BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	774,358	T→A	5.8%	L17Q (CTG→CAG)	ybgE →	putative inner membrane protein in cydABX‑ybgE operon

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	774,358	0	T	A	5.8%	785.8 / 26.3	220	L17Q (CTG→CAG)	ybgE	putative inner membrane protein in cydABX‑ybgE operon
Reads supporting (aligned to +/- strand): ref base T (92/115); new base A (7/6); total (99/121)
Fisher's exact test for biased strand distribution p-value = 5.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.55e-01

Only 100 of 223 total aligned reads displayed.

CCTGGTGTTACTGGAAAATGTTCGGTCGTATCACCAAAGAAGATATTGAACGTAACACCCACTCTCTGTACTAAGTAAGGAGCTAAAAATGTGGTATTTCGCATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGGTGTGATTCACGGCGTGGGCTTTCGTCCGCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAAATTATGGGC  >  NC_000913/774108‑774631

ccTGGTGTTACTGGAAAATGTTCGGTCGTATCACCAAAGAAGATATTGAACGTAACACCCACTCTCTGTACTAAGTAAGGAGCTAAAAATGTGGTATTTCGCATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGgc                                                                                                                                                                                                                                                           >  4:240848/1‑275 (MQ=255)

           tGGAAAATGTTCGGTCGTATCACCAAAGAAGATATTGAACGTAACACCCACTCTCTGTACTAAGTAAGGAGCTAAAAATGTGGTATTTCGCATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAg                                                                                                                                                                                                                                                <  4:18152/275‑1 (MQ=255)

              aaaaTGTTCGGTCGTATCACCAAAGAAGATATTGAACGTAACACCCACTCTCTGTACTAAGTAAGGAGCTAAAAATGTGGTATTTCGCATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑CACATCGTGATGGCGCt                                                                                                                                                                                                                                                        >  2:231877/1‑264 (MQ=255)

                                    aagaagATAGTGACCGTAACCCCCACTCTCTGTACTAAGTAAGGAGCTAAAAATGAGGCATTTCGCAGGGATTTTGGGAACGCTGCTTGCCTGTTCGTTTGGGGTAATCCCCGCGCTGGCGCTTGAACCCGTCGAATCAGGCAAAGCCGGTCAAGAAAACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCAtc                                                                                                                                                                                                                       <  4:270511/275‑1 (MQ=255)

                                                 aCGTAACACCCACTCTCTGTACTAAGTAAGGAGCTAAAAATGTGGTATTTCGCATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCcgcg                                                                                                                                                                                                          <  2:240848/275‑1 (MQ=255)

                                                    tAACACCCACTCTCTGTACTAAGTAAGGAGCTAAAAATGTGGTATTTCGCATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACGTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGGGATGGCGCTTCTGTTAGCCGGTTGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAg                                                                                                                                                                                                       >  1:12965/1‑275 (MQ=255)

                                                     aaCACCCACTCTCTGTACTAAGTAAGGAGCTAAAAATGTGGTATTTCGCATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCt                                                                                                                                                                                                                                                        <  2:69935/225‑1 (MQ=255)

                                                                              ggAGCTAAAAATGTGGTATTTCGCATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGGCGCGAAGACCAGTGCACTGGAAATCTGGCTTgg                                                                                                                                                                             >  1:74881/1‑275 (MQ=255)

                                                                                                      aTGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCt                                                                                                                                                                                                                                                                                    >  6:1118895/1‑149 (MQ=255)

                                                                                                           ttCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCggg                                                                                                                                                                                                                                                                               >  6:1006489/1‑149 (MQ=255)

                                                                                                              tGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGgcgc                                                                                                                                                                                                                                                                            <  7:249569/149‑1 (MQ=255)

                                                                                                              tGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGgcgc                                                                                                                                                                                                                                                                            <  7:3322/149‑1 (MQ=255)

                                                                                                               gggAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGTTTACCGCGACTTTGTATGCGGTAATGGACAAGGGCCCCCTGCGGGCGCt                                                                                                                                                                                                                                                                           >  5:465222/1‑149 (MQ=255)

                                                                                                                ggAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGCGTACGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTCTTGCTGATGTGGGCCGTCTGTGCTGgtgt                                                                                                                                            >  2:306795/1‑274 (MQ=255)

                                                                                                                ggAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCtt                                                                                                                                                                                                                                                                          >  7:302806/1‑149 (MQ=255)

                                                                                                                   aCGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑Tcc                                                                                                                                                                                                                                                                      >  8:1360764/1‑149 (MQ=255)

                                                                                                                   aCGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑Tcc                                                                                                                                                                                                                                                                      <  8:692016/149‑1 (MQ=255)

                                                                                                                     gCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCtt                                                                                                                                                                                                                                                                    >  8:535498/1‑149 (MQ=255)

                                                                                                                      cttcttGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTc                                                                                                                                                                                                                                                                   >  8:224336/1‑149 (MQ=255)

                                                                                                                      cttcttGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTc                                                                                                                                                                                                                                                                   <  6:515153/149‑1 (MQ=255)

                                                                                                                      cttcttGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTc                                                                                                                                                                                                                                                                   <  6:30454/149‑1 (MQ=255)

                                                                                                                       ttcttGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCg                                                                                                                                                                                                                                                                  >  8:825692/1‑149 (MQ=255)

                                                                                                                        tcttGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACCCGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGt                                                                                                                                                                                                                                                                 <  8:961264/149‑1 (MQ=255)

                                                                                                                        tcttGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGc                                                                                                                                                                                                                                               <  4:358396/167‑1 (MQ=255)

                                                                                                                          ttGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGt                                                                                                                                                                                                                                                   >  4:139924/1‑161 (MQ=255)

                                                                                                                              cTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGgc                                                                                                                                                                                                                                                           >  8:172181/1‑149 (MQ=255)

                                                                                                                              cTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGc                                                                                                                                                                                                                                               <  2:139924/161‑1 (MQ=255)

                                                                                                                                gTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGgcgc                                                                                                                                                                                                                                                         >  6:251376/1‑149 (MQ=255)

                                                                                                                                 ttCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATGAAGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTAGGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCGTTCGTGATGGCGCt                                                                                                                                                                                                                                                        >  8:898104/1‑149 (MQ=255)

                                                                                                                                            tAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAg                                                                                                                                                                                                                                             <  6:1251738/149‑1 (MQ=255)

                                                                                                                                            tAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATCAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAg                                                                                                                                                                                                                                             >  5:330650/1‑149 (MQ=255)

                                                                                                                                               tCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGat                                                                                                                                                                                                                                          <  5:13554/149‑1 (MQ=255)

                                                                                                                                               tCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGat                                                                                                                                                                                                                                          <  6:305443/149‑1 (MQ=255)

                                                                                                                                               tCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGat                                                                                                                                                                                                                                          <  8:150423/149‑1 (MQ=255)

                                                                                                                                               tCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGat                                                                                                                                                                                                                                          <  6:596445/149‑1 (MQ=255)

                                                                                                                                                        tGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGtttt                                                                                                                                                                                                                                 <  5:1238477/149‑1 (MQ=255)

                                                                                                                                                        tGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGtttt                                                                                                                                                                                                                                 <  8:302806/149‑1 (MQ=255)

                                                                                                                                                         ggCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGgc                                                                                                                                                                                                                                                           <  7:466172/122‑1 (MQ=255)

                                                                                                                                                         ggCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGgc                                                                                                                                                                                                                                                           >  8:466172/1‑122 (MQ=255)

                                                                                                                                                         ggCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTg                                                                                                                                                                                                                                <  5:291561/149‑1 (MQ=255)

                                                                                                                                                         ggCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTg                                                                                                                                                                                                                                <  7:1044550/149‑1 (MQ=255)

                                                                                                                                                         ggCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTg                                                                                                                                                                                                                                <  7:282907/149‑1 (MQ=255)

                                                                                                                                                            gcTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAACAGGATGTATGTTTTGGGa                                                                                                                                                                                                                             <  8:1238052/149‑1 (MQ=255)

                                                                                                                                                             cTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGAc                                                                                                                                                                                                                            <  7:521977/149‑1 (MQ=255)

                                                                                                                                                               tGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGAccc                                                                                                                                                                                                                          <  6:883293/149‑1 (MQ=255)

                                                                                                                                                                 aaCACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCAt                                                                                                                                                                                                                        <  5:1428823/149‑1 (MQ=255)

                                                                                                                                                                  acacGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCAtc                                                                                                                                                                                                                       >  7:1224474/1‑149 (MQ=255)

                                                                                                                                                                  acacGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCAtc                                                                                                                                                                                                                       >  5:1287822/1‑149 (MQ=255)

                                                                                                                                                                   cacGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCAtct                                                                                                                                                                                                                      >  6:1214254/1‑149 (MQ=255)

                                                                                                                                                                    acGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCt                                                                                                                                                                                                                                                                     <  6:947163/101‑1 (MQ=255)

                                                                                                                                                                    acGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCAtctc                                                                                                                                                                                                                     >  8:490657/1‑149 (MQ=255)

                                                                                                                                                                      gTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGt                                                                                                                                                                                                                   >  5:108227/1‑149 (MQ=255)

                                                                                                                                                                         gAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGtttt                                                                                                                                                                                                                <  8:1279094/149‑1 (MQ=255)

                                                                                                                                                                         gAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGtttt                                                                                                                                                                                                                <  5:1038535/149‑1 (MQ=255)

                                                                                                                                                                               ggCGAAGCCGGTCAAGAAGACATCTGAGGCGTAAGATTATCGCGACATTGCACGCGGTCATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCTTGATGGCGCTTCTGTTAGCAGGATGTCTGTTTTGGGACCTATCTCGGTTTGCcggg                                                                                                                                                                                                          >  8:562186/1‑147 (MQ=255)

                                                                                                                                                                               ggCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCcgcg                                                                                                                                                                                                          >  5:688834/1‑149 (MQ=255)

                                                                                                                                                                                 cAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGaa                                                                                                                                                                                                        <  5:261820/149‑1 (MQ=255)

                                                                                                                                                                                 cAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGaa                                                                                                                                                                                                        <  5:673415/149‑1 (MQ=255)

                                                                                                                                                                                  aaaGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAg                                                                                                                                                                                                       <  7:57937/149‑1 (MQ=255)

                                                                                                                                                                                  aaaGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAg                                                                                                                                                                                                       >  7:377472/1‑149 (MQ=255)

                                                                                                                                                                                    aGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGACATCTGGCATGGGTTATTGCTGATGTGGGCCGACGGGGTTGGTGTGATTCCCGGCGTGTGCTTTCGTCCGCGGCAGGTCTTTTGGCAAGGGTTTTTTTGCCCAtttcttgcact                                                                       >  4:17268/1‑272 (MQ=255)

                                                                                                                                                                                      ccGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGGTGTGATTCACGGCGTGGGCTTTCGTCCGCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGat                                                                      <  2:144592/274‑1 (MQ=255)

                                                                                                                                                                                       cGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAg                                                                                                                                                                                                  >  5:236102/1‑149 (MQ=255)

                                                                                                                                                                                        ggTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGt                                                                                                                                                                                                 <  8:1127771/149‑1 (MQ=255)

                                                                                                                                                                                          tCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGa                                                                                                                                                                                               <  6:108227/149‑1 (MQ=255)

                                                                                                                                                                                             agaagaCATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACt                                                                                                                                                                                            >  5:536131/1‑149 (MQ=255)

                                                                                                                                                                                             agaagaCATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACt                                                                                                                                                                                            <  5:1403838/149‑1 (MQ=255)

                                                                                                                                                                                               aagaCATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTgg                                                                                                                                                                                          >  7:15076/1‑149 (MQ=255)

                                                                                                                                                                                                 gaCATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGaa                                                                                                                                                                                        <  5:1006489/149‑1 (MQ=255)

                                                                                                                                                                                                      cTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTg                                                                                                                                                                                   <  7:1299766/149‑1 (MQ=255)

                                                                                                                                                                                                           gaGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATg                                                                                                                                                                              <  5:367615/149‑1 (MQ=255)

                                                                                                                                                                                                             gTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGt                                                                                                                                                                            <  6:536131/149‑1 (MQ=255)

                                                                                                                                                                                                             gTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGt                                                                                                                                                                            <  6:403152/149‑1 (MQ=255)

                                                                                                                                                                                                              tAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTg                                                                                                                                                                                                                                >  6:1405279/1‑96 (MQ=255)

                                                                                                                                                                                                              tAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGtt                                                                                                                                                                           >  5:447297/1‑149 (MQ=255)

                                                                                                                                                                                                              tAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGtt                                                                                                                                                                           >  6:1374394/1‑149 (MQ=255)

                                                                                                                                                                                                                   ttATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTg                                                                                                                                                                      <  7:222125/149‑1 (MQ=255)

                                                                                                                                                                                                                      tCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGGTGTGATTCACGGCGTGGGCTTTCGTCCGCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTTTCATTGTCGGGCTGATTttcttcttc                                     >  2:113727/1‑275 (MQ=255)

                                                                                                                                                                                                                       cgcgACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGa                                                                                                                                                                  <  5:488180/149‑1 (MQ=255)

                                                                                                                                                                                                                        gcgACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTgg                                                                                                                                                                                          <  7:968134/124‑1 (MQ=255)

                                                                                                                                                                                                                        gcgACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGAt                                                                                                                                                                 <  8:25384/149‑1 (MQ=255)

                                                                                                                                                                                                                            cTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTgg                                                                                                                                                             <  5:800775/149‑1 (MQ=255)

                                                                                                                                                                                                                                          aTGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCcgcg                                                                                                                                                                                                          <  4:101638/90‑1 (MQ=255)

                                                                                                                                                                                                                                            ggACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGgtg                                                                                                                                             >  5:216712/1‑149 (MQ=255)

                                                                                                                                                                                                                                             gACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGgtgt                                                                                                                                            <  6:586142/149‑1 (MQ=255)

                                                                                                                                                                                                                                              gaaaGCGCCCGCAGGGGGCGCTTGTCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGgtgt                                                                                                                                            >  6:1261777/3‑149 (MQ=255)

                                                                                                                                                                                                                                              gaaaGCGCCCGCAGGGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGt                                                                                                                                                                            >  8:1340901/3‑116 (MQ=255)

                                                                                                                                                                                                                                              gaaaGCGCCCGCAGGGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGt                                                                                                                                                                            <  7:1340901/114‑1 (MQ=255)

                                                                                                                                                                                                                                                aaGCGCCCGCAGGGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGAccc                                                                                                                                                                                                                          >  6:113321/1‑68 (MQ=38)

                                                                                                                                                                                                                                                aaGCGCCCGCAGGGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGAccc                                                                                                                                                                                                                          <  5:113321/68‑1 (MQ=38)

                                                                                                                                                                                                                                                aaGCGCCCGCAGGGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGAtgt                                                                                                                                                               <  6:1037321/127‑1 (MQ=255)

                                                                                                                                                                                                                                                aaGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTGTGTCAGCAGGATGTATGTTTTGGGACCCATCTCGTTGTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTAGTGCTGATGTTGGCCGTATGTGCGGGTGTGAt                                                                                                                                         >  7:901622/1‑149 (MQ=255)

                                                                                                                                                                                                                                                aaGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCtgt                                                                                                                                                    <  5:385587/138‑1 (MQ=255)

                                                                                                                                                                                                                                                  gcgcCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGGTGTGATTc                                                                                                                                       <  7:1358832/149‑1 (MQ=255)

                                                                                                                                                                                                                                                  gcgcCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTGTATTGCTGATGTGGGCCGTCTGTGCTGGTGTGATTc                                                                                                                                       >  6:352560/1‑149 (MQ=255)

                                                                                                                                                                                                                                                    gcCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGGTGTGATTCAc                                                                                                                                     <  7:820286/149‑1 (MQ=255)

                                                                                                                                                                                                                                                      ccccTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTg                                                                                                                                                                                                                                >  6:1179617/1‑56 (MQ=255)

                                                                                                                                                                                                                                                       cccTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGGTGTGATTCACGGc                                                                                                                                  >  6:791748/1‑149 (MQ=255)

                                                                                                                                                                                                                                                         ttGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGAACCCATTTCGTTTTGCCGCGAAGACCTGTGAAATGGAAATGTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGGTGTGATTCACGGCGTGGGCTTTCGTCCGCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAAATTATGGGc  <  2:201058/274‑1 (MQ=255)

                                                                                                                                                                                                                                                         gtGCGGGGGCTT‑TCCTTGGGGAGGGCGCTTGTGTTAGCAGGATGTATGTTTTGGGACCCATTTCGTTTGGCCGCGAAGACCAGTGAACTGGAAAGCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGGTGGGATTCACGGCGTGGGCTTTCGTCCGCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAAATTATGGGc  <  4:231825/274‑1 (MQ=255)

CCTGGTGTTACTGGAAAATGTTCGGTCGTATCACCAAAGAAGATATTGAACGTAACACCCACTCTCTGTACTAAGTAAGGAGCTAAAAATGTGGTATTTCGCATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTT‑TCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGGTGTGATTCACGGCGTGGGCTTTCGTCCGCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAAATTATGGGC  >  NC_000913/774108‑774631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`