000913/3950224‑3950716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.