Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 1,543,229 | G→T | 5.4% | L278M (CTG→ATG) | narU ← | nitrate/nitrite transporter |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,543,229 | 0 | G | T | 5.4% | 654.2 / 19.9 | 186 | L278M (CTG→ATG) | narU | nitrate/nitrite transporter |
Reads supporting (aligned to +/- strand): ref base G (94/82); new base T (2/8); total (96/90) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.20e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.18e-01 |
Only 100 of 186 total aligned reads displayed.
GAACCACTTCCCAGACCCGCAGTCAGAAACAGCCCCATAAATACGGCGTAAAAGGCGATGAAATTACCGGAGCCTGTGCCCGGTAAGGTAAGGAACAGCAGGGCACTGAAAATCGCCATAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATCCCTGACCATGCGGCGATCGTGGCAATCGCCAGTAGCGGTACCCAAATCCATGCGGCATTCGCCAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTA > NC_000913/1542967‑1543495 | gAACCACTTCCCAGACCCGCAGTCAGAAACAGCCCCATAAATACGGCGTAAAAGGCGATGAAATTACCGGAGCCTGTGCCCGGTAAGGTAAGGAACAGCAGGGCACTGAAAATCGCCATAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATACGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAAcc > 2:271148/1‑275 (MQ=255) cTTCCCAGACCCGCAGTCAGAAACAGCCCCATAAATACGGCGTAAAAGGCGATGAAATTACCGGAGCCTGTGCCCGGTAAGGTAAGGAACAGCAGGGCACTGAAAATCGCCATAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAACTAGCACCACCAACCGACCGCGCGATGGCACCGAAAAATGGGCCAAAGAACGCCAGGACCAGAATCTTCCCATCCGGGAACTGGG‑TTTTTGCCAGGATGGC‑AAAACCCGCaca > 4:58896/1‑273 (MQ=255) agcagGGCACTGAAAATCGCCATAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGAGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGAAGAAAAACCGATAAACGAACCGAAGGGGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGAAGGAGTTGTAAGACAGGGAGCTGGTAGGCact > 1:33124/1‑273 (MQ=255) gcagGGCACTGAAAATCGCCATAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGGTGAAAGACCGGGGCCTGGTCGGCCAtt > 4:42399/1‑275 (MQ=255) gcagGGCACTGAAAATCGCCATAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCCCAGCCGCCAGAGATGCCAGCGGTGTAAGACAGGGAGCGGGTCGGGAAtt > 4:170842/1‑275 (MQ=255) gcagGGCACTGAAAATCGCCATAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCCCAGCAGCCAGAGCTGCAGGCGTTGGAAGAACGGGAGCTGGGCGCCAAt > 4:56043/1‑274 (MQ=255) cGCCATAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTgg < 2:42399/275‑1 (MQ=255) cATAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCa > 5:15320/1‑149 (MQ=255) aTAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGGTTTTTTGCCAGCa > 8:571790/1‑149 (MQ=255) tAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATg > 5:659338/1‑149 (MQ=255) tAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATg < 6:1441762/149‑1 (MQ=255) aaaaTAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGc > 8:1332514/1‑149 (MQ=255) aaTAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCATGCTGGC‑aa > 7:784930/1‑149 (MQ=255) tAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑aaaa < 6:618973/149‑1 (MQ=255) tAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑aaaa > 6:1192196/1‑149 (MQ=255) tAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑aaaa < 7:1031558/149‑1 (MQ=255) tAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑‑TTTTGCCATGCTGGC‑aaaaa < 6:134372/149‑2 (MQ=255) aaaGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCATGCTGGC‑aaaaa < 5:238393/149‑2 (MQ=255) aaaGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAACAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAAc < 5:1268252/149‑1 (MQ=255) gTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑‑TTTTGCCATGCTGGC‑AAAAaccca < 8:1098635/149‑3 (MQ=255) ttGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGc > 7:307952/1‑149 (MQ=255) ttGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑‑TTTTGCCATGCTGGC‑AAAAacccag < 5:136626/149‑4 (MQ=255) ttGATCAACGTCACCCGCACGCCACCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGc < 7:1314691/149‑1 (MQ=255) tGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATccc > 2:315276/1‑274 (MQ=255) tCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑‑TTTTGCCATGCTGGC‑AAAAaccca < 5:1331260/144‑3 (MQ=255) aaCGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGaaaa > 5:486329/1‑149 (MQ=255) gTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAAcc > 6:923421/1‑149 (MQ=255) gTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGCCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCTGAAAAAcc > 6:1208479/1‑149 (MQ=255) ctcccGCAACCTGCCGAACGTATCGGATATAGCGCCACCAGCCGACCGCGCGAAGACACCGACAAATGGGCCAAAGAACGCCGGGCGCAGAATATTCACATCCGGCAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAAACGa < 6:948708/147‑1 (MQ=255) cACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGCCCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCAAGCATGGC‑AAAACCCGCAGAAAAACCgc < 6:689654/149‑2 (MQ=255) aCCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGAt > 7:167628/1‑149 (MQ=255) cGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGa > 6:214885/1‑145 (MQ=255) cGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGa < 5:214885/145‑1 (MQ=255) cgccgcCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGaa < 8:610515/149‑1 (MQ=255) gccgccGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAAc < 7:193140/149‑1 (MQ=255) gAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAgg < 5:1192196/149‑1 (MQ=255) aCTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACAAACCGAAGGTg < 7:962052/149‑1 (MQ=255) tgaTCGGAAAAAGCACCCCCAACCGGCCGCGGGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATCCCTGACCATGCGGCGATCGTGGCAATCGCCAg < 4:271148/273‑1 (MQ=255) gtATCGGTAATAGCACCACCAACCGAACGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGACGCAGAATATACACATCCGGGAACTTGG‑TTTTTGCCAGAATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAATGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAAGTGAGGCGCGTGAACTGGCGATATCATTCATCCCTGACCATGCGGCGATCGTGGCAATCGCCAg < 2:52546/274‑1 (MQ=255) tCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAg > 5:784256/1‑149 (MQ=255) cGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAgg > 5:63430/1‑149 (MQ=255) gAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTa > 7:371218/1‑149 (MQ=255) gAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTa > 8:1165860/1‑149 (MQ=255) gAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTa > 8:739490/1‑149 (MQ=255) gCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGAt < 5:360499/119‑1 (MQ=255) gCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAg > 8:809994/1‑149 (MQ=255) caccacCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAgg > 6:1123757/1‑149 (MQ=255) caccaACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTc > 8:772355/1‑149 (MQ=255) accaACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTca < 6:486329/149‑1 (MQ=255) accgaccgCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATCCCTGACCATGCGGCGATCGTGGCAATCGCCAGTAGCGGTACCCAAATCCATGc > 4:237798/1‑275 (MQ=255) cgaccgCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGcc < 8:1307425/149‑1 (MQ=255) accgCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCCGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATCCCTGACCATGAGGCGATCGt > 1:57109/1‑238 (MQ=255) accgCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCag < 6:763372/149‑1 (MQ=255) accgCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCag < 7:174268/149‑1 (MQ=255) accgCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGata < 2:16176/209‑1 (MQ=255) ccgCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCaga < 6:721663/149‑1 (MQ=255) gcgcgATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAgaga < 6:437057/149‑1 (MQ=255) gATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCa < 5:212087/149‑1 (MQ=255) cACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGt < 6:265173/149‑1 (MQ=255) aCCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGtt > 8:1073518/1‑149 (MQ=255) aCCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGtt > 5:202359/1‑149 (MQ=255) aCCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGtt < 7:670137/149‑1 (MQ=255) aCCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGtt > 6:1271434/1‑149 (MQ=255) ccGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTg > 6:656768/1‑149 (MQ=255) cGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCagag > 5:860495/1‑136 (MQ=255) gATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATaaa > 6:1157276/1‑93 (MQ=255) gATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTa > 6:810483/1‑149 (MQ=255) gATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTa > 8:339388/1‑149 (MQ=255) aTAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTaa < 7:739490/149‑1 (MQ=255) aTAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTaa < 6:1367679/149‑1 (MQ=255) aTAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGAATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTaa < 8:1181305/149‑1 (MQ=255) gggCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAgg < 8:159067/149‑1 (MQ=255) ccAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAg > 5:1363102/1‑149 (MQ=255) cAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGc < 7:284776/149‑1 (MQ=255) cAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGc > 7:145491/1‑149 (MQ=255) aaaGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCt > 7:1415113/1‑149 (MQ=255) aaGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAgg < 6:782507/143‑1 (MQ=255) aGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTgg > 5:1381766/1‑149 (MQ=255) aCGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAGCGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCg > 5:1066545/1‑149 (MQ=255) aCGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCg > 8:1142828/1‑149 (MQ=255) ggCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGAAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAAtt < 7:423540/149‑1 (MQ=255) cgcAGAATATTGACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAATCCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCaa > 5:1207054/1‑145 (MQ=255) cgcAAAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCaa < 6:1207054/145‑1 (MQ=255) gcAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAg > 8:1047127/1‑149 (MQ=255) aGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGgc < 8:367544/149‑1 (MQ=255) gAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTa < 2:65992/120‑1 (MQ=255) gAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGgcg > 6:66953/1‑149 (MQ=255) gAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGgc < 7:1141462/148‑1 (MQ=255) aaTATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGgcgc > 7:1055693/1‑149 (MQ=255) tatTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGt < 5:1456042/149‑1 (MQ=255) caTCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTg < 5:576238/149‑1 (MQ=255) cGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATCCCTGACCATTCGGCGATCGTGGCAATCGCCAGTAGCGGTACCCAAATCCATGCGGCATTCGCCAGCGACCTCACCGGAACGTCGGCCTGCGGTACGCCATTGACGccagggaagg > 2:304885/1‑267 (MQ=255) cTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATAtcat < 7:718067/149‑1 (MQ=255) tGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATAtcatt > 5:1146885/1‑149 (MQ=255) tGGG‑TTTTGGCCAGAATGGC‑AAAACCCGCAGAAAAACCGAGAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTAAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATCCCTGACCATGCGGCGATCGTGGCAATCGCCAGTAGCGGTACCCAAATCCATGCGGCATTCGCCAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATAc < 2:170842/275‑1 (MQ=255) gggttttGCCATGCTGGCAAAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAg < 7:151807/106‑1 (MQ=255) tttttGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATc < 8:145491/149‑1 (MQ=255) tttttGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATc < 7:1142828/149‑1 (MQ=255) ttttGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATcc < 8:785578/149‑1 (MQ=255) tttGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATccc < 5:517924/149‑1 (MQ=255) | GAACCACTTCCCAGACCCGCAGTCAGAAACAGCCCCATAAATACGGCGTAAAAGGCGATGAAATTACCGGAGCCTGTGCCCGGTAAGGTAAGGAACAGCAGGGCACTGAAAATCGCCATAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATCCCTGACCATGCGGCGATCGTGGCAATCGCCAGTAGCGGTACCCAAATCCATGCGGCATTCGCCAGCGACATCACCGAACCGTCGGCCTGCGGTACGCCATTGACGCCGAGAAAGGCAAATACAGGTA > NC_000913/1542967‑1543495 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |