New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1049778 =	NA (NA)	10 (0.080)	4/484	9.8	20.4%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	1470336 =	39 (0.330)					noncoding (1041/1221 nt)	IS30	repeat region
Rejected: Coverage evenness skew score above cutoff.

ATCACGTTATACGATCATCCTTAGACTCAGGGGCAAAGATTCTGTCTCAGTAAATCAGGCTCTTACCGACAAATTCCTGAGTTTACCGTCAGAACTCAGAAAATCACTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAA  >  NC_000913/1470119‑1470604                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                              aacacataataCGATCATACTTAAACTGAGAGGAAAAGATACATTCTCAATAAATCAAGCCCTTACCGACAAATTCCTGAGTTAACCGTCAGAACGCAGAAAATCACTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAata                                                                                                                                                                                                                     <  4:495833/268‑1 (MQ=1)           acgtacatcagtAGACTCAGGCTCAAAGATTCTGTCTCAGTAAATCAGGGTACTGCCGACAGATTCCTTAGTTTACCGTCAGAACTCAGAAAATCACTGACATGGGACAAAGGAATGGAACTGGTCATAAATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCTAGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACa                                                                                                                                                                                                            <  3:157830/264‑1 (MQ=1)                                                                                              acgcaaaaaaTCACTGACAAGGGAGAGAGGAATGGAACTGACCAGACATCTAGAATTTACGGTCAGCACCGGCGTTAAAGTTTACTACTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGaa                                                                                                                          <  1:458700/268‑1 (MQ=0)                                                                                                  agaacataccTGACAGGGTGCACAGGACTGGACCTTGCCTGACATCTAGAATTTACTGTCAGACCCGGCGTTAAAGTTTACTTCTGGGATCCTCAGAGTGCTTGGCAGCGGAGAACAAATGAGAACACAAATGGTCTAATTCGGCAGTACTTTCCTAAAAAGACATCGCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGgt                                                                                                                    <  4:580382/267‑1 (MQ=1)                                                                                                                 tgtgaaagagGAAATGAACTAGTCAGATATATAGAAATTACTGTCTGGACCGGCGTAAAAATTGACGTTAGCGATCCTCAGAGTCCTGTGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGAt                                                                                                     <  4:14068/270‑1 (MQ=1)                                                                                                                  ggaaCAGAGGAATTGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGAGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACGTTCCTAAAAAGACATGTCTTGCCCAATATACTAAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGAt                                                                                                     <  1:228195/272‑1 (MQ=0)                                                                                                                            aaTGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTacac                                                                                          <  2:212786/276‑1 (MQ=11)                                                                                                                              tGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACt                                                                                         >  1:510130/1‑275 (MQ=11)                                                                                                                                       ccAGACATCTAGAATTTACTGTCAGTACCGACGTTAAAGTTTACTGCTGCGATCCTCAGAGTCCTTGGCAACGGGGAACAAATGAGAACACAAATGGGCTAAGTCTGCAGTACTTTCCTAAAAAGACATGTCCTCCCCAATATGCTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTc                                                                              <  4:306356/276‑1 (MQ=255)                                                                                                                                        cataCATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTg                                                                                                                                                        <  4:667072/199‑1 (MQ=1)                                                                                                                                           aCATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGaa                                                                          >  2:169002/1‑276 (MQ=35)                                                                                                                                           aCATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGa                                                                           >  3:107811/1‑275 (MQ=35)                                                                                                                                                tAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAg                                                                     >  4:359876/1‑276 (MQ=38)                                                                                                                                                tAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCGAAACAACAGACCGAGAAAGACACAGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGAGGTTGAATTGACAGATTGAAACTACACAGTTGAAA‑TTACGAAtttga                                                                     >  4:566299/1‑274 (MQ=11)                                                                                                                                                      ttACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGttt                                                                 <  1:133775/274‑1 (MQ=40)                                                                                                                                                        aCTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGAGACTGAAGTTCAAAACACCGACAGAGATAATTTAAAGGGGTTTTGCATTGCAAGATCGAACCCAAACTTTTGAAATTTCAG‑ATTTAGGTTTTGc                                                              >  3:7901/1‑275 (MQ=11)                                                                                                                                                             cAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGt                                                        >  2:475053/1‑276 (MQ=255)                                                                                                                                                              aGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGt                                                        >  3:200100/1‑275 (MQ=255)                                                                                                                                                                 aCCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTa                                                      <  2:359876/274‑1 (MQ=255)                                                                                                                                                                      cGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTCCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGa                                               >  2:585269/1‑276 (MQ=255)                                                                                                                                                                       gTTAAAGTTTACTTCTGCGATCCTCAGATTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGa                                               <  1:318327/275‑1 (MQ=255)                                                                                                                                                                             atttccctCTGCGATCCTCAGAGTCCTTTGCAACGGGGAACAAATTAGAACACAAATGGCCTAATTCGGCAGTACTTTCCTAAAAAGAAATGTCATGCCCAATATACTCAACATGAACTAGATCTGGTTTCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATac                                         <  3:96850/268‑1 (MQ=17)                                                                                                                                                                              tttcatgcTGCGATCCTCAGAGTCCTTGTCAGCAGGGAACAAATTAGAACACAAATGGGCCTATTCGGCAGTACTTTGCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCCCAGCTAAACAACAGGCCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa                                       <  2:554990/269‑1 (MQ=17)                                                                                                                                                                              tttACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa                                       <  4:169002/276‑1 (MQ=255)                                                                                                                                                                              tttACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa                                       <  2:263838/276‑1 (MQ=255)                                                                                                                                                                              tttACTTCTGCGATCCTCAGAGTCCTTCGCAGCGGGGAACAAATTATAACACAAATGGGCTAATTAGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAGCTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTAAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa                                       <  2:665950/276‑1 (MQ=255)                                                                                                                                                                              tgtACTTCTTCGATCCTCAGAGTCCCTGGCAGCGGGGAACAAAGGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa                                       <  2:459393/274‑1 (MQ=255)                                                                                                                                                                               ttACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa                                       <  1:107811/275‑1 (MQ=255)                                                                                                                                                                               ttACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCACAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa                                       <  3:452166/275‑1 (MQ=255)                                                                                                                                                                               ttACTTCTGCGATCCTCAGAGTCCTTGGCAGAGGGGAACAAATAAGAAAACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa                                       <  3:409059/275‑1 (MQ=255)                                                                                                                                                                               ttACTTCCACGCTGCTCAGAGTCCTTGGCAACGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa                                       <  3:471819/275‑1 (MQ=255)                                                                                                                                                                                tACTTCGGCGAACCACAGAGGCCATGGCACCCGGAAAAAAATGAGAACACAAAGGGACTAATTATGCAGTACTTTCCTAAAAGGACATGTCTTGCCCAATATACTCAACATGAACGAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATNATTGAAAGGTGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaaca                                     <  4:392958/276‑1 (MQ=17)                                                                                                                                                                                 aCTTCTGGGATGCTTAGAGCCCTTGGGAGCTGTGAACAAATGAGAAAACAAAGGGGCTAATACGGTAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTGGCTTCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa                                       <  2:37881/273‑1 (MQ=17)                                                                                                                                                                                     cTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGt                                  <  1:82078/274‑1 (MQ=255)                                                                                                                                                                                               aggaatCCTGGGCAGCAGCGAACAAATGAGAAAACAAAGTGGCTAATTCGGCAGTACTTTCCGAAAAAGACCTGTCTTTCCCAATCTACTCAACAAGAACTAGGTCTGGTTGCGGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGc                      <  4:585269/271‑1 (MQ=18)                                                                                                                                                                                                       tttgCAGCGGCGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAATACATTTCTTGCCCAATATACTCAACATGAACTACATCTGGTtgct                                                                                                                                                                                         >  3:117252/4‑106 (MQ=1)                                                                                                                                                                                                       ttGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGAtct               >  3:466640/1‑275 (MQ=255)                                                                                                                                                                                                                   aaCAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACaaaa  <  2:44416/276‑1 (MQ=255)                                                                                                                                                                                                                   aaCAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACaaa   <  1:200100/275‑1 (MQ=255)                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                              ATCACGTTATACGATCATCCTTAGACTCAGGGGCAAAGATTCTGTCTCAGTAAATCAGGCTCTTACCGACAAATTCCTGAGTTTACCGTCAGAACTCAGAAAATCACTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAA‑TTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAA  >  NC_000913/1470119‑1470604

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.