| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 647,575 | A→C | 5.2% | V154G (GTC→GGC) | citX ← | apo‑citrate lyase phosphoribosyl‑dephospho‑CoA transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 647,575 | 0 | A | C | 5.2% | 594.5 / 18.0 | 168 | V154G (GTC→GGC) | citX | apo‑citrate lyase phosphoribosyl‑dephospho‑CoA transferase |
| Reads supporting (aligned to +/- strand): ref base A (77/82); new base C (5/4); total (82/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 | |||||||||||
Only 100 of 170 total aligned reads displayed.
CGCGCCAGCCCAGCAGGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTT > NC_000913/647428‑647723 | tgagtacgccctgcTGGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGAc > 1:1207003/8‑149 (MQ=255) tagcccagcAGGGCGTACTAATCGATTAATGACGTCGCAAGCTTTGTGGCTTTAGTTGACGTTGAAGGCATCGACAACGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGTTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTg < 2:1058656/148‑1 (MQ=255) agcccagcAGGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTgc > 2:751172/1‑149 (MQ=255) gcccagcAGGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTgcg > 3:1449988/1‑149 (MQ=255) cccagcAGGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTgcgc > 3:898117/1‑149 (MQ=255) cagcagGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGG‑TTTTCCACGCGCGCAGACGGCTGCGCttt < 1:1237121/149‑1 (MQ=255) agcagGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCttt < 1:1310306/149‑1 (MQ=255) agGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGCCGTCTgcgcgcgtgg < 4:670111/149‑7 (MQ=255) gggCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTc < 2:1259401/149‑1 (MQ=255) ggCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCg > 2:1027394/1‑149 (MQ=255) cGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGca < 1:240378/149‑1 (MQ=255) tACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCttt < 2:1105820/140‑1 (MQ=255) aCTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCacaa < 2:1286824/149‑1 (MQ=255) aCTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCacaa < 2:463900/149‑1 (MQ=255) tCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGc > 2:1134209/1‑149 (MQ=255) aTTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAgc < 3:436856/149‑1 (MQ=255) ttAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCGCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAgcg < 2:1037528/149‑1 (MQ=255) aaTGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAgcggc > 3:122377/1‑149 (MQ=255) aTGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAgcggcg > 4:1145938/1‑149 (MQ=255) tGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGtt < 1:1308125/129‑1 (MQ=255) gACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAg < 1:500848/149‑1 (MQ=255) gACGTCGCAAGCTTTGTGGTTTTAGTGGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAg > 2:379153/1‑149 (MQ=255) aCGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGa > 4:1385209/1‑147 (MQ=255) aaGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGt < 4:746092/149‑1 (MQ=255) aaGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGt < 2:1067676/149‑1 (MQ=255) gtgGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGt > 3:1121960/1‑149 (MQ=255) tgGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTc < 2:780303/149‑1 (MQ=255) tgGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTc > 3:614928/1‑149 (MQ=255) gTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTcgc < 2:862121/149‑1 (MQ=255) gTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTcgc > 3:1136962/1‑149 (MQ=255) ttttAGTTGACTTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTcgcg > 1:1098536/1‑149 (MQ=255) ttttAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTcgcg > 3:1314406/1‑149 (MQ=255) tttAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCgcgg < 2:654320/149‑1 (MQ=255) aGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGt > 1:1189001/1‑134 (MQ=255) aGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGcggcgg < 4:122377/149‑1 (MQ=255) ttGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGga > 1:1128544/1‑149 (MQ=255) ttGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGga > 3:745677/1‑149 (MQ=255) tGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCTGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGgag < 1:756041/149‑1 (MQ=255) tGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGgag < 4:206319/149‑1 (MQ=255) gCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAAttt < 2:1320852/149‑1 (MQ=255) cAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGGGAGAATTTc < 4:42876/149‑1 (MQ=255) cAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTc < 4:163961/149‑1 (MQ=255) aGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTca > 4:1168566/1‑148 (MQ=255) aGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCg > 2:307563/1‑149 (MQ=255) aTCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCtt < 3:191593/149‑1 (MQ=255) aTCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCtt > 1:394217/1‑149 (MQ=255) tCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTc < 1:733992/149‑1 (MQ=255) cGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCg < 3:1114477/149‑1 (MQ=255) gACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCgg < 4:189205/149‑1 (MQ=255) aCATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTGCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGATAGAATTTCGCCTTCggg > 2:900421/1‑149 (MQ=255) cATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGc < 2:556604/149‑1 (MQ=255) aTCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCg > 4:626402/1‑149 (MQ=255) tCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGt > 3:506265/1‑149 (MQ=255) cGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTc < 2:1434167/149‑1 (MQ=255) ttCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAg > 4:1454270/1‑149 (MQ=255) gcagTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACa < 2:1207003/149‑1 (MQ=255) cagTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACAt < 3:658351/149‑1 (MQ=255) cagTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACAt < 2:1210837/149‑1 (MQ=255) cagTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACAt > 2:674729/1‑149 (MQ=255) cagTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACAGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGCCCGCAGCGAATAGTCGCGGCGGGAGCGAATTTCGCCTTCGGGCGTCAGGACAt > 2:200844/1‑149 (MQ=255) gTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCg < 1:611932/149‑1 (MQ=255) ccTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGGCAGGACATCGata > 2:976357/1‑149 (MQ=255) cTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGatat > 4:936217/1‑149 (MQ=255) cTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGatat < 2:1098536/149‑1 (MQ=255) cTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGatat > 2:680211/1‑149 (MQ=255) cTCCATGCGGTTGAGCAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGACAGGACATAGatat > 2:1289137/1‑149 (MQ=255) tCCATGCGGTTGAGTAAATGGGTCAGTTGATTGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCCGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATc < 4:658517/149‑1 (MQ=255) tCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATc > 3:941425/1‑149 (MQ=255) ccATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATcc < 1:575812/149‑1 (MQ=255) ccATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATcc < 2:1242767/149‑1 (MQ=255) aTGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGtt > 1:902779/1‑64 (MQ=255) tGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCAt > 3:321597/1‑149 (MQ=255) cGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATaa < 4:745677/149‑1 (MQ=255) ggTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAAc > 1:34306/1‑149 (MQ=255) aGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGccc < 3:189999/149‑1 (MQ=255) gTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCg > 2:1461115/1‑149 (MQ=255) tAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCga < 3:1007098/149‑1 (MQ=255) tAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCga < 4:898117/149‑1 (MQ=255) aaTCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGCATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCgaga < 4:103044/149‑1 (MQ=255) aaTCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGAGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCgaga > 1:515559/1‑149 (MQ=255) aTCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGagag > 3:579157/1‑149 (MQ=255) ggTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGAt < 1:307563/149‑1 (MQ=255) gTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATg > 2:595268/1‑149 (MQ=255) gTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTa > 4:553034/1‑149 (MQ=255) ttGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGGGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTAt > 1:152603/1‑149 (MQ=255) ttGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTAt < 3:318552/149‑1 (MQ=255) gATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGAGAGGAGGCAGTGAATAGTCGCGGCGGGAGAGCATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGt > 2:82958/1‑149 (MQ=255) ggTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCaa < 1:889476/149‑1 (MQ=255) agTTTTGCCACGCGAGCAGACGGCTGCGCTTTGTTCGCGCAACAGGCAGCGGCGAGTCGGCAGTGGATAGTCGAGGCGGCACAGAATTTCTCCTTCGGGCGTCAGGACATCGATGTCCAATACCCGCCCGAGAGGATGACTATATTaaa < 4:239891/148‑1 (MQ=255) gTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAg > 1:540702/1‑149 (MQ=255) gTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAg > 2:1156244/1‑149 (MQ=255) gTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAg > 3:1318446/1‑149 (MQ=255) tttCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTc > 4:303935/1‑149 (MQ=255) ccACGCGCGCTGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTTACTAGTCGCGGCGTGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAAt < 1:1062131/149‑1 (MQ=255) cgcgcgCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAAtggt < 4:614928/149‑1 (MQ=255) aaagcgcAGCCGTCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAAtggt > 4:1260878/4‑149 (MQ=255) aagcgcAGCCGTCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGt < 4:1197017/132‑1 (MQ=255) gcgcAGCCGTCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCaa < 3:1150724/136‑1 (MQ=255) gcAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGa < 3:312823/149‑1 (MQ=255) aCGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCtt < 4:321597/149‑1 (MQ=255) | CGCGCCAGCCCAGCAGGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTT > NC_000913/647428‑647723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |