Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 2,462,678 | T→A | 5.2% | intergenic (+32/‑334) | fadL → / → yfdF | long‑chain fatty acid outer membrane transporter/uncharacterized protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,462,678 | 0 | T | A | 5.2% | 974.3 / 30.3 | 270 | intergenic (+32/‑334) | fadL/yfdF | long‑chain fatty acid outer membrane transporter/uncharacterized protein |
Reads supporting (aligned to +/- strand): ref base T (121/135); new base A (7/7); total (128/142) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.38e-02 |
Only 100 of 273 total aligned reads displayed.
CTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCGGACCAGGACCGTTTCTGGCTGAGTGCAGGTACGACTTACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTT > NC_000913/2462418‑2462946 | gCACAGAATCGTTCTATCTCCATTCCGGACCAGGACCGTTTCTGGCTGAGTGCAGGTACGACTTACGCATTTAATAAAGAAGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGaaa > 2:217273/1‑273 (MQ=255) ttCTATCTCCATTCCGGACCAGGACCGTTTCTGGCTGAGTGCAGGTACGACTTACGCATTTAATAAAGATGCTTCGGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGACGGCCCATACCCGTTCGAGTCTGGAGGTAAAGCCTGGATGTTCGGTACTAACTTTAACTCCGCGTTCTGAAAACGCGTTCGCCTGGAC‑AACGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCCCACGTAGAG‑TACTCAt > 4:355048/1‑275 (MQ=255) ttCTATCTCCATTCCGGACCAGGACCGTTTCTGGCTGAGTGCAGGTACGACTTACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCAt > 2:557093/1‑275 (MQ=255) ttCCGGACCAGGACCGTTTCTGGCTGAGTGCAGGTACGCCTTACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCCCGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGCAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCTTTCTTATAACGCGTTCGCCTTGAT‑AACGTCACCTGCCTA‑GCCGGTGACTTTAACTCCCCCACTTCACCGACAGTAGTT‑TCCTAATAGCTTACCTCCTGac > 1:200914/1‑278 (MQ=255) tacgaccaaGGAACGTTTCTGGCTGAGTGCAGGTACGGATTACGCATTTAATAAAAATGCTTCAGTGGACGTTGGTGTTTCTTGTATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTAcctcct < 4:169794/267‑1 (MQ=255) tttCTGGCTGAGTGCAGGTACGACTTACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTCACTTTAACTACGCGTTCTGATAACGCGTTCCCCTTGAT‑AAAGTAACCTGCCTA‑GCAGGTCACTTTAAATCCCACACTTCACCGAAAGTAGTGCACCTCTGTGCTCACC‑CTTGAGTTTTGCAAACAg > 4:626930/1‑275 (MQ=255) ttACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCa < 2:355052/274‑1 (MQ=255) cTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTACAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCcaca > 4:48891/1‑275 (MQ=255) aGTCGACGTTGGTGTTTCTTATATGCACGGTAAGGGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACa < 2:626934/275‑1 (MQ=255) aCGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAagtagt > 3:162745/1‑187 (MQ=255) ttGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCa < 5:1592101/149‑1 (MQ=255) ttGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCCGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCa < 6:175216/149‑1 (MQ=255) tgtTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTg > 5:900601/1‑149 (MQ=255) gtTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGa < 8:1430337/149‑1 (MQ=255) tttCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGAc > 6:408660/1‑149 (MQ=255) tCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACtt < 7:988985/149‑1 (MQ=255) tataTGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTaa < 5:1186239/149‑1 (MQ=255) tatGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGt > 2:505093/1‑195 (MQ=255) gCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTccc > 8:652144/1‑149 (MQ=255) aCGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTc < 2:261821/172‑1 (MQ=255) cGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAACCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTTCCCCa < 5:491455/149‑1 (MQ=255) tCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATa < 7:922340/124‑1 (MQ=255) gagCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCTAT‑GCAGGTGa > 6:260055/1‑129 (MQ=255) gagCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCTAT‑GCAGGTGa < 5:260055/129‑1 (MQ=255) gagCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCAc < 6:739507/149‑1 (MQ=255) aaaaTTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGATAAAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCg > 2:305919/1‑275 (MQ=255) aaaTTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAagta > 7:1587660/1‑149 (MQ=255) aaTTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGa < 8:303232/143‑1 (MQ=255) aaTTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGa > 7:303232/1‑143 (MQ=255) aTTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAagtagt < 5:312559/149‑1 (MQ=255) tAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGAATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAgtg‑t > 6:1475811/1‑149 (MQ=255) aCGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑Tcc < 5:1699712/149‑1 (MQ=255) aCGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑Tcc > 7:475916/1‑149 (MQ=255) gAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTc < 7:597158/122‑1 (MQ=255) aaGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCa > 7:1677940/1‑149 (MQ=255) gCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTg > 5:1492188/1‑149 (MQ=255) ccATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATT‑GCAGGTGa < 7:1557064/107‑1 (MQ=255) ccATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGa > 8:1557064/1‑107 (MQ=255) ccATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACttt < 8:24907/111‑1 (MQ=255) ccATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACttt > 7:24907/1‑111 (MQ=255) ccATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCt < 6:1554870/149‑1 (MQ=255) cATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCtt > 8:1023261/1‑149 (MQ=255) cATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCtt < 6:788164/149‑1 (MQ=255) cATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCtt < 7:550583/149‑1 (MQ=255) tACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTAc < 8:812501/149‑1 (MQ=255) aCCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTAcc > 5:801626/1‑149 (MQ=255) ccAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCAc < 6:993824/122‑1 (MQ=255) ccAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGaaa > 7:1149276/1‑127 (MQ=255) ccAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGaaa < 8:1149276/127‑1 (MQ=255) cAGTTCGAGTCTGAAGGTAAAGCCTTGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCTTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTAcctc < 8:182676/149‑1 (MQ=255) gTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACNGAAAGTANTG‑TNCTCATTNCTTACCTCCTGAGTTTTGCAAAc > 3:39859/1‑162 (MQ=255) gTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAAc < 1:39859/162‑1 (MQ=255) gTTCGAGTCGTAAGGGAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGGTCGCCTGGATAAAAGTCACCTTCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCGTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAGCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCGCAAAGAGTTTACtttt < 4:305915/275‑1 (MQ=255) tCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGACAGGCATATTTTCAGGCg > 1:289103/1‑240 (MQ=255) gTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACa > 1:106792/1‑206 (MQ=255) tCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGC‑TATGCAGGTGACt < 8:1202406/94‑1 (MQ=39) tGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGa > 8:1287707/1‑142 (MQ=255) tGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGc > 8:1392295/1‑149 (MQ=255) tGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCGGa < 7:1287707/142‑1 (MQ=255) aGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAagta > 6:1126409/1‑115 (MQ=255) aGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCaaa > 6:560817/1‑149 (MQ=255) tAAAGCCTGGCGGTTCGGTACTAACTTTAAGAGAGGGGTCTGATAACGCGTTCGCCGTGTT‑AAAGTCACCTGCATA‑GCAGGGGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATa < 4:58233/275‑1 (MQ=255) aaaGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCTAT‑GCAGGTGACtt > 6:1222067/1‑86 (MQ=38) cTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGtt < 8:612909/149‑1 (MQ=255) gCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAAc > 5:1248994/1‑82 (MQ=255) tCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCtt < 7:1518004/149‑1 (MQ=255) gTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACt < 2:16324/83‑1 (MQ=255) cTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCtt > 7:345651/1‑149 (MQ=255) tAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCttt < 8:475916/149‑1 (MQ=255) aCTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCAt > 4:206277/1‑99 (MQ=255) aCTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGc > 1:151640/1‑127 (MQ=255) tttAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGt < 8:592128/57‑1 (MQ=255) aaCTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCa > 4:722877/1‑149 (MQ=255) cTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAAt < 8:1587660/149‑1 (MQ=255) aCGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATaa < 7:1392295/149‑1 (MQ=255) aCGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATaa < 2:722882/149‑1 (MQ=255) aCGCGTTATCAGGACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATaa > 6:656812/1‑149 (MQ=255) aCGCGTTATCAGAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATaa > 5:141819/1‑149 (MQ=255) gcgTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGc > 6:458972/1‑149 (MQ=255) tGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATc > 5:1403127/1‑149 (MQ=255) tGATAACGCGTTCGCCCGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATc < 7:1437613/149‑1 (MQ=255) gATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATcc < 5:746944/149‑1 (MQ=255) tAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCcac > 5:504809/1‑149 (MQ=255) aaCTCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCcaca < 6:1249968/149‑1 (MQ=255) gcgTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGAc > 7:767491/1‑149 (MQ=255) cTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGa > 7:673831/1‑149 (MQ=255) gAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAgg > 5:420571/1‑149 (MQ=255) t‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCttt < 5:841569/110‑1 (MQ=255) t‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCttt > 6:841569/1‑110 (MQ=255) aaaGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGaa < 6:900601/149‑1 (MQ=255) aGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAagta > 3:13933/1‑49 (MQ=255) aGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCGAAGAGTTTACTTTTCTGCa > 2:33168/1‑201 (MQ=255) aGTCACCTGC‑TATGCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGtt > 7:115126/1‑92 (MQ=39) gTCACCTGC‑TATGCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGtt < 8:862285/75‑1 (MQ=38) tCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGc > 8:1512235/1‑149 (MQ=255) tCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGc < 8:32088/149‑1 (MQ=255) aCCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGa < 7:851728/128‑1 (MQ=255) aCCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCGAAGAGTTTACTTTTCTGCATTTc < 4:33168/201‑1 (MQ=255) cATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATAtttt < 7:1372569/149‑1 (MQ=255) aTA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTc < 7:529220/149‑1 (MQ=255) | CTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCGGACCAGGACCGTTTCTGGCTGAGTGCAGGTACGACTTACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTT > NC_000913/2462418‑2462946 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |