New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4064194 =158 (0.790)4 (0.020) 4/272 NT 2.6% coding (102/693 nt) ompL outer membrane porin L; putative sulpholipid porin
?NC_000913 4064216 = 145 (0.760)coding (80/693 nt) ompL outer membrane porin L; putative sulpholipid porin
Rejected: Frequency below/above cutoff threshold.

Only 100 of 181 total aligned reads displayed.

CCAGATACACTGCACCACCCGAACCGATACTCTTATCATTAATTAAGCCACCGGGCTGGATGGTTAATTTATCGGTTGGTTTAAATAACGGATACCAGCCTTCAATTTCGTTATATCCATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGCCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAAAAGAATCCCATCGTCAATGCAG  >  NC_000913/4063971‑4064490
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                  
         cTGCACCACCCGAACCGATACTCTTATCATTAATTAAGCCACCGGGCTGGATGGTTAATTTATCGGTTGGTTTAAATAACGGATACCAGCCTTCAATTTCGTTATATCCATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCAAACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATTCCTCCCTGTTTTCGACGtc                                                                                                                                                                                                                                                                       >  1:30452/1‑249 (MQ=255)
                                                   cGGGCTGGATGGTTAATTTCTCGGTTGGTTTAAATAACGGATACCAGCCTTCAATTTCGTTATATCCATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGAATTAATCTTTTTCata                                                                                                                                                                                                    >  2:269379/1‑275 (MQ=255)
                                                                                        cGGATACCAGCCTTCAATTTCGTTATATCCATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCa                                                                                                                                                                                                                                                 >  4:118032/1‑193 (MQ=255)
                                                                                                    ttCAATTTCGTTATATCCATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGt                                                                                                                                                                                                                                                                                 >  6:1378276/1‑149 (MQ=255)
                                                                                                    ttCAATTTCGTTATATCCATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGt                                                                                                                                                                                                                                                                                 >  8:1068118/1‑149 (MQ=255)
                                                                                                       aaTTTCGTTATATCCATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGtttt                                                                                                                                                                                                                                                                              >  7:467847/1‑149 (MQ=255)
                                                                                                       aaTTTCGTTATATCCATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGtttt                                                                                                                                                                                                                                                                              >  7:809773/1‑149 (MQ=255)
                                                                                                         tttCGTTATATCCATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCg                                                                                                                                                                                                                                                                            >  6:605644/1‑149 (MQ=255)
                                                                                                          ttCGTTATATCCATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGa                                                                                                                                                                                                                                                                           <  8:223549/149‑1 (MQ=255)
                                                                                                           tCGTTATATCCATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGAc                                                                                                                                                                                                                                                                          <  8:461318/149‑1 (MQ=255)
                                                                                                           tCGTTATATCCATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGAc                                                                                                                                                                                                                                                                          <  8:1373415/149‑1 (MQ=255)
                                                                                                              ttATATCCATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTa                                                                                                                                                                                                                                                                       <  5:779713/149‑1 (MQ=255)
                                                                                                                    ccATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGcc                                                                                                                                                                                                                                                                 <  6:177827/149‑1 (MQ=255)
                                                                                                                    ccATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGcc                                                                                                                                                                                                                                                                 >  5:1149902/1‑149 (MQ=255)
                                                                                                                     cATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCa                                                                                                                                                                                                                                                                <  8:656783/149‑1 (MQ=255)
                                                                                                                      aTGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGGGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAg                                                                                                                                                                                                                                                               >  5:950103/1‑149 (MQ=255)
                                                                                                                      aTGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTc                                                                                                                                                                                                                                                                             <  8:611855/135‑1 (MQ=255)
                                                                                                                          tttAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCaaa                                                                                                                                                                                                                                                           >  5:1115506/1‑149 (MQ=255)
                                                                                                                            tAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATa                                                                                                                                                                                                                                                         <  5:1149670/149‑1 (MQ=255)
                                                                                                                            tAGTTCATCTTCACGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATa                                                                                                                                                                                                                                                         <  8:980415/149‑1 (MQ=255)
                                                                                                                              gTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATAcc                                                                                                                                                                                                                                                       >  5:210925/1‑149 (MQ=255)
                                                                                                                              gTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATAcc                                                                                                                                                                                                                                                       >  5:915506/1‑149 (MQ=255)
                                                                                                                               ttCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGCTTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCg                                                                                                                                                                                                                                                      >  6:500061/1‑149 (MQ=255)
                                                                                                                               ttCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGttt                                                                                                                                                                                                                                                                               >  5:1420276/1‑124 (MQ=255)
                                                                                                                                 cATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAg                                                                                                                                                                                                                                                    <  5:800853/149‑1 (MQ=255)
                                                                                                                                    cttctCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCa                                                                                                                                                                                                                                                 <  8:89613/149‑1 (MQ=255)
                                                                                                                                     ttctCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCag                                                                                                                                                                                                                                                >  7:577257/1‑149 (MQ=255)
                                                                                                                                       ctcGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCagag                                                                                                                                                                                                                                              <  5:1042120/149‑1 (MQ=255)
                                                                                                                                       ctcGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCagag                                                                                                                                                                                                                                              <  6:915506/149‑1 (MQ=255)
                                                                                                                                        tcGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAgg                                                                                                                                                                                                                                             >  7:587963/1‑149 (MQ=255)
                                                                                                                                          gCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTc                                                                                                                                                                                                                                           <  5:343370/149‑1 (MQ=255)
                                                                                                                                                  ttGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGagaaga                                                                                                                                                                                                                                   <  8:15151/149‑1 (MQ=255)
                                                                                                                                                        gTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGt                                                                                                                                                                                                                                            >  5:569107/1‑134 (MQ=255)
                                                                                                                                                        gTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGAtaataa                                                                                                                                                                                                                             >  6:520659/1‑149 (MQ=255)
                                                                                                                                                         tATTGGTGAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATaaa                                                                                                                                                                                                                            >  6:810065/1‑149 (MQ=255)
                                                                                                                                                          aTTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATaaaa                                                                                                                                                                                                                           <  7:115082/149‑1 (MQ=255)
                                                                                                                                                           ttGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAat                                                                                                                                                                                                                          <  5:158184/149‑1 (MQ=255)
                                                                                                                                                             ggTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAatta                                                                                                                                                                                                                        >  5:399012/1‑149 (MQ=255)
                                                                                                                                                              gTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAattat                                                                                                                                                                                                                       <  6:603029/149‑1 (MQ=255)
                                                                                                                                                                   cATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCAt                                                                                                                                                                                                                  >  7:965138/1‑149 (MQ=255)
                                                                                                                                                                      aataCCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTaa                                                                                                                                                                                                               <  6:1141466/149‑1 (MQ=255)
                                                                                                                                                                       ataCCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATAc                                                                                                                                                                                                                                                        <  7:455785/107‑1 (MQ=255)
                                                                                                                                                                       ataCCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAAt                                                                                                                                                                                                              <  5:635086/149‑1 (MQ=255)
                                                                                                                                                                        taCCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGAAATTTATAACGTTACGGAAGCCGTTTTTTCTTCTTTCGCCATCCCTGTAtttt                                                                                >  4:330439/1‑274 (MQ=255)
                                                                                                                                                                          cccGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCtt                                                                                                                                                                                                           >  5:280063/1‑149 (MQ=255)
                                                                                                                                                                           ccGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTACCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGc                                                                                                                                                                                                                                                  <  6:627418/109‑1 (MQ=255)
                                                                                                                                                                             gcgcCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCaga                                                                                                                                                                                                                                        >  5:1380057/1‑117 (MQ=255)
                                                                                                                                                                             gcgcCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCaga                                                                                                                                                                                                                                        <  6:1380057/117‑1 (MQ=255)
                                                                                                                                                                             gcgcCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATCGCGGCTCTTGACATTTATAAAGTTACGGAAGCCGTTTTTTTTTCTTTCGCCATCTCTTTATTTTTGCatt                                                                          >  4:3009/1‑275 (MQ=255)
                                                                                                                                                                                 ccATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCata                                                                                                                                                                                                    >  6:986269/1‑149 (MQ=255)
                                                                                                                                                                                    tatCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGCCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGAt                                                                   <  2:330439/275‑1 (MQ=255)
                                                                                                                                                                                     atCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCAtaataa                                                                                                                                                                                                >  7:906370/1‑149 (MQ=255)
                                                                                                                                                                                      tCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAg                                                                                                                                                                                               <  6:1111156/149‑1 (MQ=255)
                                                                                                                                                                                        gAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGagaaga                                                                                                                                                                                                                                   <  5:359764/111‑1 (MQ=255)
                                                                                                                                                                                        gAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGagaaga                                                                                                                                                                                                                                   >  6:359764/1‑111 (MQ=255)
                                                                                                                                                                                         tctgcctcggtatttgctggcgcatacgtcgaaaacagGGAGGCAAGATTATATGCCTCCCt                                                                                                                                                                                                                                                                                   >  8:1412171‑M1/39‑62 (MQ=255)
                                                                                                                                                                                         tctgcctcggtatttgctggcgcatacgtcgaaaacagGGAGGCAAGATTATATGCCTCCCt                                                                                                                                                                                                                                                                                   <  7:1412171‑M1/24‑1 (MQ=255)
                                                                                                                                                                                            ttATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCAtt                                                                                                                                                                                         >  7:1045552/1‑149 (MQ=255)
                                                                                                                                                                                              ataACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCAtttt                                                                                                                                                                                       >  5:702905/1‑149 (MQ=255)
                                                                                                                                                                                               taACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCAttttt                                                                                                                                                                                      <  6:702905/149‑1 (MQ=255)
                                                                                                                                                                                                 aCCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTa                                                                                                                                                                                    >  8:868463/1‑149 (MQ=255)
                                                                                                                                                                                                   ccACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTaaa                                                                                                                                                                                  <  6:146848/149‑1 (MQ=255)
                                                                                                                                                                                                   ccACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTaaa                                                                                                                                                                                  <  7:1452243/149‑1 (MQ=255)
                                                                                                                                                                                                     acacGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATa                                                                                                                                                                                                                                                         >  7:617564/1‑76 (MQ=255)
                                                                                                                                                                                                        cGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAg                                                                                                                                                                             <  5:986269/149‑1 (MQ=255)
                                                                                                                                                                                                         gTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAgg                                                                                                                                                                            <  6:210925/149‑1 (MQ=255)
                                                                                                                                                                                                           aGCATAAACCCGCCCTGATAGAAGGAAAGATTCTATGCCTCCCTGTTTTCGACGTATGCGCAAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTCCATTCATCTTTTTCATAATAACTCCATTTTTTAAACGTAGGGa                                                                                                                                                                          >  8:204039/1‑149 (MQ=255)
                                                                                                                                                                                                            gCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAattat                                                                                                                                                                                                                       <  5:1068181/103‑1 (MQ=255)
                                                                                                                                                                                                            gCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAattat                                                                                                                                                                                                                       >  6:1068181/1‑103 (MQ=255)
                                                                                                                                                                                                            gCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATCATAAGTCCATTTTTTAAACGTAGGGAg                                                                                                                                                                         <  7:976990/149‑1 (MQ=255)
                                                                                                                                                                                                                aaCCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCag                                                                                                                                                                                                                                         <  7:724723/81‑1 (MQ=255)
                                                                                                                                                                                                                aaCCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCag                                                                                                                                                                                                                                         >  8:724723/1‑81 (MQ=255)
                                                                                                                                                                                                                  ccTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGgccgcc                                                                                                                                                                   >  7:518660/1‑149 (MQ=255)
                                                                                                                                                                                                                   cTCGTCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGcca                                                                                                                                                                  >  5:1259101/1‑149 (MQ=255)
                                                                                                                                                                                                                   cTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGcca                                                                                                                                                                  >  6:820347/1‑149 (MQ=255)
                                                                                                                                                                                                                    tCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAg                                                                                                                                                                                                                                                    >  5:622622/1‑66 (MQ=255)
                                                                                                                                                                                                                    tCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAg                                                                                                                                                                                                                                                    <  6:622622/66‑1 (MQ=255)
                                                                                                                                                                                                                     cGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGccacc                                                                                                                                                                <  5:810065/149‑1 (MQ=255)
                                                                                                                                                                                                                      gCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAg                                                                                                                                                                             >  6:854442/1‑135 (MQ=255)
                                                                                                                                                                                                                      gCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAg                                                                                                                                                                             <  5:854442/135‑1 (MQ=255)
                                                                                                                                                                                                                         cTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCcacccacc                                                                                                                                                            >  5:544351/1‑149 (MQ=255)
                                                                                                                                                                                                                         aaacagggaggcatataatcttgcctccCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCa                                                                                                                                                                                                                   <  8:1037431‑M2/66‑1 (MQ=255)
                                                                                                                                                                                                                         aaacagggaggcatataatcttgcctccCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCa                                                                                                                                                                                                                   >  7:1037431‑M2/29‑94 (MQ=255)
                                                                                                                                                                                                                            aTCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAgg                                                                                                                                                         >  7:29770/1‑149 (MQ=255)
                                                                                                                                                                                                                            aTCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAgg                                                                                                                                                         >  6:141103/1‑149 (MQ=255)
                                                                                                                                                                                                                             tCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGa                                                                                                                                                        <  6:280063/149‑1 (MQ=255)
                                                                                                                                                                                                                              cGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGAt                                                                                                                                                       <  8:1358705/149‑1 (MQ=255)
                                                                                                                                                                                                                              cGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGAt                                                                                                                                                       <  6:329695/149‑1 (MQ=255)
                                                                                                                                                                                                                                  GGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGaa                                                                                                                                                   >  8:1158122‑M1/1‑149 (MQ=255)
                                                                                                                                                                                                                                       gATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGc                                                                                                                                              >  7:552260/1‑149 (MQ=255)
                                                                                                                                                                                                                                         ttATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCgg                                                                                                                                            >  6:1436112/1‑149 (MQ=255)
                                                                                                                                                                                                                                              tgcctccCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTAtt                                                                                                                                       <  6:246448‑M2/142‑1 (MQ=255)
                                                                                                                                                                                                                                               gcctccCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTg                                                                                                                                      >  7:1301370‑M2/7‑149 (MQ=255)
                                                                                                                                                                                                                                               gcctccCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTg                                                                                                                                      <  8:390104‑M2/143‑1 (MQ=255)
                                                                                                                                                                                                                                                cctccCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGa                                                                                                                                     <  7:407315‑M2/144‑1 (MQ=255)
                                                                                                                                                                                                                                                 ctccCTGGTTTCGACGTATACACCTACAAAGACCGAGTCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGAc                                                                                                                                    >  8:776714‑M2/5‑149 (MQ=255)
                                                                                                                                                                                                                                                  tccCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACa                                                                                                                                   <  8:274576‑M2/146‑1 (MQ=255)
                                                                                                                                                                                                                                                  tccCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACa                                                                                                                                   >  6:480696‑M2/4‑149 (MQ=255)
                                                                                                                                                                                                                                                  tccCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACa                                                                                                                                   >  7:1233679‑M2/4‑149 (MQ=255)
                                                                                                                                                                                                                                                   ccCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGCCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAAAAGAATCCCATCGTCAATGc    >  1:8430‑M2/3‑275 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                                                  
CCAGATACACTGCACCACCCGAACCGATACTCTTATCATTAATTAAGCCACCGGGCTGGATGGTTAATTTATCGGTTGGTTTAAATAACGGATACCAGCCTTCAATTTCGTTATATCCATGTTTTAGTTCATCTTCTCGCTGAAAGTTGTAGGTATTGGTTAACATAATACCCGCGCCCATATCGAAGTTATAACCCACACGTAGCATAACCTCGCCCTGATCGGAGGCAAGATTATATGCCTCCCTGTTTTCGACGTATGCGCCAGCAAATACCGAGGCAGAGGTCAGAGAAGATAATAAAATTATTGCATTAATCTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGCCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAAAAGAATCCCATCGTCAATGCAG  >  NC_000913/4063971‑4064490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.