New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3721045 =253 (1.260)521 (2.620) 216/284 NT 69.7% noncoding (413/1443 nt) IS150 repeat region
?NC_000913 = 3839774 202 (1.020)coding (220/819 nt) nlpA cytoplasmic membrane lipoprotein‑28

Only 100 of 791 total aligned reads displayed.

CCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAAGGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTACCTGACTATAGCGGTAAGGTC  >  NC_000913/3839505‑3840039
                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                         
cccTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAAGGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTACAAGAAAGGGTGGAGGCGGGAAAACATTACAATCAGGTTCGCCATGATTTGTCGAATCtttattgg                                                                                                                                                                                                                                                                      >  4:103666/1‑270 (MQ=255)
                                                     cgcgACCAAGGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCCAGAAAGGGTCGATGCTGGACGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgacccagaaaaacaggcatcagccttggagctgtcaaaagcc                                                                                                                                                                                                                 <  4:237508‑M2/275‑59 (MQ=255)
                                                                         tcgTTGGGGATCCCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACACGCCATAGGCAAACCAAACGTATTTCTCACTGTTACCAGATCATAACCATGCGCCTCATTATTTGGTCAAAGACATGTGCGATGCTCGCAGCCACTACCCTCACGTTCGCCATGATTTGTCGCATCGTTCGGTACCAACGAACCGCTAGACCCTCACAGTCCAAAATCCATGCCATATTTCTCTTCTCCATCCttttttccctcttt                                                                                                                                                                                             >  4:92392/1‑266 (MQ=255)
                                                                                   tCGCCACTGTCGCGCCTTCTTTTATTGGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATc                                                                                                                                                                                    <  2:255419/274‑1 (MQ=255)
                                                                                                                         ttGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACTATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGtt                                                                                                                                                                                                                                                                           >  6:1156495/1‑149 (MQ=255)
                                                                                                                          tGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTc                                                                                                                                                                                                                                                                          <  6:895316‑M2/149‑2 (MQ=255)
                                                                                                                           gATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTca                                                                                                                                                                                                                                                                         >  5:988888‑M2/1‑147 (MQ=255)
                                                                                                                           gATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTca                                                                                                                                                                                                                                                                         <  6:1293179‑M2/149‑3 (MQ=255)
                                                                                                                            aTTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcat                                                                                                                                                                                                                                                                        <  6:966557‑M2/149‑4 (MQ=255)
                                                                                                                             tttttttGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcatt                                                                                                                                                                                                                                                                       <  7:498163‑M2/149‑5 (MQ=255)
                                                                                                                                 tttGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgatgatcttgaaagtcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagcct                                                                                                                                     <  2:157582‑M2/275‑135 (MQ=255)
                                                                                                                                 tttGGAATAACCCGCCAGAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatccgcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttaagtaacaaaaaaagctgaaagcct                                                                                                                                     <  4:166278‑M2/275‑135 (MQ=255)
                                                                                                                                      aaTAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatca                                                                                                                                                                                                                                                              <  7:1381684‑M2/149‑14 (MQ=255)
                                                                                                                                       aTAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcag                                                                                                                                                                                                                                                             <  8:1204386‑M2/149‑15 (MQ=255)
                                                                                                                                         aaCCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagtt                                                                                                                                                                                                                                                           >  8:1129995‑M2/1‑133 (MQ=255)
                                                                                                                                                    gggAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGAAGCAACGAACCGCTAAATCCTAc                                                                                                                                                                                                                                                <  7:1195382/149‑1 (MQ=255)
                                                                                                                                                       aaGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACGTTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagc                                                                                                                                                                                                                                             <  8:825883‑M2/149‑31 (MQ=255)
                                                                                                                                                          aCAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcag                                                                                                                                                                                                                                                             <  6:1421508‑M2/130‑15 (MQ=255)
                                                                                                                                                          aCAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgaaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcatcccacgaaaaagtgaaa                                                                                                            <  4:334489‑M2/275‑160 (MQ=255)
                                                                                                                                                          aCAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACg                                                                                                                                                                                                                                                                <  4:130734/127‑1 (MQ=255)
                                                                                                                                                            aaaCGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatcc                                                                                                                                                                                                                                                      >  8:1250932‑M2/1‑114 (MQ=255)
                                                                                                                                                              aCGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatca                                                                                                                                                                                                                                      >  6:329186‑M2/1‑112 (MQ=255)
                                                                                                                                                              aCGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTAATGTGTTTTTCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGa                                                                                                        >  2:292905/1‑275 (MQ=255)
                                                                                                                                                              aCGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTAATGTGTTTTGCATCGCTGCTActc                                                                                                                             <  2:126041/254‑1 (MQ=255)
                                                                                                                                                               cGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcag                                                                                                                                                                                                                                     <  7:1257019‑M2/149‑39 (MQ=255)
                                                                                                                                                                 tATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGaa                                                                                                                                                                                                                                                              >  8:1057929/1‑122 (MQ=255)
                                                                                                                                                                  aattCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGa                                                                                                                                                                                                                                  >  6:164064/3‑149 (MQ=255)
                                                                                                                                                                  aTTTCCCACCGCTGCCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcat                                                                                                                                                                                                                                  >  6:629652‑M2/1‑108 (MQ=255)
                                                                                                                                                                  aTTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcat                                                                                                                                                                                                                                  >  8:498163‑M2/1‑108 (MQ=255)
                                                                                                                                                                   tttCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcatt                                                                                                                                                                                                                                 <  7:805633‑M2/149‑43 (MQ=255)
                                                                                                                                                                      cccACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattgga                                                                                                                                                                                                                              <  7:624937‑M2/149‑46 (MQ=255)
                                                                                                                                                                      cccACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattgga                                                                                                                                                                                                                              >  8:869103‑M2/1‑104 (MQ=255)
                                                                                                                                                                      cccACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattgga                                                                                                                                                                                                                              >  5:1045918‑M2/1‑104 (MQ=255)
                                                                                                                                                                        cACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagc                                                                                                                                                                                                                            <  6:41755‑M2/149‑48 (MQ=255)
                                                                                                                                                                         aCCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGTATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCata                                                                                                                                                                                                                           >  7:762582/1‑149 (MQ=255)
                                                                                                                                                                         aCCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagct                                                                                                                                                                                                                           <  5:344195‑M2/149‑49 (MQ=255)
                                                                                                                                                                           cGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCCTCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcatcccacgaaaaagtgaaagtactcaacgagcta                                                                                             <  2:750‑M2/273‑175 (MQ=255)
                                                                                                                                                                           cGCTACCAGTTTATAACCATGCGCCTGATGATCTTGTTCAAGAAAGGTTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatctgtggatccagaaaaagcggcatcagcattggagctgt                                                                                                                                                                                                                         >  6:146307‑M2/1‑99 (MQ=255)
                                                                                                                                                                           cGCTACCAGTTTATAACCAGGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATGTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgt                                                                                                                                                                                                                         >  5:408407‑M2/1‑99 (MQ=255)
                                                                                                                                                                              tACCTGGTTATAACCATGCGCCTGGTTATCTTGTTCAAGAAAGGGGCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcatttcattatcagttgatccagaaaaagcgacatcagcattggagccgtcaa                                                                                                                                                                                                                      <  6:703473‑M2/149‑54 (MQ=255)
                                                                                                                                                                                ccAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaa                                                                                                                                                                                                                    >  5:1449556‑M2/1‑94 (MQ=255)
                                                                                                                                                                                 cAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGc                                                                                                                                                                                                                                                          >  7:350104/1‑110 (MQ=255)
                                                                                                                                                                                  aGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaaga                                                                                                                                                                                                                  >  8:680671‑M2/1‑92 (MQ=255)
                                                                                                                                                                                   gTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTc                                                                                                                                                                                                                                          >  5:512905/1‑124 (MQ=255)
                                                                                                                                                                                   gTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTc                                                                                                                                                                                                                                          <  6:512905/124‑1 (MQ=255)
                                                                                                                                                                                      tataACAATGGTCCTGTTTATCTTGTTNNAGAAAGGGTAGAGGCTGGAAGACATTGGCANCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagntgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcatcccacgaaaaagtgaaagtactcaacgagctaaggcagtttta                                                                                  >  3:44280‑M2/1‑88 (MQ=255)
                                                                                                                                                                                            cATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcatt                                                                                                                                                                                                        >  7:1219399‑M2/1‑82 (MQ=255)
                                                                                                                                                                                            cATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcatt                                                                                                                                                                                                        >  8:179238‑M2/1‑82 (MQ=255)
                                                                                                                                                                                             aTGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCtttt                                                                                                                                                                                                                 >  8:56475/1‑139 (MQ=255)
                                                                                                                                                                                              tGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCTTCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcatcccacgaaaaagtgaaagtactcaacgagctaaggcagttttatcctcttg                                                                          <  2:226150‑M2/273‑194 (MQ=255)
                                                                                                                                                                                              tGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCttttt                                                                                                                                                                                                      <  6:582014/149‑1 (MQ=255)
                                                                                                                                                                                              tGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTc                                                                                                                                                                              >  4:19612/1‑173 (MQ=255)
                                                                                                                                                                                               gcgcCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcatcccacgaaaaagtgaaagtactcaacgagctaaggcagttttatcctcttgatg                                                                       >  2:101410‑M2/1‑79 (MQ=255)
                                                                                                                                                                                                 gcCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgc                                                                                                                                                                                                                                                                     >  1:19728‑M2/1‑77 (MQ=255)
                                                                                                                                                                                                 gcCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGc                                                                                                                                                                                                   <  6:793558/149‑1 (MQ=255)
                                                                                                                                                                                                   cTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcatcccacgaaaaagtgaaagtactcaacgagctaaggcagttttatcctcttgatgag                                                                     >  2:334489‑M2/1‑75 (MQ=255)
                                                                                                                                                                                                   cTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcatt                                                                                                                                                                                                        >  7:226022‑M2/1‑75 (MQ=255)
                                                                                                                                                                                                   cTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGa                                                                                                                                                                                                 >  7:995440/1‑149 (MQ=255)
                                                                                                                                                                                                     gATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatctt                                                                                                                                                                                               <  5:172485‑M2/149‑77 (MQ=255)
                                                                                                                                                                                                      aTTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttg                                                                                                                                                                                              <  8:1377259‑M2/149‑78 (MQ=255)
                                                                                                                                                                                                         aTCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCcg                                                                                                                                                                                           >  5:628340/1‑149 (MQ=255)
                                                                                                                                                                                                           cTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCcgcg                                                                                                                                                                                         >  8:43237/1‑149 (MQ=255)
                                                                                                                                                                                                              gTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCat                                                                                                                                                                                                                            <  6:1227898/111‑1 (MQ=255)
                                                                                                                                                                                                              gTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCat                                                                                                                                                                                                                            >  5:1227898/1‑111 (MQ=255)
                                                                                                                                                                                                                tCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagt                                                                                                                                                                                    <  6:1028510‑M2/149‑88 (MQ=255)
                                                                                                                                                                                                                  aaGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCtt                                                                                                                                                                                  >  6:750151/1‑149 (MQ=255)
                                                                                                                                                                                                                   aGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcg                                                                                                                                                                                 <  5:1268746‑M2/149‑91 (MQ=255)
                                                                                                                                                                                                                   aGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcg                                                                                                                                                                                 <  6:1366272‑M2/149‑91 (MQ=255)
                                                                                                                                                                                                                   aGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcg                                                                                                                                                                                 <  6:354333‑M2/149‑91 (MQ=255)
                                                                                                                                                                                                                    gAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcga                                                                                                                                                                                >  7:162759‑M2/1‑58 (MQ=255)
                                                                                                                                                                                                                     aaaGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAg                                                                                                                                                                                                                                 >  7:862974/1‑99 (MQ=255)
                                                                                                                                                                                                                        gggTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttc                                                                                                                                                                            >  8:232180‑M2/1‑54 (MQ=255)
                                                                                                                                                                                                                          gTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTgcg                                                                                                                                                                          <  8:626962/149‑1 (MQ=255)
                                                                                                                                                                                                                              aTGCTGGAAGACAGTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcaatggatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcatcccacgaaaaagtgaaagtactcaacgagctaaggcagttttatcctcttgatgagcttctcagggctgcggagataccgcgca                                         >  2:85527‑M2/1‑48 (MQ=255)
                                                                                                                                                                                                                                    gAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaa                                                                                                                                                                                      <  6:1087683‑M2/127‑86 (MQ=255)
                                                                                                                                                                                                                                    gAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaa                                                                                                                                                                                           <  5:26863‑M2/122‑81 (MQ=255)
                                                                                                                                                                                                                                       gACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggctta                                                                                                                                                             >  7:1143112‑M2/1‑39 (MQ=255)
                                                                                                                                                                                                                                          aTTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtc                                                                                                                                                                                                                        >  7:1030714‑M2/1‑36 (MQ=255)
                                                                                                                                                                                                                                           ttCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgta                                                                                                                                                         <  5:723770‑M2/149‑115 (MQ=255)
                                                                                                                                                                                                                                           ttCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgta                                                                                                                                                         <  7:440379‑M2/149‑115 (MQ=255)
                                                                                                                                                                                                                                           ttCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgta                                                                                                                                                         <  5:1317838‑M2/149‑115 (MQ=255)
                                                                                                                                                                                                                                           ttCGCATCAAGTTAGCCATGATTGTTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcatcccacgaaaaagtgaaagtactcaacgagctaaggcagttttatcctcttgatgagcttctcagggctgcggagataccgcgcagtacgttttatta                            >  4:265569‑M2/1‑35 (MQ=255)
                                                                                                                                                                                                                                              gCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatct                                                                                                                                                      >  5:895316‑M2/1‑32 (MQ=255)
                                                                                                                                                                                                                                                aTCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaa                                                                                                                                                    <  5:1163609‑M2/149‑120 (MQ=255)
                                                                                                                                                                                                                                                   aaGTAGGCAATGATTTGTCGCATCGGTcattgcaatataagttgagccagaaaaagcggattaagcattggagcggtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatatctggaaacgctgcttatggaactaaaaaagctgaaagccttagctcatcccacgaaaaagtgaaagtactcaacgagctaaggcagttttatcctcttgatgagcttcgcagggctgcggagataccgcgcagtacgttttattatcatctaa                    >  4:750‑M2/1‑27 (MQ=255)
                                                                                                                                                                                                                                                        cGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcatcccacgaaaaagtgaaagtactcaacgagctaaggcagttttatcctcttgatgagcttctcagggctgcggagataccgcgcagtacgttttattatcatctaaaggct               >  2:195471‑M2/1‑22 (MQ=255)
                                                                                                                                                                                                                                                         gCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctga                                                                                                                                           <  6:267815‑M2/149‑129 (MQ=255)
                                                                                                                                                                                                                                                           cATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaa                                                                                                                                         <  7:930238‑M2/149‑131 (MQ=255)
                                                                                                                                                                                                                                                           cATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaa                                                                                                                                         <  5:801396‑M2/149‑131 (MQ=255)
                                                                                                                                                                                                                                                             tGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagc                                                                                                                                       <  7:673896‑M2/149‑133 (MQ=255)
                                                                                                                                                                                                                                                             tGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagc                                                                                                                                       <  8:764600‑M2/149‑133 (MQ=255)
                                                                                                                                                                                                                                                             tGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagc                                                                                                                                       >  8:96346‑M2/1‑17 (MQ=255)
                                                                                                                                                                                                                                                               aTTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagcct                                                                                                                                     >  8:321870‑M2/1‑15 (MQ=255)
                                                                                                                                                                                                                                                                 ttGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagcctta                                                                                                                                   >  5:465293‑M2/1‑13 (MQ=255)
                                                                                                                                                                                                                                                                       cATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcat                                                                                                                             <  5:950507‑M2/149‑143 (MQ=255)
                                                                                                                                                                                                                                                                        aTCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcatc                                                                                                                            >  7:1080263‑M2/1‑6 (MQ=255)
                                                                                                                                                                                                                                                                        aTCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTAATGTGTTTTGCATCGCTGCTActct                                                                                                                            <  5:323608/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                         tCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTAATGTGTTTTGCATCGCTGCTACTCTg                                                                                                                           <  6:1258256/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                            ttcattgcaatatcagttgatccagaaaaagcggcgtcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcatcccac                                                                                                                        <  5:1375513‑M2/149‑148 (MQ=255)
                                                                                                                                                                                                                                                                            ttcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcatcccac                                                                                                                        <  7:30218‑M2/149‑148 (MQ=255)
                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                         
CCCTTTTCCCTCTTTCAGAGTAATTAGCTTCTCTTTTTGCAACAGTAAAAGTGCGCGACCAAGGTTGGTCGGGTCGTTGGGGATCGCCACTGTCGCGCCTTCTTTTATTTGCGCCACGGTTTTGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGTCGCAACCTGCCAGCAGAATTCCGGCCAGCAATAATGCGGCCCCTGTCCGTAGATGATGTGTTGTCAGTTTCATTTTTTTATCCTTTTATTAATGATTACCTGACTATAGCGGTAAGGTC  >  NC_000913/3839505‑3840039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.