New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =135 (0.520)129 (0.560) 91/258 NT 50.5% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 1209619 = 133 (0.580)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 314 total aligned reads displayed.

GAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGAAGCTGGATCGGCTGGGGCGT  >  NC_000913/1209361‑1209888
                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                              
 ccccgttgccactgcattgataggtgcgctgacattgtcataatttgcaacaacggcaacacaggcattattaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgcttgctcaatacccccaatcataaccggtatagctatgaaaccggctcgtcataatgtagccgttgctgcatttcgttttgctccttcacccaaacaaacgctttcaagagcagtt                                                                                                                                                                                                                                                                >  4:258299‑M2/258‑262 (MQ=255)
                  cATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACAAACGTTTAAGAAAATGAAGAAATAACAAGCAAATGGcatca                                                                                                                                                                                                                                          >  1:10177/1‑279 (MQ=255)
                                   aaaaTAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGNAATGCAGAGCCTTCTCCCAACCCAACGTTTATGAAAATGAAAAAATAAAAAACAAAGGGCATCATTCCAGCTTTTaaaagg                                                                                                                                                                                                                         >  3:222243/1‑274 (MQ=255)
                                     aaTAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCt                                                                                                                                                                                                                                  <  2:334891/268‑1 (MQ=255)
                                          agCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAATCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAATTGAAGAAATAACAAGCAAATGCCATCATTCCTGATTTTACCAggggg                                                                                                                                                                                                                      >  2:519659/1‑275 (MQ=255)
                                                 tGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTAGTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                                                                                                                                                                                               <  2:449283/275‑1 (MQ=255)
                                                  ttATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                                                                                                                                                              <  2:584448/274‑1 (MQ=255)
                                                  gTATTAACCACCCGCCCGTCATCCCAACCCCGCATAAACTCACCACGTACATCAGGCAATTTATTTGTCGTCTAAGCCTTTGCCAGTTCCGGGCATTCTTCAGCATGAAAAGCGGCACCATTGCATGTCATCCAGCCGGTTGGCGGAGTGACTGAAGGCCACGGAACCGGAACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGGTTATGAGAATGATAAAATCACAAGCAAATGGCATCATGCCTACTTGTACCAGAGGTATTTAACa                                                                                                                                                                                                              <  4:621904/275‑1 (MQ=255)
                                                         gaccccGCCCGTCATCACGGCCGAGAATAACATCACCACGTAAATGAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAAGAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                                                                                                                                                    <  1:193873/276‑1 (MQ=255)
                                                             ccgcctgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                                                                                                                                                                                                   >  4:424529/1‑275 (MQ=255)
                                                                                 ccgggaatacaactgtatttccatcccccccagaggcagattcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGAc                                                                                                                                                                          <  1:229383‑M2/102‑1 (MQ=255)
                                                                                             cacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAg                                                                                                                                                                                                                                                      >  4:166344/1‑192 (MQ=255)
                                                                                               cGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAg                                                                                                                                                                <  2:10898/275‑1 (MQ=255)
                                                                                                 tAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCaaa                                                                                                                                                                                                                                                  <  2:166347/192‑1 (MQ=255)
                                                                                                    aTCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTa                                                                                                                                                           <  2:661396/275‑1 (MQ=255)
                                                                                                         gCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGATAAAGCGGCACCATTGCATTTCCTCCAGCCTGTTGGCGAAGTGGCTGAAGGCCACGGCACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCACCGTTTATGAAAATGAAGAAATAACAGAACAATGGCATCATTCCTTCTTTTACACGGGGGATTTAAACAGCTTATTGGCTATGTACGCCGTA‑CAACAAATGACCA‑Aacacccaacatacaact                                                                                                                                                     >  4:83516/1‑262 (MQ=255)
                                                                                                                    gcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTAt                                                                                                                                                                                                                                                                          <  6:1646253‑M2/7‑1 (MQ=255)
                                                                                                                     tCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATg                                                                                                                                                                                                                                                                         >  8:410324/1‑149 (MQ=255)
                                                                                                                       gatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaa                                                                                                                                                                                                                                                                       >  5:1016048‑M2/140‑149 (MQ=255)
                                                                                                                       gatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGa                                                                                                                                                                                                                                                                        >  5:1088443‑M2/140‑148 (MQ=255)
                                                                                                                       gatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGa                                                                                                                                                                                                                                                                        <  6:1088443‑M2/9‑1 (MQ=255)
                                                                                                                        gATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTGCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGaaa                                                                                                                                                                                                                                                                      >  6:1403510/1‑149 (MQ=255)
                                                                                                                        atgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaaa                                                                                                                                                                                                                                                                      >  5:705229‑M2/139‑149 (MQ=255)
                                                                                                                         tgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaaaa                                                                                                                                                                                                                                                                     <  6:991875‑M2/12‑1 (MQ=255)
                                                                                                                             tttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaa                                                                                                                                                                                                                                                                 <  8:106344‑M2/16‑1 (MQ=255)
                                                                                                                             gCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaa                                                                                                                                                                                                                                                                 <  7:893628/149‑1 (MQ=255)
                                                                                                                                tttGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaagaa                                                                                                                                                                                                                                                              >  7:1140615/1‑149 (MQ=255)
                                                                                                                                  tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAtt                                                                                                                                                                                                      >  4:124119/1‑203 (MQ=255)
                                                                                                                                     attccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAAc                                                                                                                                                                                                                                                         <  5:1672053‑M2/24‑1 (MQ=255)
                                                                                                                                          acccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcttcctaatgtatccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCa                                                                                                                                                                                                                                                    >  8:156291‑M2/121‑149 (MQ=255)
                                                                                                                                             cccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                                                                                                                                                                                                 <  7:107623‑M2/32‑1 (MQ=255)
                                                                                                                                              gTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATg                                                                                                                                                                                                                                                <  7:719403/149‑1 (MQ=255)
                                                                                                                                              gTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATg                                                                                                                                                                                                                                                <  6:1147611/149‑1 (MQ=255)
                                                                                                                                                   cttcATCAAAAAAAGCGGCACCATTGCATTTCTTGCAGCCGGTTGGCGTGGTGGCTTATGGCCACGGAACCGTGACACCAACAAGTAATGCAGAGCCTTCTCCCAACCCAACGTTGATGAAAATGAAGAAATAACAAGCAAATGGCATCAGTCCTGCTTGTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACGGATCTACAACGGAATGCGCTGAACTGTGCAAGATGCGAGCTGATTTTTGAAg                                                                                                             <  4:334730/274‑1 (MQ=255)
                                                                                                                                                            ctgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCt                                                                                                                                                                                                                                  <  6:391589‑M2/47‑1 (MQ=255)
                                                                                                                                                            aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAg                                                                                                   >  2:213175/1‑275 (MQ=255)
                                                                                                                                                              gattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCttt                                                                                                                                                                                                                                <  7:628325‑M2/49‑1 (MQ=255)
                                                                                                                                                              gattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCttt                                                                                                                                                                                                                                >  6:493800‑M2/101‑149 (MQ=255)
                                                                                                                                                              gattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAac                                                                                                                                                                    >  2:31695‑M2/101‑208 (MQ=255)
                                                                                                                                                              aaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCaaa                                                                                                                                                                                                                                                  <  7:580373/131‑1 (MQ=255)
                                                                                                                                                                aGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAg                                                                                                                                                                <  2:270456/210‑1 (MQ=255)
                                                                                                                                                                    gCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAc                                                                                                                                                                                                                             >  7:789491/1‑146 (MQ=255)
                                                                                                                                                                    gCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAc                                                                                                                                                                                                                             <  8:789491/146‑1 (MQ=255)
                                                                                                                                                                     cACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCATCGTTTATGACAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg                                                                                                                                                                                                                         <  5:1211759/149‑1 (MQ=255)
                                                                                                                                                                      aataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                                                                                                                                                                                                        <  5:775987‑M2/57‑1 (MQ=255)
                                                                                                                                                                      aCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                                                                                                                                                                                                        <  6:1228297/149‑1 (MQ=255)
                                                                                                                                                                       ccATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGAGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgggg                                                                                                                                                                                                                       <  8:552617/149‑1 (MQ=255)
                                                                                                                                                                       ataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgggg                                                                                                                                                                                                                       <  6:1504377‑M2/58‑1 (MQ=255)
                                                                                                                                                                        taccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGca                                                                                                                                                                                                                                             >  8:248034‑M2/91‑126 (MQ=255)
                                                                                                                                                                          ccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAt                                                                                                                                                                                                                    <  7:835717‑M2/61‑1 (MQ=255)
                                                                                                                                                                           caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAtt                                                                                                                                                                                                                   >  8:516862‑M2/88‑149 (MQ=255)
                                                                                                                                                                           caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAtt                                                                                                                                                                                                                   >  6:620087‑M2/88‑149 (MQ=255)
                                                                                                                                                                                atcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGca                                                                                                                                                                                                                                             >  8:1354376‑M2/83‑118 (MQ=255)
                                                                                                                                                                                atcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGca                                                                                                                                                                                                                                             <  7:1354376‑M2/36‑1 (MQ=255)
                                                                                                                                                                                 tcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                                                                                                                                                                                             <  6:1002098‑M2/68‑1 (MQ=255)
                                                                                                                                                                                 tCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                                                                                                                                                                                             <  7:1396023/149‑1 (MQ=255)
                                                                                                                                                                                    taaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCt                                                                                                                                                                                                          >  6:660557‑M2/79‑149 (MQ=255)
                                                                                                                                                                                         ccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTg                                                                                                                                                                                                     <  7:1194988/149‑1 (MQ=255)
                                                                                                                                                                                         ccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTg                                                                                                                                                                                                     <  8:1656721/149‑1 (MQ=255)
                                                                                                                                                                                          gtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                                                                                                                                                    <  6:776593‑M2/77‑1 (MQ=255)
                                                                                                                                                                                          gtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                                                                                                                                                    <  7:1523423‑M2/77‑1 (MQ=255)
                                                                                                                                                                                           tGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                                                                                                                                                                                                   <  6:53447/149‑1 (MQ=255)
                                                                                                                                                                                           tGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                                                                                                                                                                                                   >  6:973556/1‑149 (MQ=255)
                                                                                                                                                                                            gTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCt                                                                                                                                                                                                  <  5:1127253/149‑1 (MQ=255)
                                                                                                                                                                                               gctatgaaaccggtgcttcctaatgtagccgttgctgcattgagttttgctccttctccccaaccaaCGTTTATGAACATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGTGATTTAACATGCTTATTGACTATGTACG‑CTTATCAACAAATGACAAGAACACAGATCTACAGCGTAATGCGCTGACCTGTCAAGGCTGCGGGCTGCTTTTTGAAGACAAGATAAGCGGCACAAAgtcggacaggccggaatggcaaacac                                                                >  4:486911‑M2/68‑263 (MQ=255)
                                                                                                                                                                                                gCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGt                                                                                                                                                                                              <  8:647266/149‑1 (MQ=255)
                                                                                                                                                                                                ctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatc                                                                                                                                                                                                                                           >  2:104672‑M2/67‑104 (MQ=255)
                                                                                                                                                                                                ctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTcc                                                                                                                                                                                                                                      <  8:68845‑M2/43‑1 (MQ=255)
                                                                                                                                                                                                    gaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                                                                                                                                                       <  4:104671‑M2/42‑1 (MQ=255)
                                                                                                                                                                                                    gaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcg‑c                                                                                                                                                                                         <  5:890469‑M2/87‑1 (MQ=255)
                                                                                                                                                                                                    aGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcg‑c                                                                                                                                                                                         <  5:384001/149‑1 (MQ=255)
                                                                                                                                                                                                    aGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcg‑c                                                                                                                                                                                         <  5:505106/149‑1 (MQ=255)
                                                                                                                                                                                                                   taatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGAc                                                                                                                                                                          <  5:720989‑M2/102‑1 (MQ=255)
                                                                                                                                                                                                                    ggAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGAcc                                                                                                                                                                         <  5:97468/149‑1 (MQ=255)
                                                                                                                                                                                                                           ccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaaga                                                                                                                                                                                                                                                               <  3:35743‑M2/18‑1 (MQ=255)
                                                                                                                                                                                                                           ccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaaga                                                                                                                                                                                                                                                               >  1:35743‑M2/40‑57 (MQ=255)
                                                                                                                                                                                                                           ccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAg                                                                                                                                                                                                                                                      >  2:417225‑M2/40‑66 (MQ=255)
                                                                                                                                                                                                                            gACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAAcaca                                                                                                                                                                 <  7:211857/149‑1 (MQ=255)
                                                                                                                                                                                                                            cgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAAcaca                                                                                                                                                                 <  5:1361491‑M2/111‑1 (MQ=255)
                                                                                                                                                                                                                                 cAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCt                                                                                                                                                            >  5:235383/1‑149 (MQ=255)
                                                                                                                                                                                                                                      ttgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTg                                                                                                                                                                                                     <  8:1260571‑M2/76‑1 (MQ=255)
                                                                                                                                                                                                                                           ttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAAt                                                                                                                                                  >  7:402241‑M2/24‑149 (MQ=255)
                                                                                                                                                                                                                                           tGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATc                                                                                                                                                                                    <  3:252230/115‑1 (MQ=255)
                                                                                                                                                                                                                                           tGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATc                                                                                                                                                                                    >  1:252230/1‑115 (MQ=255)
                                                                                                                                                                                                                                            gCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAATg                                                                                                                                                 >  5:1565894/1‑149 (MQ=255)
                                                                                                                                                                                                                                             cAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgc                                                                                                                                                <  8:1140615/149‑1 (MQ=255)
                                                                                                                                                                                                                                              tgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGCCAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGAAGCTGGATc             >  1:74082‑M2/21‑279 (MQ=255)
                                                                                                                                                                                                                                                 tccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGaa                                                                                                                                                                     <  6:1202750‑M2/107‑1 (MQ=255)
                                                                                                                                                                                                                                                 tccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGAt                                                                                                                                                              <  6:1608993‑M2/114‑1 (MQ=255)
                                                                                                                                                                                                                                                   cttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTa                                                                                                                                                                                                                              >  2:733336‑M2/16‑66 (MQ=255)
                                                                                                                                                                                                                                                   cttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa                                                                                                                                          >  6:1695566‑M2/16‑149 (MQ=255)
                                                                                                                                                                                                                                                   cntctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa                                                                                                                                          >  7:300588‑M2/16‑149 (MQ=255)
                                                                                                                                                                                                                                                    ttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGc                                                                                                                                                                                                           >  5:1155207‑M2/15‑84 (MQ=255)
                                                                                                                                                                                                                                                    ttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTAc                                                                                                                                                          <  8:1017754‑M2/118‑1 (MQ=255)
                                                                                                                                                                                                                                                       tcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtgt                                                                                                                                      >  5:558833‑M2/12‑149 (MQ=255)
                                                                                                                                                                                                                                                       tcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtgt                                                                                                                                      >  5:622356‑M2/12‑149 (MQ=255)
                                                                                                                                                                                                                                                        cccaaacccaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtgtg                                                                                                                                     >  8:145993‑M2/11‑149 (MQ=255)
                                                                                                                                                                                                                                                          caaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCa                                                                                                                                   >  6:86595‑M2/9‑149 (MQ=255)
                                                                                                                                                                                                                                                               caaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACAAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATg                                                                                                                              >  8:753484‑M2/4‑149 (MQ=255)
                                                                                                                                                                                                                                                                 aCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCg                                                                                                                            >  6:337732‑M2/2‑149 (MQ=255)
                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                              
GAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACG‑CGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGAAGCTGGATCGGCTGGGGCGT  >  NC_000913/1209361‑1209888

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.