New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1049778 =NA (NA)10 (0.080) 4/484 9.8 21.3% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 4507639 37 (0.310)noncoding (1041/1221 nt) IS30 repeat region
Rejected: Coverage evenness skew score above cutoff.

TCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCATTCCTCTGTCCCATGTCAGTGATTTTCTGAGTTCTGACGGTAAACTCAGGAATTTGTCGGTAAGAGCCTGATTTACTGAGACAGAATCTTTGCCCCTGAGTCTAAGGATGATCGTATAACGTGATTTTCGGTCTACAAGT  >  NC_000913/4507368‑4507871
                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                        
tctcCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTAAATTATCCCTTTCGGTGTTTTGAACTCCAGTGTCTTTCTCGGTCTGTTGTTTTGCTGAGCAGCAACCAGTTCTAGTTCTTGTTGAGTATATTGGGCATGACATCCCTTTTTAGTAAAGTACTGCCGAATTTGCCCATTCGCGGTCTCttt                                                                                                                                                                                                                                       >  2:521026/1‑275 (MQ=21)
        aaCACCAAAACAAATCAAGATACTTAGGCAGAGTAAAAAGCTAAAACTAATTTAAATACAGAATTAAATAATAAAAAGGCTACTGTATATTCAATCTGTCAATGCAACACCTCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTTAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCg                                                                                                                                                                                                                              <  4:157722/276‑1 (MQ=14)
         acacCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCg                                                                                                                                                                                                                              <  1:543434/275‑1 (MQ=255)
                    aaTCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAGAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGAct                                                                                                                                                                                                                  >  2:587931/1‑276 (MQ=255)
                     aTCGAAATACGTAAGCTGAGGAAAACGCTACAACGGCTTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTCTCTCTTTCGGTGTTTTTACCTTCCGTGTCTTTCTCGTTCTGTTGCTTAGCTTAGCTGCAACCTGATCTAGTTCATGTTGAGTCTATTGGTCAAGACATTCCTTTTTAGGACAGTACTGCCGATTTATCCCATTTTTGTTTTCATTTGTTCCCCGCTCCCTAGCAc                                                                                                                                                                                                                   >  3:386694/1‑274 (MQ=17)
                     aTCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCATTGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCTTGTTGAGTATATTGAGCAAGTCATTTCTTTTTAGGAAAGTACTCCCGAATTAGCCCTTTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGActc                                                                                                                                                                                                                 >  2:139600/1‑276 (MQ=255)
                     aTCGAAATACGAAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGAct                                                                                                                                                                                                                  <  1:491288/275‑1 (MQ=255)
                               gTAAGCTAAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATTTTAAAAAGGCTACTATAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGATATTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCg                                                                                                                                                                                                        <  1:345859/275‑1 (MQ=255)
                                    cTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCATCCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGGGGAACGCAgga                                                                                                                                                                                                   >  4:16064/1‑273 (MQ=255)
                                      gAGGAAAAAGCTACAACTGATTGAAATGGAGAATGAAATATTAAAAAGGCTACAGTAGAGTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTa                                                                                                                                                                                                <  2:373525/276‑1 (MQ=255)
                                       aGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTTATGTTGAGTATATTGGGCAAGACATGTATTTTTAGGAAAGTACTGCCGTATTAGCTCATTTGTGTTCTCATTTGTTCCTCGCTGCCACGGACTCTGAGGATCGAAGAAGTaa                                                                                                                                                                                               >  4:24126/1‑276 (MQ=255)
                                       aGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTaa                                                                                                                                                                                               >  2:358384/1‑276 (MQ=255)
                                       aGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTa                                                                                                                                                                                                >  1:531389/1‑275 (MQ=255)
                                        ggAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCAGCTTcc                                                                                                                                                                                                                         >  4:640399/1‑249 (MQ=255)
                                           aaaaGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTccc                                                                                                                                                                                                                                <  2:352303/239‑1 (MQ=255)
                                           aaaaGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAg                                                                                                                                                                                                                      <  2:640399/249‑1 (MQ=255)
                                                   cAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTATGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCACGACATGTCTTTTTAGGAAAGTACTGCCTAATTAGCCCATTTGTGTTCCCATTTGTTCTCCGCTGCCAAGTACTCTGAGGCTCGCAGAAGAAAACTTTAACGcc                                                                                                                                                                                    >  3:577161/1‑275 (MQ=255)
                                                        gATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTGTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCt                                                                                                                                                                              <  2:121497/276‑1 (MQ=255)
                                                         aTTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTTGGAAAGACATGTCTTTTTAGGAAAGTACTGCACAATTAGCCCATTTAGGTTCTGATTTTTTTACCGTTGCCATGGACTCTGAGGGTCGCTGGAGTAAACTTTAACCCCgcttatc                                                                                                                                                                             >  4:449070/1‑270 (MQ=14)
                                                          ttGAAATGGGGAATGAAAAATTAAAAAGGCTACTGTAGATTCAATCTGTAAATACAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTg                                                                                                                                                                             <  3:156856/275‑1 (MQ=255)
                                                           tGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAAGTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACAAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCTTTTGTTCCTCGCTGCCAAGGACTCTGACGATATGTGAATGAAACTTTAAAGCCGGTCCTGag                                                                                                                                                                           >  4:421337/1‑275 (MQ=14)
                                                              aagggATAATGAAATCTTAAAAAAGCTACTTTAGATTCAATCTGTCAATGCAACAACCCTTTCTATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGt                                                                                                                                                                        <  4:668180/273‑1 (MQ=255)
                                                               aTGGAGAATGAAATATTAAAAAGGCTACTGTTGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTa                                                                                                                                                                       <  2:391162/276‑1 (MQ=255)
                                                                ttgagaATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTaa                                                                                                                                                                      <  2:296054/274‑1 (MQ=40)
                                                                   agaATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTGTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGCAAGTACTGCCGAATTAGACCATTTGTGTTCTCATTTGTTCCCCTCTGACAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGATTCTGTCAGAAAAtt                                                                                                                                                                   >  2:239172/1‑276 (MQ=255)
                                                                            tatTAAAAAGGCTACTGTAGATTCAATCTGTCACTGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGt                                                                                                                                                           <  1:206386/275‑1 (MQ=25)
                                                                               tAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTCTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGCATTAGCACATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGTCTCTGAGGATCGCAGAAGTAACCTGTAACGCCGGTGCTGACAGTAAAGTCTAGATGTCt                                                                                                                                                         >  3:45188/1‑274 (MQ=255)
                                                                                 aaaaGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTaa                                                                                                                                                                                        <  2:51908/241‑1 (MQ=34)
                                                                                   aaGGCTACTGTATATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTACTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAg                                                                                                                                                   <  2:146209/276‑1 (MQ=17)
                                                                                   aaGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAg                                                                                                                                                   <  2:330596/276‑1 (MQ=32)
                                                                                      gCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACTCCGGTCTTGACAGTAAATTGTATAGTTCTGGCAAGt                                                                                                                                                  >  3:385509/1‑274 (MQ=255)
                                                                                        tACTGGAGATTCAATCTGTCAATGCAACACCCCGTTCAATGATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCa                                                                                                                                              <  2:439046/276‑1 (MQ=14)
                                                                                                                                                                                                     gcattcactttGATTATATTGGGCAAGCCATGGTTTGTGAAGAAACAACTGCCGAATTATCCCTTTTGTTTTCTCATTTGTTCCCCGCTTCCAAGGACTCTGAGGCTCGCGGAAGTAATCTTTAACGCCTGTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCATTCCTCTGTCCCATGTCAGTGATTTTCTGAGTTCTGACGTTAAACTCAGGAATTTGTCTGTAAGAGCCTGATTTACTGAGACAGAATCTTTGCCCCTGGGTCTAAGgat                                 <  4:554990/267‑1 (MQ=1)
                                                                                                                                                                                                      attttaTGTTGAGTATTTTGGTCAAGACAGGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAATTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCATTCCTCTGTCCCATGTCAGTGATTTTCTGAGTTCTGACGGTAAACTCGGGAATTTGTCGGTAAGAGCCTGATTTACTGAGACAGAATCTTTGCCCCTGAGTCTAAGgatg                                <  4:452964/271‑1 (MQ=0)
                                                                                                                                                                                                                        tgtgcaacgcATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCACTGCCAATGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGCTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCCTTCCTCTGTCCCATGTCAGTGATTTTCTGAGTTCTGACGATAATCTCAGGAATTTGTCGGTAAGAGCCTGATTTACTGATACAGAATCTTTGCCCCTGAGTCTAAGGATGATCGTATAACGTGAtttt              <  2:437246/267‑1 (MQ=1)
                                                                                                                                                                                                                        tgtgCAATACATGTCTTTTTAGGAAAGTACTTCCGAATTAGCCCAGTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCATTCCTCTGTCCCATGTCAGTGATTTTCTGAGTTCTGACGGTAAACTCAGGAATTTGTCGGTAAGAGCCTGATTTACTGAGACAGAATCTTTGCCCCTGAGTCTAAGGATGATCGTATAACGTGAtttt              <  4:268701/273‑1 (MQ=1)
                                                                                                                                                                                                                                     tcgtttaAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTGCCCCGCTGCCAAGGACTCTGAAGATCGCAGATGTATACTTTAACGCCGGTGCTGACAGTACATTCTAGATGTCTTGCCAGTTCCATTCCTCTGTCCCATGTCAGTGATTTTCTGAGTTCTGACGGTAACCTCAGGAATTTGTCGGTAAGAGCCTGATTTACTGAGACAGAATCTTTGCCCCTGAGTCTAAGGATGATCGTATAACGTGATTTTCGGTCTACAAgt  <  3:458700/272‑1 (MQ=0)
                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                        
TCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCATTCCTCTGTCCCATGTCAGTGATTTTCTGAGTTCTGACGGTAAACTCAGGAATTTGTCGGTAAGAGCCTGATTTACTGAGACAGAATCTTTGCCCCTGAGTCTAAGGATGATCGTATAACGTGATTTTCGGTCTACAAGT  >  NC_000913/4507368‑4507871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.