New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4534768 =305 (1.180)4 (0.020) 4/282 NT 1.3% intergenic (‑93/‑23) yjhZ/yjhR pseudogene, rimK paralog, C‑terminal fragment/pseudogene, helicase family; putative frameshift suppressor
?NC_000913 4534790 = 295 (1.170)intergenic (‑115/‑1) yjhZ/yjhR pseudogene, rimK paralog, C‑terminal fragment/pseudogene, helicase family; putative frameshift suppressor
Rejected: Frequency below/above cutoff threshold.

Only 100 of 337 total aligned reads displayed.

TCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATA  >  NC_000913/4534504‑4535030
                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                      
tCACACCTGCTTTGGTTAGTGAAAAACCGTTCTCTTTTATTCCGTCAATCGTGGCTGTAATTGCTTCAATTGCATAGCCCTGACGAGCATAAGCTGGACTGATGGTATAACCGAGCCAAAACACATCGCATTACTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACGATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCt                                                                                                                                                                                                                                                               <  4:373765/274‑1 (MQ=255)
         cTTTGATGAGTGAAAAACCGTTATCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCa                                                                                                                                                                                                                                                     <  2:374039/275‑1 (MQ=255)
                                                                                       cATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCg                                                                                                                                                                                                                                                  >  2:552138/1‑200 (MQ=255)
                                                                                                           taGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTAtt                                                                                                                                                                                                                                              >  1:277722/1‑184 (MQ=255)
                                                                                                                    gatgatgttattgaaacagcgacgatgctcatacagatacattccgcgctcgaacttgggatcatactggtagtgagagttgaactgggctacctgcattacgctgccagatgctgcactttttccagacccatttattatcgaatacg                                                                                                                                                                                                                                                                        <  5:10814‑M1/1‑1 (MQ=255)
                                                                                                                     atgatgttattgaaacagcgacgatgctcatacagatacattccgcgctcgaacttgggatcatactggtagtgagagttgaactgggctacctgcattacgctgccagatgctgcactttttccagacccatttattatcgaatacgg                                                                                                                                                                                                                                                                       >  7:722200‑M1/148‑149 (MQ=255)
                                                                                                                     aaaaCACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAgg                                                                                                                                                                                                                                                                       >  8:713023/1‑149 (MQ=255)
                                                                                                                      aaaCACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGt                                                                                                                                                                                                                                                                      <  5:228487/149‑1 (MQ=255)
                                                                                                                        acacATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTgg                                                                                                                                                                                                                                                                    >  5:1416751/1‑149 (MQ=255)
                                                                                                                            aTCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAgcg                                                                                                                                             >  2:520116/1‑264 (MQ=255)
                                                                                                                             tCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCt                                                                                                                                                                                                                                                               >  8:792931/1‑149 (MQ=255)
                                                                                                                                cATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTTACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGa                                                                                                                                         <  4:520112/264‑1 (MQ=255)
                                                                                                                                         acgatgctcatacagatacattccgcgctcgaacttgggatcatactggtagtgagagttgaactgggctacctgcattacgctgccagatgctgcactttttccagacccatttattatcgaatacGGTGGCCGCTCAGGCGGTCAcc                                                                                                                                                                                                                                                   >  8:1359534‑M1/128‑149 (MQ=255)
                                                                                                                                              aTAGGTAGCACCAATCAAAGCCTGCGTCAGTTGTTGACAGTGTACAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGAAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTAtt                                                                                                                                                                                                                                              >  6:1443028/1‑149 (MQ=38)
                                                                                                                                                 gATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGa                                                                                                                                                                                                                                           <  8:5310/149‑1 (MQ=255)
                                                                                                                                                 gATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGa                                                                                                                                                                                                                                           <  6:748246/149‑1 (MQ=255)
                                                                                                                                                  atatCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACACTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACAGTATTCGAAAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCCGCGTAATGAAGGTAGCCCAGTACACCTCACACTACCTGTTTGATCTCAAGATCGCGCGAGTACTTTACATGTCTGGGCATCGTAGCTGttt                                                                                                            >  4:414879/1‑275 (MQ=255)
                                                                                                                                                   tatCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGata                                                                                                                                                                                                                                         >  7:987803/1‑149 (MQ=255)
                                                                                                                                                             cAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGt                                                                                                                                                                                                                               <  7:843970/149‑1 (MQ=255)
                                                                                                                                                               aaaCCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCt                                                                                                                                                                                                                             >  7:173911/1‑149 (MQ=255)
                                                                                                                                                               aaaCCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCt                                                                                                                                                                                                                             >  5:1273102/1‑149 (MQ=255)
                                                                                                                                                                       gTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTg                                                                                                                                                                                                                                                                     <  5:941172/101‑1 (MQ=255)
                                                                                                                                                                       gTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAg                                                                                                                                                                                                                     <  5:324514/149‑1 (MQ=255)
                                                                                                                                                                        tCATTTGTTGACGATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTCACTGCCCACGAGTAAAGGTGGCCGCTCAGGCTGTCGCCGTATTCGATAATAAATGGGTCTGGAAAAAGt                                                                                                                                                                                                                    >  6:993769/1‑149 (MQ=255)
                                                                                                                                                                        tCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGt                                                                                                                                                                                                                    >  5:626784/1‑149 (MQ=255)
                                                                                                                                                                        tCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGt                                                                                                                                                                                                                    <  5:162575/149‑1 (MQ=255)
                                                                                                                                                                          aTTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTg                                                                                                                                                                                                                   >  5:1667775/1‑148 (MQ=255)
                                                                                                                                                                                tgACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATc                                                                                                                                                                                                            <  5:694487/149‑1 (MQ=255)
                                                                                                                                                                                 gACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCt                                                                                                                                                                                                           >  7:664155/1‑149 (MQ=255)
                                                                                                                                                                                 gACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCt                                                                                                                                                                                                           >  7:470131/1‑149 (MQ=255)
                                                                                                                                                                                    aaTGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCt                                                                                                                                                                                                           >  5:734154/1‑146 (MQ=255)
                                                                                                                                                                                    aaTGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGc                                                                                                                                                                                                        >  8:1657392/1‑149 (MQ=255)
                                                                                                                                                                                     aTGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCa                                                                                                                                                                                                       <  5:413396/149‑1 (MQ=255)
                                                                                                                                                                                         ccAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGt                                                                                                                                                                                                   >  7:276902/1‑149 (MQ=255)
                                                                                                                                                                                         ccAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGt                                                                                                                                                                                                   >  7:782419/1‑149 (MQ=255)
                                                                                                                                                                                          cAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTc                                                                                                                                                                                                                                             <  7:1022578/106‑1 (MQ=255)
                                                                                                                                                                                          cAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTc                                                                                                                                                                                                                                             >  8:1022578/1‑106 (MQ=255)
                                                                                                                                                                                           aaTTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAg                                                                                                                                                                                                                                                                        <  6:1205045/78‑1 (MQ=255)
                                                                                                                                                                                           aaTTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAg                                                                                                                                                                                                                                                                        >  5:1205045/1‑78 (MQ=255)
                                                                                                                                                                                                 atatCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAgg                                                                                                                                                                                           >  5:795514/1‑149 (MQ=255)
                                                                                                                                                                                                   atggcgAGGAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTTTGTAACAGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGCTAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTg                                                           <  4:635928/272‑1 (MQ=255)
                                                                                                                                                                                                    tCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAg                                                                                                                                                                                        >  7:1396182/1‑149 (MQ=255)
                                                                                                                                                                                                      gcgAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGcc                                                                                                                                                                                      <  8:173911/149‑1 (MQ=255)
                                                                                                                                                                                                        gAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCa                                                                                                                                                                                    <  8:470131/149‑1 (MQ=255)
                                                                                                                                                                                                                gtAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAAct                                                                                                                                                                            >  5:150757/1‑149 (MQ=255)
                                                                                                                                                                                                                 tAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAActc                                                                                                                                                                           >  8:362878/1‑149 (MQ=255)
                                                                                                                                                                                                                 ctgcattacgctgccagatgctgcactttttccagacccatttattatcgaatacGGTGGCCGCTCAGGCGGTCACCGTAtt                                                                                                                                                                                                                                              >  8:1553704‑M1/56‑82 (MQ=255)
                                                                                                                                                                                                                 ctgcattaagctgccagatgctgcactttttccagacccatttattatcgaatacGGTGGCCGCTCAGGCGGTCACCGTAtt                                                                                                                                                                                                                                              <  7:1553704‑M1/27‑1 (MQ=255)
                                                                                                                                                                                                                   aGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACtctc                                                                                                                                                                         <  5:1720520/149‑1 (MQ=255)
                                                                                                                                                                                                                        tCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTAc                                                                                                                                                                    >  7:647168/1‑149 (MQ=255)
                                                                                                                                                                                                                         cccAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAAt                                                                                                                                                                                                >  1:117688/1‑120 (MQ=255)
                                                                                                                                                                                                                          ccAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTAc                                                                                                                                                                    >  5:455810/1‑147 (MQ=255)
                                                                                                                                                                                                                          ccAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTAc                                                                                                                                                                    <  6:455810/147‑1 (MQ=255)
                                                                                                                                                                                                                                    ccTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATccc                                                                                                                                                        <  6:1416751/149‑1 (MQ=255)
                                                                                                                                                                                                                                    ccTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATccc                                                                                                                                                        >  8:747630/1‑149 (MQ=255)
                                                                                                                                                                                                                                    ccTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATccc                                                                                                                                                        >  6:117343/1‑149 (MQ=255)
                                                                                                                                                                                                                                     cTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATccc                                                                                                                                                        >  8:850353/1‑148 (MQ=255)
                                                                                                                                                                                                                                     cTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCa                                                                                                                                                       >  6:1717729/1‑149 (MQ=255)
                                                                                                                                                                                                                                     cTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCa                                                                                                                                                       >  8:672015/1‑149 (MQ=255)
                                                                                                                                                                                                                                     cTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCa                                                                                                                                                       >  5:464547/1‑149 (MQ=255)
                                                                                                                                                                                                                                      tGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCaa                                                                                                                                                      >  6:1306323/1‑149 (MQ=255)
                                                                                                                                                                                                                                      tGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCaa                                                                                                                                                      <  7:366498/149‑1 (MQ=255)
                                                                                                                                                                                                                                      tGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCAtcgtcg                                                                                                                  <  4:252961/185‑1 (MQ=255)
                                                                                                                                                                                                                                       gTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTcc                       >  4:94948/1‑275 (MQ=255)
                                                                                                                                                                                                                                        tatataatTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGt                                                                                                                                                    >  5:208082/4‑149 (MQ=255)
                                                                                                                                                                                                                                        tAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACtctc                                                                                                                                                                         <  8:1120411/128‑1 (MQ=255)
                                                                                                                                                                                                                                        tAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACtctc                                                                                                                                                                         >  7:1120411/1‑128 (MQ=255)
                                                                                                                                                                                                                                        tAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAaga                                               >  2:178079/1‑250 (MQ=255)
                                                                                                                                                                                                                                           ataatTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAgg                                                                                                                                                                                           <  5:1147056/107‑1 (MQ=255)
                                                                                                                                                                                                                                           ataatTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAgg                                                                                                                                                                                           >  6:1147056/1‑107 (MQ=255)
                                                                                                                                                                                                                                           ataatTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCg                                                                                                                                                 >  8:570931/1‑149 (MQ=255)
                                                                                                                                                                                                                                            caatTTTGTGTAACTGACCACGATTAAAGGTGGCCGCTCAGGCGGTTACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCa                  <  2:130025/274‑1 (MQ=255)
                                                                                                                                                                                                                                               ttCTGTGTCACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCAc                                                                                                                                                                       >  7:1184605/1‑123 (MQ=255)
                                                                                                                                                                                                                                                 cTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGcgcg                                                                                                                                           <  6:600413/149‑1 (MQ=255)
                                                                                                                                                                                                                                                  tgtgTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGa            >  2:4026/1‑275 (MQ=255)
                                                                                                                                                                                                                                                  tgtgTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGAATTTCCCCGCAATGGGa            >  2:255705/1‑275 (MQ=255)
                                                                                                                                                                                                                                                    tgtAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTgg                                                                                                                                                                                                         <  3:51403/84‑1 (MQ=255)
                                                                                                                                                                                                                                                    tgtAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTCATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTa                                                                        >  1:89840/1‑213 (MQ=255)
                                                                                                                                                                                                                                                    tgtAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCNGTTCAACTCTCACTACCAGTATGNNCCCAAGTTNGAGCGCGGAATGTAt                                                                                                                                   >  3:58585/1‑154 (MQ=255)
                                                                                                                                                                                                                                                    tgtAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTACCTGTATGAGCATCGTCGCTGTTTCAATAAATTCATCGACTACTGTAACTCACTTTGCTATCCCGGTAATTTGCAGCCGAAAAAAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGaaa          >  4:101500/1‑273 (MQ=255)
                                                                                                                                                                                                                                                      ccatttattatcgaatacGGTGACCGCCTGAGCGGCCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATg                                                                                                                                      <  7:1263968‑M1/131‑1 (MQ=255)
                                                                                                                                                                                                                                                       aaCTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGt                                                                                                                                     >  6:1599560/1‑149 (MQ=255)
                                                                                                                                                                                                                                                        aCTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTa                                                                                                                                    <  6:1035993/149‑1 (MQ=255)
                                                                                                                                                                                                                                                        aCTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGa            <  2:338645/269‑1 (MQ=255)
                                                                                                                                                                                                                                                         cTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATccc                                                                                                                                                        <  6:464167/128‑1 (MQ=255)
                                                                                                                                                                                                                                                          tGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATc                                                                                                                                  >  8:1298740/1‑149 (MQ=255)
                                                                                                                                                                                                                                                          tGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATc                                                                                                                                  <  6:69842/149‑1 (MQ=255)
                                                                                                                                                                                                                                                          tGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATc                                                                                                                                  >  6:93638/1‑149 (MQ=255)
                                                                                                                                                                                                                                                            cccACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTAt                                                                                                                                                                                                                                               >  4:430670/1‑38 (MQ=255)
                                                                                                                                                                                                                                                             ccACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGt                                                                                                                               >  7:538052/1‑149 (MQ=255)
                                                                                                                                                                                                                                                              cACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGt                                                                                                                                     >  1:54989/1‑142 (MQ=255)
                                                                                                                                                                                                                                                              cACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTa                                                                                                                              >  8:249260/1‑149 (MQ=255)
                                                                                                                                                                                                                                                              cACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTa                                                                                                                              >  8:394537/1‑149 (MQ=255)
                                                                                                                                                                                                                                                              cACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTa                                                                                                                              >  6:368109/1‑149 (MQ=255)
                                                                                                                                                                                                                                                              cACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAAt                                                                                                        >  2:71935/1‑171 (MQ=255)
                                                                                                                                                                                                                                                               aCGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTAt                                                                                                                             <  6:296090/149‑1 (MQ=255)
                                                                                                                                                                                                                                                               aCGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTAt                                                                                                                             >  5:575297/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                cGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGa                                                                                                                                                                                                                                           <  2:430674/38‑1 (MQ=255)
                                                                                                                                                                                                                                                                 gATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGa                                                                                                                           <  6:165622/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                 gATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGa                                                                                                                           <  7:570931/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                      
TCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCTGCGTCATTTGTTGACAATGGCCAATTGAATATCGCGAGCAAGTGTAAGAACTCCCAGCAAGACCCTGTAAATAATTCTGTGTAACTGCCCACGATTAAAGGTGGCCGCTCAGGCGGTCACCGTATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGATTTTCCCCGCAATGGGATATTTACATA  >  NC_000913/4534504‑4535030

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.