New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4513364139 (0.860)6 (0.040) 5/248 NT 4.3% coding (46/999 nt) fecC ferric citrate ABC transporter permease
?NC_000913 = 4513381 138 (0.900)coding (29/999 nt) fecC ferric citrate ABC transporter permease
Rejected: Frequency below/above cutoff threshold.

Only 100 of 163 total aligned reads displayed.

AGGCTTCGTGGCAAACGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCCGCGCCCAGGTGTTACTGTCGA  >  NC_000913/4513216‑4513512
                                                                                                                                                     |                                                                                                                                                    
aGGCTTCGTGGCAAACGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGT‑CAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCa                                                                                                                                                     >  3:775513/1‑149 (MQ=255)
  gCTTCGTGGCAAACGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCaa                                                                                                                                                    >  1:914513/1‑149 (MQ=255)
   cTTCGTGGCAAACGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAAc                                                                                                                                                   <  4:1329737/149‑1 (MQ=255)
    ttCGTGGCAAACGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACg                                                                                                                                                  >  4:1030521/1‑149 (MQ=255)
    ttCGTGGCAAACGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACg                                                                                                                                                  >  2:1380135/1‑149 (MQ=255)
      cGTGGCAAACGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACggg                                                                                                                                                <  1:972599/149‑1 (MQ=255)
        tGGCAAACGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGaa                                                                                                                                              <  3:563206/149‑1 (MQ=255)
           cAAACGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCAGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCGGCAACGGGAAGcc                                                                                                                                           <  4:1445494/149‑1 (MQ=255)
            aaaCGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGccc                                                                                                                                          >  4:543144/1‑149 (MQ=255)
            aaaCGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGccc                                                                                                                                          <  4:460821/149‑1 (MQ=255)
            aaaCGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGccc                                                                                                                                          >  3:1066369/1‑149 (MQ=255)
              aCGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGccccc                                                                                                                                        >  4:340803/1‑149 (MQ=255)
               cGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCca                                                                                                                                       >  1:1076795/1‑149 (MQ=255)
               cGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCca                                                                                                                                       >  1:244212/1‑149 (MQ=255)
                gAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCcac                                                                                                                                      >  4:681786/1‑149 (MQ=255)
                gAAGGATTGGCACCAGAGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCcac                                                                                                                                      >  2:58536/1‑149 (MQ=255)
                          cACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCg                                                                                                                            >  1:1001178/1‑149 (MQ=255)
                           aCCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCtgtgggggcttcccgttgcagca                                                                                                                               >  4:780642‑M1/1‑122 (MQ=255)
                           aCCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCgg                                                                                                                           <  1:1133605/149‑1 (MQ=255)
                            ccAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCggg                                                                                                                          >  3:22832/1‑149 (MQ=255)
                              aGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGgtg                                                                                                                        >  2:326190/1‑149 (MQ=255)
                              aGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGgtg                                                                                                                        >  3:522942/1‑149 (MQ=255)
                                 gcTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGttt                                                                                                                     >  3:830095/1‑149 (MQ=255)
                                  cTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGtttt                                                                                                                    <  1:793250/149‑1 (MQ=255)
                                     cTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATc                                                                                                                 <  3:1283331/149‑1 (MQ=255)
                                      tGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATcg                                                                                                                <  4:170697/149‑1 (MQ=255)
                                         tAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCgg                                                                                                             >  4:585685/1‑149 (MQ=255)
                                              ttGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCAtt                                                                                                        >  1:365578/1‑149 (MQ=255)
                                                 gCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAGACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTca                                                                                                     >  3:397880/1‑149 (MQ=255)
                                                 gCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTca                                                                                                     >  1:152147/1‑149 (MQ=255)
                                                   gtgtgtCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTcaca                                                                                                   >  3:1120036/1‑149 (MQ=255)
                                                      tgtCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACg                                                                                                <  4:513763/149‑1 (MQ=255)
                                                        tCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGt                                                                                              >  1:1132262/1‑149 (MQ=255)
                                                          cAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTaa                                                                                            >  3:918521/1‑149 (MQ=255)
                                                           aGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCtgtgggggcttcccgttgcagcacttat                                                                                                                          <  2:1176035‑M1/118‑29 (MQ=255)
                                                           aGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCtgtgggggcttcccgttgcagcacttat                                                                                                                          >  1:1176035‑M1/1‑90 (MQ=255)
                                                           aGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAg                                                                                           >  2:854132/1‑149 (MQ=255)
                                                           aGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAg                                                                                           >  1:149141/1‑149 (MQ=255)
                                                           aGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAg                                                                                           >  1:535234/1‑149 (MQ=255)
                                                            ggCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGc                                                                                          <  2:202175/149‑1 (MQ=255)
                                                               agcagGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCtgtgggggcttcccgttgcagca                                                                                                                               >  2:1265365‑M1/1‑86 (MQ=255)
                                                               agcagGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCtgtgggggcttcccgttgcagca                                                                                                                               <  1:1265365‑M1/109‑24 (MQ=255)
                                                               agcagGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACaa                                                                                                  <  2:2891/138‑1 (MQ=255)
                                                                  agGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGa                                                                                    >  1:62334/1‑149 (MQ=255)
                                                                     gcgcGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGAtgg                                                                                 >  3:11062/1‑149 (MQ=255)
                                                                      cgcgGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGAtggt                                                                                <  4:1175410/149‑1 (MQ=255)
                                                                       gcgGGTTGCATCTGCTCCGGAAACAGGAATGGCCAAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGAtggtg                                                                               <  1:1236750/149‑1 (MQ=255)
                                                                              gCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGAtt                                                                        <  2:449257/149‑1 (MQ=255)
                                                                              gCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGAtt                                                                        >  4:334933/1‑149 (MQ=255)
                                                                              gCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGAtt                                                                        <  4:1130760/149‑1 (MQ=255)
                                                                               cATCTGCTCCGGAAACAGGAATGGTCGAGTAGCAAAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGAtt                                                                        <  2:1443890/149‑1 (MQ=255)
                                                                               cATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGAttt                                                                       >  1:1297032/1‑149 (MQ=255)
                                                                                  cTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTa                                                                    <  2:62334/149‑1 (MQ=255)
                                                                                   tGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTAc                                                                   <  4:409554/149‑1 (MQ=255)
                                                                                      tCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGt                                                                                                            <  3:1316156/105‑1 (MQ=255)
                                                                                      tCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGt                                                                                                            >  4:1316156/1‑105 (MQ=255)
                                                                                      tCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCgt                                                                <  2:1132262/149‑1 (MQ=255)
                                                                                         ggAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTcaca                                                                                                   <  4:927606/111‑1 (MQ=255)
                                                                                          gAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCa                                                            >  1:603238/1‑149 (MQ=255)
                                                                                            aaCAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGc                                                          <  3:681653/149‑1 (MQ=255)
                                                                                            aaCAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGc                                                          >  1:1257625/1‑149 (MQ=255)
                                                                                                 gAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCaa                                                     <  4:1148378/149‑1 (MQ=255)
                                                                                                       ccGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGct                                               >  4:74931/1‑149 (MQ=255)
                                                                                                         gAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGctct                                             >  3:886834/1‑149 (MQ=255)
                                                                                                              gC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTgcagc                                        >  3:721383/1‑149 (MQ=255)
                                                                                                              ac‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTg                                            >  3:617045/2‑145 (MQ=255)
                                                                                                               c‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTgcagca                                       <  4:775513/149‑1 (MQ=255)
                                                                                                                  aaaCAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGc                                                       <  2:1164974/131‑1 (MQ=255)
                                                                                                                  aaaCAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCaaa                                     >  1:415343/1‑149 (MQ=255)
                                                                                                                  aaaCAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCATGTCAGCGGCAATACGCTCTGCAGCaaa                                     <  4:11062/149‑1 (MQ=255)
                                                                                                                   aaCAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGc                                                                                       <  3:928467/98‑1 (MQ=255)
                                                                                                                   aaCAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCaaaa                                    >  4:933790/1‑149 (MQ=255)
                                                                                                                   aaCAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCaaaa                                    >  4:194149/1‑149 (MQ=255)
                                                                                                                   aaCAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACACTCTGCAGCaaaa                                    >  1:54577/1‑149 (MQ=255)
                                                                                                                    aCAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGGAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCaaaaa                                   >  4:843134/1‑149 (MQ=255)
                                                                                                                    aCAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCaaaaa                                   <  3:907442/149‑1 (MQ=255)
                                                                                                                    aCAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCaaaaa                                   <  2:244212/149‑1 (MQ=255)
                                                                                                                      aGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATa                                 >  3:15068/1‑149 (MQ=255)
                                                                                                                      aGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATa                                 <  2:509879/149‑1 (MQ=255)
                                                                                                                       gACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATAc                                >  3:251929/1‑149 (MQ=255)
                                                                                                                          tCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACcgc                             >  2:613733/1‑149 (MQ=255)
                                                                                                                          tCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACcgc                             <  2:856559/149‑1 (MQ=255)
                                                                                                                                aGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATcc                       >  1:245563/1‑149 (MQ=255)
                                                                                                                                 gAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCcg                      >  2:44448/1‑149 (MQ=255)
                                                                                                                                  aaaaTAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCcgc                     <  2:588410/149‑1 (MQ=255)
                                                                                                                                  aaaaTAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCcgc                     <  1:613733/149‑1 (MQ=255)
                                                                                                                                        ataataaGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCCGCGCCCAg               <  4:442882/149‑1 (MQ=255)
                                                                                                                                        ataataaGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCCGCGCCCAg               <  1:326190/149‑1 (MQ=255)
                                                                                                                                         taataaGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCCGCGCCCAgg              >  2:296364/1‑149 (MQ=255)
                                                                                                                                           ataaGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCCGCGCCCAGgtg            <  4:895761/149‑1 (MQ=255)
                                                                                                                                           ataaGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCCGCGCCCAGgtg            >  1:1267271/1‑149 (MQ=255)
                                                                                                                                              aGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCCGCGCCCAGGTGTTa         >  2:80842/1‑149 (MQ=255)
                                                                                                                                              aGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCCGCGCCCAGGTGTTa         <  3:1163899/149‑1 (MQ=255)
                                                                                                                                              aGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCACCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCCGCGCCCAGGTGTTa         >  2:348258/1‑149 (MQ=255)
                                                                                                                                                tgctgcAACGGGAAGCCCCCACAgcagcacttattattattttctggctgagtctgttttgctactcggccattcctgtttccggagcagatgcaacccgcgccctgctgcctggacacacgccaacgctaccagaagcgctggt           <  3:780642‑M2/145‑123 (MQ=255)
                                                                                                                                                tgctgcAACGGGAAGCCCCCACAgcagcacttattattattttctggctgagtctgttttgctactcggccattcctgtttccggagcagatgcaacccgcgccctgctgcctggacacacgccaacgctaccagaagcgctggt           >  4:780642‑M2/1‑23 (MQ=255)
                                                                                                                                                tgctgcAACGGGAAGCCCCCACAgcagcacttattattattttctggctgagtctgttttgctactcggccattcctgtttccggagcagatgcaacccgcgccctgct                                               >  2:1265365‑M2/1‑23 (MQ=255)
                                                                                                                                                tgctgcAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCCGCGCCCAGGTGTTACt       <  3:372736/149‑1 (MQ=255)
                                                                                                                                                     ctgtgggggcttcccgttgcagcacttattattattttctggctgagtctgttttgctactcggccattcctgtttccggagcagatgcaacccgcgccctgctgcctggacacacgccaacgctaccagaagcgctggtgcaaaacct  <  1:2125‑M1/149‑149 (MQ=255)
                                                                                                                                                     cAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCCGCGCCCAGGTGTTACTGTCGa  <  2:405775/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
AGGCTTCGTGGCAAACGAAGGTTTTGCACCAGCGCTTCTGGTAGCGTTGGCGTGTGTCCAGGCAGCAGGGCGCGGGTTGCATCTGCTCCGGAAACAGGAATGGCCGAGTAGC‑AAAACAGACTCAGCCAGAAAATAATAATAAGTGCTGCAACGGGAAGCCCCCACAGCAGCACCGGGTGTTTTATCGCGGTCATTTCACAACGGTAAGCGGCTGATGGTGGAAGATTTTTACCGTGTCAGCGGCAATACGCTCTGCAGCAAAAATACCGCGCATCCGCGCCCAGGTGTTACTGTCGA  >  NC_000913/4513216‑4513512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.