BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2340313 =	NA (NA)	7 (0.050)	6/248	NT	NA	noncoding (1/82 nt)	REP163 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP163 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	2340346 =	NA (NA)	7 (0.050)	6/248	NT	NA	noncoding (34/82 nt)	REP163 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP163 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 150 total aligned reads displayed.

GTGGATCAGACCAGTTTAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCGTCTGGG  >  NC_000913/2340167‑2340457

agcgtggcgtggcagaaagggagtgatgattttgcccagacggcagggtttttgtcgatgacggtgaaatggtaatcactgtctagtcggcacggttgccggatgcggcgtaaacgccttatccggcctacggggagcatttgtagGcc                                                                                                                                                <  3:69757‑M1/3‑1 (MQ=255)

 gcgtggcgtggcagaaagggagtgatgattttgcccagacggcagggtttttgtcgatgacggtgaaatggtaatcactgtctagtcggcacggttgccggatgcggcgtaaacgccttatccggcctacggggagcatttgtagGCCt                                                                                                                                               <  1:1110899‑M1/4‑1 (MQ=255)

  ggATCAGACCAGTTTAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTg                                                                                                                                              >  4:539487/1‑149 (MQ=255)

    tggcgtggcagaaagggagtgatgattttgcccagacggcagggtttttgtcgatgacggtgaaatggtaatcactgtctagtcggcacggttgccggatgcggcgtaaacgccttatccggcctacggggagcatttgtagGCCTGAt                                                                                                                                            >  1:979887‑M1/143‑149 (MQ=255)

    tggcgtggcagaaagggagtgatgattttgcccagacggcagggtttttgtcgatgacggtgaaatggtaatcactgtctagtcggcacggttgccggatgcggcgtaaacgccttatccggcctacggggagcatttgtagGCCTGAt                                                                                                                                            >  3:1109096‑M1/143‑149 (MQ=255)

    aTCAGACCAGTTTAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGAt                                                                                                                                            <  1:894819/149‑1 (MQ=255)

    aTCAGACCAGTTTAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGAt                                                                                                                                            <  2:1230458/149‑1 (MQ=255)

    aTCAGACCAGTTTAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGAt                                                                                                                                            <  3:438002/149‑1 (MQ=255)

        gACCAGTTTAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGa                                                                                                                                        >  3:814312/1‑149 (MQ=255)

              tttAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTg                                                                                                                                  >  2:603984/1‑149 (MQ=255)

              tttAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTg                                                                                                                                  >  3:827355/1‑149 (MQ=255)

              tttAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTg                                                                                                                                  >  2:1229854/1‑149 (MQ=255)

              tttAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTg                                                                                                                                  >  2:1098214/1‑149 (MQ=255)

              tttAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTg                                                                                                                                  >  4:1094647/1‑149 (MQ=255)

                tAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGcc                                                                                                                                >  1:1166187/1‑149 (MQ=255)

                  aaaGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCcgc                                                                                                                              >  3:394041/1‑149 (MQ=255)

                    gagtgatgattttgcccagacggcagggtttttgtcgatgacggtgaaatggtaatcactgtctagtcggcacggttgccggatgcggcgtaaacgccttatccggcctacggggagcatttgtagGc                                                                                                                                                 <  1:367967‑M1/2‑1 (MQ=255)

                     gagCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTc                                                                                                                           >  2:444016/1‑149 (MQ=255)

                        cGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTa                                                                                                                        <  1:767402/149‑1 (MQ=255)

                         ggCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTAt                                                                                                                       <  2:89045/149‑1 (MQ=255)

                            attttgcccagacggcagggtttttgtcgatgacggtgaaatggtaatcactgtctagtcggcacggttgccggatgcggcgtaaacgccttatccggcctacggggagcatttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                                                                    >  3:1297021‑M1/119‑149 (MQ=255)

                            attttgcccagacggcagggtttttgtcgatgacggtgaaatggtaatcactgtctagtcggcacggttgccggatgcggcgtaaacgccttatccggcctacggggagcatttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                                                                    >  1:1051537‑M1/119‑149 (MQ=255)

                             tatCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg                                                                                                                   >  3:380362/1‑149 (MQ=255)

                               ttgcccagacggcagggtttttgtcgatgacggtgaaatggtaatcactgtctagtcggcacggttgccggatgcggcgtaaacgccttatccggcctacggggagcatttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                                 >  2:401213‑M1/116‑149 (MQ=255)

                               tCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                                 >  2:490130/1‑149 (MQ=255)

                                 aCTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                                                                                               >  1:1042624/1‑149 (MQ=255)

                                   tGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACa                                                                                                             >  4:114545/1‑149 (MQ=255)

                                     ggCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACaaa                                                                                                           <  2:318999/149‑1 (MQ=255)

                                      gacggcagggtttttgtcgatgacggtgaaatggtaatcactgtctagtcggcacggttgccggatgcggcgtaaacgccttatccggcctacggggagcatttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAt                                                                                                          >  3:11724‑M1/109‑149 (MQ=255)

                                        tGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGc                                                                                                        >  2:837295/1‑149 (MQ=255)

                                        tGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGc                                                                                                        >  1:854596/1‑149 (MQ=255)

                                        tGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGCCCTACAAATGc                                                                                                        <  1:1098214/149‑1 (MQ=255)

                                            ttACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGc                                                                                                                                          <  2:1108593/111‑1 (MQ=255)

                                            ttACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGc                                                                                                                                          >  1:1108593/1‑111 (MQ=255)

                                            ttACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTccc                                                                                                    >  3:1033485/1‑149 (MQ=255)

                                             tACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTcccc                                                                                                   <  2:111385/149‑1 (MQ=255)

                                                aaCCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTa                                                                                                >  3:1190072/1‑149 (MQ=255)

                                                 aCCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAg                                                                                               <  3:138593/149‑1 (MQ=255)

                                                 aCCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAg                                                                                               <  1:1097962/149‑1 (MQ=255)

                                                   ccGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGc                                                                                             >  4:159676/1‑149 (MQ=255)

                                                          cTAATACTTTTAAACTCGGCCCCGGCGTGGATGGGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGACGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATaa                                                                                      <  1:1119041/149‑1 (MQ=255)

                                                           tAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAg                                                                                     >  3:1402018/1‑149 (MQ=255)

                                                           tAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAg                                                                                     >  4:1360406/1‑149 (MQ=255)

                                                           tAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAg                                                                                     <  3:539487/149‑1 (MQ=255)

                                                           tAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAg                                                                                     >  4:813695/1‑149 (MQ=255)

                                                           tAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAg                                                                                     >  1:1414958/1‑149 (MQ=255)

                                                            aaTACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAgg                                                                                    >  4:1219545/1‑149 (MQ=255)

                                                            aaTACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAgg                                                                                    >  4:512840/1‑149 (MQ=255)

                                                              tACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCg                                                                                  >  3:522671/1‑149 (MQ=255)

                                                              tACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCg                                                                                  <  2:229173/149‑1 (MQ=255)

                                                              tACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGCTGATGTTTGGCCGCGCCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCg                                                                                  <  3:897865/149‑1 (MQ=255)

                                                                 ttttAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGc                                                                                                        <  4:1333136/124‑1 (MQ=255)

                                                                 ttttAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGc                                                                                                        >  3:1333136/1‑124 (MQ=255)

                                                                 ttttAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATGCGGCGtaa                                                                               >  4:1093225/1‑147 (MQ=255)

                                                                 ttttAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGttt                                                                               >  1:204283/1‑149 (MQ=255)

                                                                 ttttAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGttt                                                                               >  1:906849/1‑149 (MQ=255)

                                                                 ttttAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGttt                                                                               >  4:391197/1‑149 (MQ=255)

                                                                 ttttAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGttt                                                                               >  2:996321/1‑149 (MQ=255)

                                                                 tcttAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGttt                                                                               >  3:1430192/3‑149 (MQ=255)

                                                                  tttAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTa                                                                              <  3:1388884/149‑1 (MQ=255)

                                                                  tttAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTa                                                                              >  3:452407/1‑149 (MQ=255)

                                                                     aaaCTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTAcgc                                                                           >  2:436777/1‑149 (MQ=255)

                                                                        cTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTAcgccgc                                                                        >  1:887298/1‑149 (MQ=255)

                                                                        cTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTCGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTAcgccgc                                                                        >  4:227986/1‑149 (MQ=255)

                                                                         tCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCa                                                                       <  2:144670/149‑1 (MQ=255)

                                                                           tcactgtctagtcggcacggttgccggatgcggcgtaaacgccttatccggcctacggggagcatttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc                                                                                                                  <  1:1294839‑M1/33‑1 (MQ=255)

                                                                           ggCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATc                                                                     <  1:996321/149‑1 (MQ=255)

                                                                                   cGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGCTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAcc                                                             <  3:395523/149‑1 (MQ=255)

                                                                                     tGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGt                                                           <  4:1402018/149‑1 (MQ=255)

                                                                                     tGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGt                                                           >  1:1316432/1‑149 (MQ=255)

                                                                                         tgtgAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCg                                                       >  4:1400003/1‑149 (MQ=255)

                                                                                         tgtgAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCg                                                       <  2:722212/149‑1 (MQ=255)

                                                                                          gtgAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTcccc                                                                                                   <  1:360796/104‑1 (MQ=255)

                                                                                          gtgAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTcccc                                                                                                   >  2:360796/1‑104 (MQ=255)

                                                                                               cTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGa                                                 <  4:1033485/149‑1 (MQ=255)

                                                                                                 atatGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACa                                               <  4:708030/149‑1 (MQ=255)

                                                                                                      ctgcACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGAt                                          <  4:862520/149‑1 (MQ=255)

                                                                                                      ctgcACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGAt                                          >  4:692372/1‑149 (MQ=255)

                                                                                                       tgcACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGAtt                                         <  2:251588/149‑1 (MQ=255)

                                                                                                        gcACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCGTGCCGACTAGACAGTGATTa                                        <  4:24527/149‑1 (MQ=255)

                                                                                                        gcACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTa                                        >  1:519453/1‑149 (MQ=255)

                                                                                                         cacaCGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTAc                                       <  1:444016/149‑1 (MQ=255)

                                                                                                          acacGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTAcc                                      >  3:20275/1‑149 (MQ=255)

                                                                                                              gCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCAttt                                  >  3:346186/1‑149 (MQ=255)

                                                                                                                  aaTAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCAcc                              >  2:404578/1‑149 (MQ=255)

                                                                                                                       gTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCg                                                                                  <  4:918307/92‑1 (MQ=255)

                                                                                                                       gTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCg                                                                                  >  3:918307/1‑92 (MQ=255)

                                                                                                                             ttGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACaa                   >  2:948597/1‑149 (MQ=255)

                                                                                                                             ttGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACaa                   >  2:1199738/1‑149 (MQ=255)

                                                                                                                                 tGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAAc               <  1:766544/149‑1 (MQ=255)

                                                                                                                                 tGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAAc               >  1:436854/1‑149 (MQ=255)

                                                                                                                                  gTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAAcc              >  4:67265/1‑149 (MQ=255)

                                                                                                                                   tttGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAAccc             >  2:14728/1‑149 (MQ=255)

                                                                                                                                    ttGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCCCCGTCATCGACAAAAACCCt            <  4:380362/149‑1 (MQ=255)

                                                                                                                                       gCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGcc         >  4:104659/1‑149 (MQ=255)

                                                                                                                                       gCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGcc         >  3:168391/1‑149 (MQ=255)

                                                                                                                                       gCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGcc         >  1:591950/1‑149 (MQ=255)

                                                                                                                                        ccGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCg        >  4:192781/1‑149 (MQ=255)

                                                                                                                                           cgcCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCGTCt     <  3:1094647/149‑1 (MQ=255)

                                                                                                                                              cAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCGTCTggg  <  3:67265/149‑1 (MQ=255)

GTGGATCAGACCAGTTTAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCGTCTGGG  >  NC_000913/2340167‑2340457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.