New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3721045 =311 (1.200)870 (3.390) 262/288 NT 76.4% noncoding (413/1443 nt) IS150 repeat region
?NC_000913 = 3839774 230 (0.900)coding (220/819 nt) nlpA cytoplasmic membrane lipoprotein‑28

Only 100 of 1274 total aligned reads displayed.

TGGTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTATGAAAAACATGGAGAAAAAGGTTTAATTCCCAAACCTAAAGGCGTTAGTGCTGATCCAGAGTTGCGTATTAAGGTCGTGAAAGCTGTGATCGAGCAGCACATGTCCCTTAATCAGGCTGCTGCTCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTTTTATTATCATCTAAAGGCTCTCAGCAAGCCTGACAAGTATGCGG  >  NC_000913/3720775‑3721321
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                    
cccttttccctctttcagagtaattagcttctccttttgcaacagtaaaagtgcgcgaccaaggttggtcgggtcgttggggatcgccactgtcgcgccttcttttatttgcgccacggttttgatttttttggaataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTg                                                                                                                                                                                                                                                                                  >  2:71994‑M1/271‑275 (MQ=255)
                                                     cgcgaccaaggttggtcgggtcgttggggatcgccactgtcgcgccttcttttatttgcgccacggttttgatttttttggaataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATTACAGTTGAACCAGAAAAAGCGGCATCATACTTTGACCGGTCAAAAGAc                                                                                                                                                                                                                             <  4:346208‑M1/58‑1 (MQ=255)
                                                                    tcgggtcgttggggatcgccactgtcgcgccttcttttatttgcgccacggttttgatttttttggaataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTg                                                                                                                                                                                                          <  1:292220‑M1/77‑1 (MQ=255)
                                                                                  atcgccactgtcgcgccttcttttatttgcgccacggttttgatttttttggaataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTg                                                                                                                                                                                                                                            <  2:253874‑M1/43‑1 (MQ=255)
                                                                                                                 ccacggttttgatttttttggaataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGACTCAGCTTTGGAACTGTCAAAGGACCGACGGCTTGAGGATCTTGAAAGGAAAGTTCGATTTCTTGAAACGCGGCTTATGTATCt                                                                                                                                                                  <  2:602568‑M1/117‑1 (MQ=255)
                                                                                                                           gatttttttggaataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCa                                                                                                                                                                                                                                                                                     >  5:1331620‑M1/148‑149 (MQ=255)
                                                                                                                             cTGTGATCGAGCAGCACATGTCCCTTAATCAGGCTGCTGCTCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACAtt                                                                                                                                                                                                                                                                                   <  5:1626265/149‑1 (MQ=255)
                                                                                                                                 gATCGAGCAGCACATGTCCCTTAATCAGGCTGCTGCTCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATTAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCaa                                                                                                                                                                                                                                                                               >  7:188974/1‑149 (MQ=255)
                                                                                                                                      aataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCTTTGCAATATCa                                                                                                                                                                                                                                                                          >  5:1480709‑M1/137‑149 (MQ=255)
                                                                                                                                      aataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCa                                                                                                                                                                                                                                                                          <  6:299784‑M1/13‑1 (MQ=255)
                                                                                                                                        taacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGt                                                                                                                                                                                                                                                                        >  7:984243‑M1/135‑149 (MQ=255)
                                                                                                                                        cagcaCATGTCCCTTAATCAGGCTGCTGCTCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGt                                                                                                                                                                                                                                                                        <  5:501531/149‑1 (MQ=255)
                                                                                                                                          gcaCATGTCCCTTAATCAGGCTGCTGCTCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCNATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGACTTGAGGAACTTTAAAGNAAAGTTCGATTTTTTGAAAAGCGGTTTAGANNACTAAAAAAACTGAAAGCATTAACTCAACCCNc                                                                                                                                    >  3:124339/1‑279 (MQ=255)
                                                                                                                                              aTGTCCCTTAATCAGGCTGCTGCTCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATcc                                                                                                                                                                                                                                                                  <  6:214380/149‑1 (MQ=255)
                                                                                                                                                     ggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGaaaaa                                                                                                                                                                                                                                                           >  5:1196849‑M1/122‑149 (MQ=255)
                                                                                                                                                            aaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCAt                                                                                                                                                                                                                                                    <  8:77662‑M1/35‑1 (MQ=255)
                                                                                                                                                            aaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCAt                                                                                                                                                                                                                                                    <  7:545373‑M1/35‑1 (MQ=255)
                                                                                                                                                            aaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCAAGAAAAAGCGGCAt                                                                                                                                                                                                                                                    <  6:680262‑M1/35‑1 (MQ=255)
                                                                                                                                                             aacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATc                                                                                                                                                                                                                                                   <  7:1407358‑M1/36‑1 (MQ=255)
                                                                                                                                                                gtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATAACAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCaa                                                                                                                >  1:106169‑M1/111‑277 (MQ=255)
                                                                                                                                                                 tatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCa                                                                                                                                                                                                                                               <  7:1228771‑M1/40‑1 (MQ=255)
                                                                                                                                                                    ttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTg                                                                                                                                                                                                                                            >  7:911996‑M1/107‑149 (MQ=255)
                                                                                                                                                                       ccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAg                                                                                                                                                                                                                                         >  7:46872‑M1/104‑149 (MQ=255)
                                                                                                                                                                        caccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGc                                                                                                                                                                                                                                        <  8:1588274‑M1/47‑1 (MQ=255)
                                                                                                                                                                         tttATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCt                                                                                                                                                                                                                                       >  5:351651/1‑149 (MQ=255)
                                                                                                                                                                         tttATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCt                                                                                                                                                                                                                                       >  7:154894/1‑149 (MQ=255)
                                                                                                                                                                         accgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCt                                                                                                          <  2:424517‑M1/173‑1 (MQ=255)
                                                                                                                                                                          ccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGaa                                                                                                                                                      >  4:102160‑M1/101‑229 (MQ=255)
                                                                                                                                                                          ccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTAc                                                                                                                    <  2:67281‑M1/163‑1 (MQ=255)
                                                                                                                                                                           cgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGt                                                                                                                                                                                                                                     >  6:901326‑M1/100‑149 (MQ=255)
                                                                                                                                                                            gctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgtcCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTc                                                                                                                                                                                                                                    >  8:1187382‑M1/99‑149 (MQ=255)
                                                                                                                                                                                ccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATcc                                                                                                                                                                                                                                                                  >  8:895763‑M1/95‑115 (MQ=255)
                                                                                                                                                                                ccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAACAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTAc                                                                                                                    <  2:37422‑M1/163‑1 (MQ=255)
                                                                                                                                                                                ccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTATTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCaa                                                                                                                >  2:105275‑M1/95‑261 (MQ=255)
                                                                                                                                                                                 cagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGCCAAAAg                                                                                                                                                                                                                               <  6:1122747‑M1/56‑1 (MQ=255)
                                                                                                                                                                                    tGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGAcc                                                                                                                                                                                                                            >  8:1080369/1‑149 (MQ=255)
                                                                                                                                                                                       ataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGAc                                                                                                                                                                                                                         >  7:852034‑M1/88‑149 (MQ=255)
                                                                                                                                                                                         gTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGAt                                                                                                                                                                                                                                                                    >  8:1506895/1‑104 (MQ=255)
                                                                                                                                                                                         aaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGc                                                                                                                                                                                                                       <  7:1020624‑M1/64‑1 (MQ=255)
                                                                                                                                                                                         aaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGc                                                                                                                                                                                                                       >  5:1697047‑M1/86‑149 (MQ=255)
                                                                                                                                                                                            gTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCAtt                                                                                                                                                                                                                                             >  6:476960/1‑124 (MQ=255)
                                                                                                                                                                                             ttCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGAcc                                                                                                                                                                                                                            <  6:824573/140‑1 (MQ=255)
                                                                                                                                                                                              tgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCAtt                                                                                                                                                                                                                                                                                   >  1:139003‑M1/81‑84 (MQ=255)
                                                                                                                                                                                              tgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTgg                                                                                                                                                                                                                                           <  4:81428‑M1/44‑1 (MQ=255)
                                                                                                                                                                                              tgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGa                                                                                                                                                                                                                  >  8:194103‑M1/81‑149 (MQ=255)
                                                                                                                                                                                              tgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATc                                                                                                                                                                   <  3:248538‑M1/116‑1 (MQ=255)
                                                                                                                                                                                              tgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAACAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTtg                                                                                      <  2:175646‑M1/193‑1 (MQ=255)
                                                                                                                                                                                                  cctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGAt                                                                                                                                                                                                              >  8:1334467‑M1/77‑149 (MQ=255)
                                                                                                                                                                                                  cctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGAt                                                                                                                                                                                                              <  7:331671‑M1/73‑1 (MQ=255)
                                                                                                                                                                                                      attatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTg                                                                                                                                                                                                          <  6:971385‑M1/77‑1 (MQ=255)
                                                                                                                                                                                                       ttatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGa                                                                                                                                                                                                         >  8:662657‑M1/72‑149 (MQ=255)
                                                                                                                                                                                                       ttatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGa                                                                                                                                                                                                         <  5:1557719‑M1/78‑1 (MQ=255)
                                                                                                                                                                                                         atcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGaaa                                                                                                                                                                                                       >  7:667494‑M1/70‑149 (MQ=255)
                                                                                                                                                                                                          tcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAg                                                                                                                                                                                                      <  5:593003‑M1/81‑1 (MQ=255)
                                                                                                                                                                                                           cttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTg                                                                                                                                                                                                                                            <  4:686448‑M1/43‑1 (MQ=255)
                                                                                                                                                                                                              tGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCaa                                                                                                                                                                                                  >  5:799260/1‑149 (MQ=255)
                                                                                                                                                                                                              nttcaagaaatggtcgatgctggaagacattcgcancaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGaa                                                                                                                                                      >  4:731947‑M1/65‑193 (MQ=255)
                                                                                                                                                                                                               ttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGa                                                                                                                                                                                                                                          <  8:523502‑M1/45‑1 (MQ=255)
                                                                                                                                                                                                               ttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCaa                                                                                                                                                                                                                                  <  1:21206‑M1/53‑1 (MQ=255)
                                                                                                                                                                                                               ttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAaggccag                                                                                                                                                                                                 <  7:1109801‑M1/86‑4 (MQ=255)
                                                                                                                                                                                                                  aagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCaa                                                                                                                                                                                                                                                                               <  8:1411202‑M1/8‑1 (MQ=255)
                                                                                                                                                                                                                  aagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGa                                                                                                                                                                                                                              >  5:218686‑M1/61‑117 (MQ=255)
                                                                                                                                                                                                                  aagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTc                                                                                                                                                                                              >  6:1301765‑M1/61‑149 (MQ=255)
                                                                                                                                                                                                                  aagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTc                                                                                                                                                                                              <  8:578268‑M1/89‑1 (MQ=255)
                                                                                                                                                                                                                  aagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTc                                                                                                                                                                                              <  8:295441‑M1/89‑1 (MQ=255)
                                                                                                                                                                                                                    gaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGa                                                                                                                                                                                            >  7:719604‑M1/59‑149 (MQ=255)
                                                                                                                                                                                                                    gaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGa                                                                                                                                                                                            <  5:88047‑M1/91‑1 (MQ=255)
                                                                                                                                                                                                                        tGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTc                                                                                                                                                                                        >  8:1256051/1‑149 (MQ=255)
                                                                                                                                                                                                                        tGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATa                                                            <  2:543748/273‑1 (MQ=255)
                                                                                                                                                                                                                         ggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCt                                                                                                                                                                                       >  7:786887‑M1/54‑149 (MQ=255)
                                                                                                                                                                                                                         ggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCt                                                                                                                                                                                       >  5:1404718‑M1/54‑149 (MQ=255)
                                                                                                                                                                                                                          gtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCtt                                                                                                                                                                                      <  6:1656853‑M1/97‑1 (MQ=255)
                                                                                                                                                                                                                             gatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgtaCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGaa                                                                                                                                                                                   <  7:1309661‑M1/100‑1 (MQ=255)
                                                                                                                                                                                                                                 ctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAAcgc                                                                                                                                                                               >  7:283707‑M1/46‑149 (MQ=255)
                                                                                                                                                                                                                                  tggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAAcgcg                                                                                                                                                                              >  7:1651755‑M1/45‑149 (MQ=255)
                                                                                                                                                                                                                                        acattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTAt                                                                                                                                                                        >  5:971385‑M1/39‑149 (MQ=255)
                                                                                                                                                                                                                                           ttcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGa                                                                                                                                                                                                                  <  8:1659753‑M1/69‑1 (MQ=255)
                                                                                                                                                                                                                                           ttcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTa                                                                                                                                                                     <  6:546034‑M1/114‑1 (MQ=255)
                                                                                                                                                                                                                                            gTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTAt                                                                                                                                                                    >  6:1396404/1‑149 (MQ=255)
                                                                                                                                                                                                                                            gTTTACACGAGCGCAAAATTGGCACAAAAAGAAACATTGCAATAGCAGTTGAGCCAGAAAAAGCGGCATCAGCACTGGGGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTTTtattat                                       <  4:279154/274‑1 (MQ=255)
                                                                                                                                                                                                                                                atcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAg                                                                                                                                                                                                      <  6:1711904‑M1/81‑1 (MQ=255)
                                                                                                                                                                                                                                                 tcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTg                                                                                                                                                                                                          <  6:373907‑M1/77‑1 (MQ=255)
                                                                                                                                                                                                                                                    agttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTaaaaaa                                                                                                                                                            >  8:699183‑M1/27‑149 (MQ=255)
                                                                                                                                                                                                                                                      ttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAAc                                                                                                                                                                                 >  8:384925‑M1/25‑126 (MQ=255)
                                                                                                                                                                                                                                                       ttcccatgattgttcgcatcgttCATTGCAAAATCAGTTGATCCAGAAAAAGGGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTTTTATTATCATCTaa                                >  4:4332‑M1/24‑270 (MQ=255)
                                                                                                                                                                                                                                                       tcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTtgat                                                                                    >  2:77746‑M1/24‑218 (MQ=255)
                                                                                                                                                                                                                                                          ccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGa                                                                                                                                                                                                                          >  8:450467‑M1/21‑81 (MQ=255)
                                                                                                                                                                                                                                                            atgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAg                                                                                                                                                    >  6:601975‑M1/19‑149 (MQ=255)
                                                                                                                                                                                                                                                             aTTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGc                                                                                                                                                   <  6:1204250/149‑1 (MQ=255)
                                                                                                                                                                                                                                                              gtgttgacggatcgctCAGTGCAATATCAGTTGAACCAGAAAAAGCGGCATCAGGATTGGAGCTGGAAAAAGAACGACGCAATGAGGAGCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATATATCTAAAAAAGACGAAAGCATTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTTGTATTATCATCTAAAGGCTCTCAGCa                    >  4:196493‑M1/17‑275 (MQ=255)
                                                                                                                                                                                                                                                              gatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTTTTATTATCATCTAAAGGc                            >  2:309639‑M1/17‑267 (MQ=255)
                                                                                                                                                                                                                                                                  tgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAg                                                                                                                                              >  6:1571668‑M1/13‑149 (MQ=255)
                                                                                                                                                                                                                                                                   gtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGc                                                                                                                                             <  5:447559‑M1/138‑1 (MQ=255)
                                                                                                                                                                                                                                                                   aCCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCGTCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCtt                                                                                                                                                                          <  5:1077886/120‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAg                                                                                                                                              >  6:1492709‑M1/9‑145 (MQ=255)
                                                                                                                                                                                                                                                                      gcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCa                                                                                                                                          <  7:1480943‑M1/141‑1 (MQ=255)
                                                                                                                                                                                                                                                                         tcgttCATTGAAATATCAGTTAATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTTTTATTATCATCTAAAGGCTCTCAGCAAGCCTGACaa          >  2:475425‑M1/6‑274 (MQ=255)
                                                                                                                                                                                                                                                                          cgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATccc                                                                                                                                      >  5:299784‑M1/5‑149 (MQ=255)
                                                                                                                                                                                                                                                                            ttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCgg                                                                                                                                                                             >  7:417511‑M1/3‑108 (MQ=255)
                                                                                                                                                                                                                                                                             tCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAgg                                                                                                      >  4:554966‑M1/2‑178 (MQ=255)
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                    
TGGTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTATGAAAAACATGGAGAAAAAGGTTTAATTCCCAAACCTAAAGGCGTTAGTGCTGATCCAGAGTTGCGTATTAAGGTCGTGAAAGCTGTGATCGAGCAGCACATGTCCCTTAATCAGGCTGCTGCTCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTTTTATTATCATCTAAAGGCTCTCAGCAAGCCTGACAAGTATGCGG  >  NC_000913/3720775‑3721321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.