BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	131 (0.510)	112 (0.490)	78/258	NT	47.3%	coding (305/630 nt)	stfP	e14 prophage; uncharacterized protein
*	?	NC_000913	= 1209602	133 (0.580)	112 (0.490)	78/258	NT	47.3%	pseudogene (18/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 282 total aligned reads displayed.

TGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGG  >  NC_000913/1209340‑1209834

tGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACCGGTAATGCAGAGccttctcccaaaccaa                                                                                                                                                                                                                          <  1:209559‑M2/279‑17 (MQ=255)

                                       cATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACAAACGTTTAAGAAAATGAAGAAATAACAAGCAAATGGcatca                                                                                                                                                                                   >  1:10177/1‑279 (MQ=255)

                                         tACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatcat                                                                                                                                                                                  >  1:294432/1‑278 (MQ=255)

                                                       tAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGACccttctcccaaaccaaggttttcgagagccgtttgcatagtgccatccgatttgataccgccaaacggatt                                                                                                                                                                   <  1:115476‑M2/279‑72 (MQ=255)

                                                               agCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAATCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAATTGAAGAAATAACAAGCAAATGCCATCATTCCTGATTTTACCAggggg                                                                                                                                                               >  2:519659/1‑275 (MQ=255)

                                                               agCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattctt                                                                                                                                                                <  2:646065‑M2/274‑75 (MQ=255)

                                                                      tGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTAGTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                                                                                                                                        <  2:449283/275‑1 (MQ=255)

                                                                       ttATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                                                                                                       <  2:584448/274‑1 (MQ=255)

                                                                                        gTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAACATGAAGAAATAAAAAGCAAATCGCATCATTCCTGCTTTTACCAGGGGGCTTTAACATGCCTATTGGCTATGTa                                                                                                                                      >  4:125704/1‑275 (MQ=255)

                                                                                         tCATCCCAGCCACGAATAAACTCACAACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCAACGGAACCGGGACACCAACAGGTACTGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGCACTAACAAGAAAATGGCATCATTCCTTCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAc                                                                                                                                     >  2:258085/1‑275 (MQ=255)

                                                                                             cccAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcgg                                                                                                                                                            >  2:205920‑M2/1‑170 (MQ=255)

                                                                                                aGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGCGccttctcccaaaccaaggtttcgaga                                                                                                                                                                                                                <  3:237890‑M2/193‑27 (MQ=255)

                                                                                                aGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggtttcgaga                                                                                                                                                                                                                >  1:237890‑M2/1‑167 (MQ=255)

                                                                                                          aaacataccaattAAATCAGTCCAGTTATTTGTCGGAGAGGCCATGACCAGTTCTGGGTATTATTAAGCAGAAAAACCGTAACAAGTGCATTACAGCCAGCATGTTTGCGGAGAGGCCGAAGGCGACGGACACGGGACACCAACAGGGAATGCAGATCCTTCCCCCAAACCAGCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTGCTGCTTGTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                                                                                                                    <  4:519655/263‑1 (MQ=255)

                                                                                                                accacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacgga                                                                                                                                                                     <  2:341335‑M2/220‑70 (MQ=255)

                                                                                                                  cacGTAAATCAGGCAATTTATTTGTCGGATAAGCTTTTGCCAGTTCCGGGTATTCTTCAGCAGAACAAGCGGCACCATTGCATTTCAGCCAGCCTGTTCAGAAAGTGACTGAAGACCACGGAACCGGGACGCCAACAGGTAATCCagag                                                                                                                                                                                                                                          >  6:1499502/1‑149 (MQ=255)

                                                                                                                  cacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAg                                                                                                                                                                                               >  4:166344/1‑192 (MQ=255)

                                                                                                                  cacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAacac                                                                                                            >  2:356019/1‑275 (MQ=255)

                                                                                                                   ccggaaaaCAGGGAATTTATTTGTNGGATAAGCCTTTTTCAGCTCCGGGTAGTCTTCAGCAGAAAAAGCGGAACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCa                                                                                                                                                                                                                           <  3:138005/159‑1 (MQ=255)

                                                                                                                   acGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGc                                                                                                                                                                                                                                         >  5:1654616‑M2/1‑148 (MQ=255)

                                                                                                                   acGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGc                                                                                                                                                                                                                                         <  6:963706‑M2/149‑2 (MQ=255)

                                                                                                                       aaaTCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttc                                                                                                                                                                                                                                     <  7:1176196‑M2/149‑6 (MQ=255)

                                                                                                                       aaaTCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGGATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttc                                                                                                                                                                                                                                     >  7:680512‑M2/1‑144 (MQ=255)

                                                                                                                          tCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcc                                                                                                                                                                                                                                  <  5:347746‑M2/149‑9 (MQ=255)

                                                                                                                            aGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttccacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacaccagcccccgaagttcggttagtaactggtcttgccacccctcccccccg                                                                                                   <  4:542122‑M2/274‑136 (MQ=255)

                                                                                                                            aGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctccca                                                                                                                                                                                                                                <  7:1525121‑M2/149‑11 (MQ=255)

                                                                                                                               cAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaac                                                                                                                                                                                                                             <  8:36724‑M2/149‑14 (MQ=255)

                                                                                                                                aaTTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacc                                                                                                                                                                                                                            <  8:124635‑M2/149‑15 (MQ=255)

                                                                                                                                 atttatttGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacca                                                                                                                                                                                                                           <  5:878883‑M2/149‑16 (MQ=255)

                                                                                                                                  tttatttGTCGGATAAGCCTTTGCCAGTGCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaa                                                                                                                                                                                                                          >  8:1602422‑M2/1‑133 (MQ=255)

                                                                                                                                         gTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttc                                                                                                                                                                                                                   >  6:236517‑M2/1‑126 (MQ=255)

                                                                                                                                         gTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttc                                                                                                                                                                                                                   >  7:906028‑M2/1‑126 (MQ=255)

                                                                                                                                            ggATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgag                                                                                                                                                                                                                <  7:471697‑M2/149‑27 (MQ=255)

                                                                                                                                             gATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTGCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGaaa                                                                                                                                                                                                               >  6:1403510/1‑149 (MQ=255)

                                                                                                                                               tAAGCCTTTGCCAGTTCCGGGTGTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACGCCAACAGTTAATGCAGAGccttctcccaaaccaaggttttcgcgagc                                                                                                                                                                                                             <  8:1052486‑M2/149‑30 (MQ=255)

                                                                                                                                                 aGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATga                                                                                                                                                                                                           <  5:190556/149‑1 (MQ=255)

                                                                                                                                                  gCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgt                                                                                                                                                                                                          >  6:437890‑M2/1‑117 (MQ=255)

                                                                                                                                                  gCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaa                                                                                                                                                                                                          <  7:1143350/149‑1 (MQ=255)

                                                                                                                                                  gCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaa                                                                                                                                                                                                          <  8:486132/149‑1 (MQ=255)

                                                                                                                                                    cTTTGCCAGTTCCGGGTATTCTTCAGCAGAAACAGCGGCACCATTGCATTTCAGCCAGCCTCTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGCTAATGCACAGccttctcccaaaccaaggttttcgagagccgttt                                                                                                                                                                                                        >  7:1052486‑M2/1‑115 (MQ=255)

                                                                                                                                                     tttGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttg                                                                                                                                                                                                       <  5:804774‑M2/149‑36 (MQ=255)

                                                                                                                                                        gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgt                                                                                                                                                                                                          <  4:699140‑M2/143‑33 (MQ=255)

                                                                                                                                                          cAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgttt                                                                                                                                                                                                        <  8:416155‑M2/143‑35 (MQ=255)

                                                                                                                                                           aGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagt                                                                                                                                                                                                 >  6:131429‑M2/1‑108 (MQ=255)

                                                                                                                                                           aGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACa                                                                                                                                                                                                 <  6:1081961/149‑1 (MQ=255)

                                                                                                                                                           aGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCt                                                                                                                                           <  2:124121/203‑1 (MQ=255)

                                                                                                                                                                  ggTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatcc                                                                                                                                                                                          <  8:816783‑M2/149‑49 (MQ=255)

                                                                                                                                                                      ttcgtcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGaa                                                        <  2:334469/275‑1 (MQ=255)

                                                                                                                                                                       tcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgattt                                                                                                                                                                                     >  7:36724‑M2/1‑96 (MQ=255)

                                                                                                                                                                       tattcagAAGAAAAAGCGGCACGTTTGCATGTACGCAAGCCTGTTGGCCGAGTTGCTGAAGGCGACGGAACCGGAGTACCAACAGGTAATGGAGAGccttctcccaaaccaagggtttcgagggacgtttgcacagggccatccgatttgatatcgccaaacggattcttgcggcttagccgcagcgcgcgaagtgcggtaagtaactggtcgtgccgccgcttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgca                                                        >  4:226668‑M2/3‑96 (MQ=255)

                                                                                                                                                                        cttcATCAAAAAAAGCGGCACCATTGCATTTCTTGCAGCCGGTTGGCGTGGTGGCTTATGGCCACGGAACCGTGACACCAACAAGTAATGCAGAGCCTTCTCCCAACCCAACGTTGATGAAAATGAAGAAATAACAAGCAAATGGCATCAGTCCTGCTTGTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACGGATCTACAACGGAATGCGCTGAACTGTGCAAGATGCGAGCTGATTTTTGAAg                                                       <  4:334730/274‑1 (MQ=255)

                                                                                                                                                                         ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGc                                                                                                                                                                                                                                         <  6:121183‑M2/95‑2 (MQ=255)

                                                                                                                                                                         ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatca                                                                                                                                                                                   >  6:1127253/1‑149 (MQ=255)

                                                                                                                                                                                 aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctc                                                                                                       <  2:163018‑M2/217‑132 (MQ=255)

                                                                                                                                                                                     aGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCGCGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTa                                                                                                                                                                       >  6:508411/1‑149 (MQ=255)

                                                                                                                                                                                          cACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCATCGTTTATGACAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg                                                                                                                                                                  <  5:1211759/149‑1 (MQ=255)

                                                                                                                                                                                            ccATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattctt                                                                                                                                                                >  8:1332780‑M2/1‑75 (MQ=255)

                                                                                                                                                                                             cATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttg                                                                                                                                                               >  5:708922‑M2/1‑74 (MQ=255)

                                                                                                                                                                                             cATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATg                                                                                                                                                                                         <  7:779243/123‑1 (MQ=255)

                                                                                                                                                                                               ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcg                                                                                                                                                             <  5:1081065‑M2/149‑78 (MQ=255)

                                                                                                                                                                                                    tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggctta                                                                                                                                                        >  7:1604228‑M2/1‑67 (MQ=255)

                                                                                                                                                                                                    tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggctta                                                                                                                                                        <  5:1025043‑M2/149‑83 (MQ=255)

                                                                                                                                                                                                    tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                                                                                                                                        >  6:809404/1‑149 (MQ=255)

                                                                                                                                                                                                    tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                                                                                                                                        >  5:1140578/1‑149 (MQ=255)

                                                                                                                                                                                                     ttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                                                                                                       <  7:562109/149‑1 (MQ=255)

                                                                                                                                                                                                     ttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                                                                                                       <  6:985726/149‑1 (MQ=255)

                                                                                                                                                                                                      tCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                                                                                                                                      <  7:1396023/149‑1 (MQ=255)

                                                                                                                                                                                                        agccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacag                                                                                                                                                    >  5:1270363‑M2/1‑63 (MQ=255)

                                                                                                                                                                                                          ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagtcgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagca                                                                                                                                                  >  7:816783‑M2/1‑61 (MQ=255)

                                                                                                                                                                                                             gccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggat                                                                                       >  2:685748‑M2/1‑58 (MQ=255)

                                                                                                                                                                                                              ccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggattcctccaccacgcttccaagttcctcctgcaacatgtcaaagtagtcatcatcccgatcggtgccaggcc                 <  4:346724‑M2/274‑218 (MQ=255)

                                                                                                                                                                                                               cTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAAc                                                                                                                                                                                                  >  5:719381/1‑96 (MQ=255)

                                                                                                                                                                                                               cTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAAc                                                                                                                                                                                                  <  6:719381/96‑1 (MQ=255)

                                                                                                                                                                                                                tGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgc                                                                                                                                            <  5:39316‑M2/149‑95 (MQ=255)

                                                                                                                                                                                                                 gTTGGCGGAGTGGCTGAAGGCCACGGAACCTGGACACCAACATGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTGTACCAGGGGGATTTAACATGCTTATTGGCt                                                                                                                                           <  7:310877/149‑1 (MQ=255)

                                                                                                                                                                                                                     gCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGt                                                                                                                                       <  8:647266/149‑1 (MQ=255)

                                                                                                                                                                                                                         aGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgc                                                                                                                                   <  5:505106/149‑1 (MQ=255)

                                                                                                                                                                                                                         aGTGGCTGAAGGCCACGGAACCGGGACACAAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgc                                                                                                                                   <  6:1644542/149‑1 (MQ=255)

                                                                                                                                                                                                                          gTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggt                                                                                                                                  >  7:124635‑M2/1‑45 (MQ=255)

                                                                                                                                                                                                                          gTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggt                                                                                                                                  >  5:580086‑M2/1‑45 (MQ=255)

                                                                                                                                                                                                                           tGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAGAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGGATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGAGAGCTGATTTTTGAAGAAAAGATAAGCGGCACAAAGTCCGAAAGGc                         >  2:129216/1‑253 (MQ=255)

                                                                                                                                                                                                                            ggCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaa                                                                                                                                >  6:545504‑M2/1‑43 (MQ=255)

                                                                                                                                                                                                                               tGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATca                                                                                                                             >  5:915909/1‑149 (MQ=255)

                                                                                                                                                                                                                                   ggCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACg                                                                                                >  2:626206/1‑174 (MQ=255)

                                                                                                                                                                                                                                    gCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttccggcttaacagcagcgcgcgaagtgcggtaagtaactgg                                                                                                                        <  6:580258‑M2/149‑115 (MQ=255)

                                                                                                                                                                                                                                    gCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                                                                                                       >  3:57853/1‑118 (MQ=255)

                                                                                                                                                                                                                                       aCGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTTGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAAt                                                                                            <  4:626202/174‑1 (MQ=255)

                                                                                                                                                                                                                                         ggAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAcc                                                                                                                   <  5:97468/149‑1 (MQ=255)

                                                                                                                                                                                                                                           aaCCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgcc                                                                                                                 <  8:542477‑M2/149‑122 (MQ=255)

                                                                                                                                                                                                                                                ggACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccc                                                                                                            <  8:1126534‑M2/149‑127 (MQ=255)

                                                                                                                                                                                                                                                    acCAACAGGTAATGCAGAGccttctcccaaaccaagtttttcgcgagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcagcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttct                                                                                                        <  6:683877‑M2/149‑131 (MQ=255)

                                                                                                                                                                                                                                                      cAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttg                                                                                                                                                               <  5:1598818‑M2/92‑76 (MQ=255)

                                                                                                                                                                                                                                                      cAACAGGTAATGCAGAGCCTTCACCCAAACCAACGTTTATGAAAGTGAAGAAATAACAAGCAAATGGCATTATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCt                                                                                                      >  8:767886/1‑149 (MQ=255)

                                                                                                                                                                                                                                                       aaCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctcca                                                                                                     <  6:1574739‑M2/149‑134 (MQ=255)

                                                                                                                                                                                                                                                       aaCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctcca                                                                                                     <  7:888016‑M2/149‑134 (MQ=255)

                                                                                                                                                                                                                                                        aCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccag                                                                                                    >  8:11556‑M2/1‑15 (MQ=255)

                                                                                                                                                                                                                                                            gTAATGCAGAGccttctcccaaaccaaggtttgcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccctactccaggctg                                                                                                <  8:1445459‑M2/149‑139 (MQ=255)

                                                                                                                                                                                                                                                              aaTGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggc                                                                                              >  7:1126534‑M2/1‑9 (MQ=255)

                                                                                                                                                                                                                                                                     agccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggat                                                                                       >  5:1361138‑M2/1‑2 (MQ=255)

                                                                                                                                                                                                                                                                      gCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTg                                                                                      >  8:1660733/1‑149 (MQ=255)

TGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGG  >  NC_000913/1209340‑1209834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.