New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3423376 =163 (0.630)28 (0.110) 10/286 NT 14.8% intergenic (+182/+47) yhdZ/rrfF putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon
?NC_000913 3423665 = NA (NA)intergenic (‑10/+3) thrV/rrfD tRNA‑Thr/5S ribosomal RNA of rrnD operon

Only 100 of 231 total aligned reads displayed.

GAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAAC  >  NC_000913/3423114‑3423641
                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                         
gAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCACCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACCCGGGAGGGGGTTCACCGACAAACAACAGATAAAACAAAAg                                                                                                                                                                                                                                                                >  2:432317/1‑274 (MQ=255)
gAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAg                                                                                                                                                                                                                                                                <  2:181114/274‑1 (MQ=255)
                atgaATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTTCTTCTCGGGGGAGTGTTCACCGACAAACAACAGCTAAAACAAAAGGCCCAGGCTTCCGACTGAGcc                                                                                                                                                                                                                                           >  1:87848/1‑279 (MQ=255)
                           tgcaagctgaaaGCAGGGAGTAGGAGGGCAGTTGTATCGGAGGTGATCCAGTAATTGAAGGTGAATTCGAAAAGCAAAAAGGCCATCCTTGCGGATGGCCTTTGGCTTGATTTGATGTCTGTCCGTTTGTGGGGGGGGACATGCCCGCCGCCCTCCGGGCCGTTGGTTCGCAACGTTCAAATCCGCTCCCGGCTGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGtt                                                                                                                                                                                                                                    <  4:290094/266‑1 (MQ=17)
                           gcgcAACCTCAAGAAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGAAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGtt                                                                                                                                                                                                                                    <  4:546673/275‑1 (MQ=255)
                                           agCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAACTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACCACAGATAAAACAAAAGGCCCAGTCTTCCCACTGAGCCTTTTGTTTTTTTTGATGTCttg                                                                                                                                                                                                                     >  2:161485/1‑272 (MQ=255)
                                                             attggCAGTTATTCCATTAATTGAATGTGGGTTGGAAAGGGAGAAAGGCCATCTGTTCGGATGGCCTTTCGCTGGTTTTGAGGACTGGGAGTTTAGGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCa                                                                                                                                                                                                   <  4:162571/270‑1 (MQ=14)
                                                                   aGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGga                                                                                                                                                                                             <  2:570237/274‑1 (MQ=255)
                                                                                      tGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTCCCCGCCCCCCTCCGGGCCCTTTCTTCGCAACCTTCAAATCCCCTCCCCGCGGATTTGTCCTACTCGGGCGATGGTTTCCCGACAAACAAAGGATAAAAACAAAGACTCAGTCTACCCACCGAACCATTTGGTTTTTTTGGTGTCTGGAAGTTCCCTACCCCCGCATGGCACGATCCCACACTACCATcca                                                                                                                                                                          >  4:438137/1‑272 (MQ=255)
                                                                                                                  agaagcggtctgataaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaa                                                                                                                                                                                                                                                                           <  5:317590‑M1/1‑1 (MQ=255)
                                                                                                                  agaagcggtctgataaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaa                                                                                                                                                                                                                                                                           <  6:1146888‑M1/1‑1 (MQ=255)
                                                                                                                  agaagcggtctgataaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaa                                                                                                                                                                                                                                                                           >  8:47512‑M1/149‑149 (MQ=255)
                                                                                                                   tttCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGAt                                                                                                                                                                                                                                                                          >  7:775378/1‑149 (MQ=255)
                                                                                                                   gaagcggtctgataaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaAt                                                                                                                                                                                                                                                                          >  6:1307900‑M1/148‑149 (MQ=255)
                                                                                                                   gaagcggtctgataaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaAt                                                                                                                                                                                                                                                                          >  8:1245160‑M1/148‑149 (MQ=255)
                                                                                                                   gaagcggtctgataaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaAt                                                                                                                                                                                                                                                                          <  8:1655721‑M1/2‑1 (MQ=255)
                                                                                                                    ttCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCAt                                                                                                                                           <  2:286508/275‑1 (MQ=255)
                                                                                                                          tGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACaa                                                                                                                                                                                                                                                                   <  5:33715/149‑1 (MQ=255)
                                                                                                                            gCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACaaaa                                                                                                                                                                                                                                                                 >  5:1551661/1‑149 (MQ=255)
                                                                                                                             ccTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAg                                                                                                                                                                                                                                                                <  5:382309/149‑1 (MQ=255)
                                                                                                                                    cTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGt                                                                                                                                                                                                                                                         >  5:760780/1‑149 (MQ=255)
                                                                                                                                     ttgatttgatGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTc                                                                                                                                                                                                                                                        >  7:1503227/1‑149 (MQ=255)
                                                                                                                                         tttgatGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTcc                                                                                                                                                                                                                                                    <  7:65314/149‑1 (MQ=255)
                                                                                                                                               tggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaATAAAACGAAAGGCCCAGTCTTTCGACTGa                                                                                                                                                                                                                                              >  6:1466331‑M1/120‑149 (MQ=255)
                                                                                                                                               gTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGa                                                                                                                                                                                                                                              <  7:569653/149‑1 (MQ=39)
                                                                                                                                                  tGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCTCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACCAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTTATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGCCGCTACGGCGTTTCCCTTCCGAGt                                                                                                                                                  >  1:109090/1‑238 (MQ=255)
                                                                                                                                                  tGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGccc                                                                                                                                                                                                                                                            <  3:47995/132‑1 (MQ=37)
                                                                                                                                                  tGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGcc                                                                                                                                                                                                                                           >  5:1588654/1‑149 (MQ=38)
                                                                                                                                                   ggCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCt                                                                                                                                                                                                                                          >  8:1041705/1‑149 (MQ=37)
                                                                                                                                                    gcatgtaaTGGCGGCCGCCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTgccgc                                                                                                           <  2:404412/268‑1 (MQ=255)
                                                                                                                                                    gcagtagcgcgctggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccagacatcaaATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCtt                                                                                                                                                                                                                                         >  5:1320199‑M1/115‑149 (MQ=255)
                                                                                                                                                     cAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCttt                                                                                                                                                                                                                                        >  8:161231/1‑149 (MQ=38)
                                                                                                                                                       gtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaATAAAACGAAAGGCCCAGTCTTTCGACTGAGcctttcg                                                                                                                                                                                                                                      >  7:1222728‑M1/112‑147 (MQ=255)
                                                                                                                                                         ttATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGtt                                                                                                                                                                                                                                    <  5:853639/149‑1 (MQ=40)
                                                                                                                                                         agcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctcctcatgcgagagtagggaactgccaggcatcaaATAAAACGAAAGGCCCAGTCTTCCGACTGAGCCTTTCGtt                                                                                                                                                                                                                                    >  5:1670913‑M1/110‑149 (MQ=255)
                                                                                                                                                            gcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaATAAAACGAAAGGCCCAGTCTTTCGACTGAgcctttcgt                                                                                                                                                                                                                                     >  7:487328‑M1/107‑142 (MQ=255)
                                                                                                                                                             ggcgggcgTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTAt                                                                                                                                                                                                                                >  6:1294440/1‑149 (MQ=40)
                                                                                                                                                              gcgggcgTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTAtt                                                                                                                                                                                                                               <  5:1606582/149‑1 (MQ=40)
                                                                                                                                                              gcgggcgTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTAtt                                                                                                                                                                                                                               >  8:140521/1‑149 (MQ=40)
                                                                                                                                                                 ggcgTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGa                                                                                                                                                                                                                            <  5:591672/149‑1 (MQ=40)
                                                                                                                                                                  gcgTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGAt                                                                                                                                                                                                                           <  7:254487/149‑1 (MQ=40)
                                                                                                                                                                   tcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaATaaaa                                                                                                                                                                                                                                                                      <  6:80525‑M1/6‑1 (MQ=255)
                                                                                                                                                                        tGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTgg                                                                                                                                                                                                                     >  6:795164/1‑149 (MQ=255)
                                                                                                                                                                              cccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccagacatcaaATGAAACAAAAGGCCCAGTCTTCCGACTGAGCCt                                                                                                                                                                                                                                          <  7:1229102‑M1/34‑1 (MQ=255)
                                                                                                                                                                              cccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccagacatcaaATAAAACAAAAGGCCCAGTCTTCCGACTGAGc                                                                                                                                                                                                                                            >  7:1031431‑M1/89‑120 (MQ=255)
                                                                                                                                                                                 cccTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCTCAGTCGGAAGACTGGGCCttt                                                                                                                                                                                                                                        <  7:86686/121‑1 (MQ=14)
                                                                                                                                                                                    tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGc                                                                                                                                                                                                                                                              >  8:637443/1‑96 (MQ=40)
                                                                                                                                                                                    tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGc                                                                                                                                                                                                                                                              <  7:637443/96‑1 (MQ=255)
                                                                                                                                                                                        actcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaATaaaa                                                                                                                                                                                                                                                                      <  5:875712‑M1/6‑1 (MQ=255)
                                                                                                                                                                                        actcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaATaaaa                                                                                                                                                                                                                                                                      >  6:875712‑M1/79‑84 (MQ=255)
                                                                                                                                                                                          ccGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCa                                                                                                                                                                                                   >  8:163979/1‑149 (MQ=255)
                                                                                                                                                                                          ccGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCa                                                                                                                                                                                                   <  8:397790/149‑1 (MQ=255)
                                                                                                                                                                                            agaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaa                                                                                                                                                                                                                                                                           <  5:227294‑M1/1‑1 (MQ=255)
                                                                                                                                                                                            agaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccagacatcagATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCtt                                                                                                                                                                                                                                         <  6:212475‑M1/35‑1 (MQ=255)
                                                                                                                                                                                             ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCGTgg                                                                                                                                                                                                <  8:281541/149‑1 (MQ=255)
                                                                                                                                                                                              tGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATggg                                                                                                                                                                                               <  6:1020140/149‑1 (MQ=255)
                                                                                                                                                                                              tGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATggg                                                                                                                                                                                               <  8:1666959/149‑1 (MQ=255)
                                                                                                                                                                                              aagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaa                                                                                                                                                                                                                                                                           >  7:1559061‑M1/73‑73 (MQ=255)
                                                                                                                                                                                                    gCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAgtggtg                                                           <  2:219537/275‑1 (MQ=255)
                                                                                                                                                                                                     cAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGAccc                                                                                                                                                                                        >  5:1075857/1‑149 (MQ=255)
                                                                                                                                                                                                      aaCGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGAcccc                                                                                                                                                                                       >  7:1399609/1‑149 (MQ=255)
                                                                                                                                                                                                      aaCGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGAcccc                                                                                                                                                                                       >  7:387569/1‑149 (MQ=255)
                                                                                                                                                                                                          ttCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCacac                                                                                                                                                                                   >  5:94876/1‑149 (MQ=255)
                                                                                                                                                                                                           tCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACt                                                                                                                                                                                  >  6:511505/1‑149 (MQ=255)
                                                                                                                                                                                                              aaTCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACt                                                                                                                                                                                                                                                >  8:1430977/1‑84 (MQ=255)
                                                                                                                                                                                                               agccacTCCCGGCGGATTTGTCCCAACACGGAGGGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGGCGTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCa                                                 <  4:272602/269‑1 (MQ=17)
                                                                                                                                                                                                                tCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCacac                                                                                                                                                                                   >  6:418309/1‑143 (MQ=255)
                                                                                                                                                                                                                tCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCg                                           <  1:280655/279‑1 (MQ=255)
                                                                                                                                                                                                                  cGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGa                                                                                                                                                                                                                                              <  6:1587874/82‑1 (MQ=255)
                                                                                                                                                                                                                       ccGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGAc                                                                                                                                                                                          >  7:913490/1‑129 (MQ=255)
                                                                                                                                                                                                                       ccGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGACAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGAc                                                                                                                                                                                          <  8:913490/129‑1 (MQ=255)
                                                                                                                                                                                                                         ggcggATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATgg                                                                                                                                                                                                <  7:1125924/121‑1 (MQ=255)
                                                                                                                                                                                                                         ggcggATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATgg                                                                                                                                                                                                >  8:1125924/1‑121 (MQ=255)
                                                                                                                                                                                                                               tttGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGtt                                                                                                                                                              >  8:1559724/1‑149 (MQ=255)
                                                                                                                                                                                                                               tttGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGtt                                                                                                                                                              <  6:970847/149‑1 (MQ=255)
                                                                                                                                                                                                                                    ccTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTc                                                                                                                                                                                                                        >  5:1489314/1‑86 (MQ=255)
                                                                                                                                                                                                                                      tACTCGGGAGAGTGTTCACCGACAAAGAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTc                                                                                                                                                       >  7:1045812/1‑149 (MQ=255)
                                                                                                                                                                                                                                      tACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTc                                                                                                                                                       >  5:1185428/1‑149 (MQ=255)
                                                                                                                                                                                                                                      tACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTc                                                                                                                                                       >  7:873077/1‑149 (MQ=255)
                                                                                                                                                                                                                                      tACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTc                                                                                                                                                       >  8:828224/1‑149 (MQ=255)
                                                                                                                                                                                                                                       aCTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt                                                                                                                                                      <  8:1235759/149‑1 (MQ=255)
                                                                                                                                                                                                                                       aCTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt                                                                                                                                                      <  7:1641454/149‑1 (MQ=255)
                                                                                                                                                                                                                                         tCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATgg                                                                                                                                                                                                <  8:332781/105‑1 (MQ=255)
                                                                                                                                                                                                                                         tCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATgg                                                                                                                                                                                                >  7:332781/1‑105 (MQ=255)
                                                                                                                                                                                                                                         tCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGa                                                                                                                                                    >  5:1225193/1‑149 (MQ=255)
                                                                                                                                                                                                                                           gggAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGtttt                                                                                                                                                                                                                                  >  6:1604346/1‑69 (MQ=255)
                                                                                                                                                                                                                                             gagaGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGGCCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTc                                                                                                                                                <  5:470754/149‑1 (MQ=255)
                                                                                                                                                                                                                                             gagaGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACCTCTGAGTTc                                                                                                                                                >  7:178486/1‑149 (MQ=255)
                                                                                                                                                                                                                                               gagTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCgg                                                                                                                                              <  8:871700/149‑1 (MQ=255)
                                                                                                                                                                                                                                                   gctCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGGCTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATg                                                                                                                                          >  6:1041273/3‑149 (MQ=255)
                                                                                                                                                                                                                                                    ggaactgccaggcatcaaATAAAACGAAAGGCCCAGTCTTCCGACTGAGCCtt                                                                                                                                                                                                                                         >  8:528990‑M1/19‑53 (MQ=255)
                                                                                                                                                                                                                                                       atcGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGt                                                                                                                                      >  6:1365408/3‑149 (MQ=255)
                                                                                                                                                                                                                                                           acaaacaaCAGATGAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATg                                                                                                                                                                                                                          >  8:130396/1‑61 (MQ=255)
                                                                                                                                                                                                                                                           acaaacaaCAGATGAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATg                                                                                                                                                                                                                          <  7:130396/61‑1 (MQ=255)
                                                                                                                                                                                                                                                                caacaGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGa                                                                                                                             >  6:642390/1‑149 (MQ=39)
                                                                                                                                                                                                                                                                 aacaGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGa                                                                                                                                                    >  6:365881/1‑125 (MQ=40)
                                                                                                                                                                                                                                                                 aacaGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGac                                                                                                                            >  6:1686886/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                 aacaGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGac                                                                                                                            >  6:488833/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                  acaGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGacc                                                                                                                           >  8:1202820/1‑149 (MQ=39)
                                                                                                                                                                                                                                                                      ATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAgtggt                                                            <  2:472590‑M1/208‑1 (MQ=255)
                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                         
GAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAAC  >  NC_000913/3423114‑3423641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.