Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 2,900,322 | C→T | 5.6% | intergenic (‑49/‑270) | ygcW ← / → yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,900,322 | 0 | C | T | 5.6% | 700.5 / 21.4 | 214 | intergenic (‑49/‑270) | ygcW/yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein |
Reads supporting (aligned to +/- strand): ref base C (91/110); new base T (6/6); total (98/116) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.74e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.21e-01 |
Only 100 of 220 total aligned reads displayed.
GATACCCACCTGCATGAAGTCCACCTCAACACCCTGTTTTTCAATCATTTCCTTTGTTTCGCCGTTATCTTTGACGAAACTAGGAATAAAGATATTTGCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTGCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAATCCACCTGAAAGGGCGGCTTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGA > NC_000913/2900049‑2900584 | gATACCCACCTGCATGAAGTCCACCTCAACACCCTGTTTTTCAATCATTTCCTTTGTTTCGCCGTTATCTTTGACGAAACTAGGAATAAAGATATTTTCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCGGGGAGAAAAACTCATTTGAGAACGCATTGAGATATTCCATTGCCATAGTTAGCTCCAATTCCCGTAAGCCCAAACAAACGAAAGGTAACTTccccc > 4:113663/1‑275 (MQ=255) cACCTGAATGAAGTCCACCTCAACAACCTGGTTTTCAATCATTTCCTTTGTTTCTGCGTTATCTTTGACGAAAATAGGAATAAAGATATTTGCGCC‑AGCTTTGGCCAACGCAATGGCAAATGCCTGGCCTAAACCGCCATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCgaga < 4:200257/275‑1 (MQ=255) cTGCATGAAGTCCACCTCAACACCCTGTTTTTCAATCATTTCCTTTGTTTCGCCGTTATCTTTGACGAAACTAGGAATAAAGATATTTGCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAANNNAAAAAAAGACAACTTCCAACACAAGA‑GGGactt > 3:273361/1‑276 (MQ=255) tGAAGTCCACCTCAACACCCTGTTTTTCAATCATTTCCTTTGTTTCGCCGTTATCTTTGACGAAACTAGGAATAAAGATATTTGCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGt < 2:27529/274‑1 (MQ=255) tCCACCTCAACACCCTGTTTTTCAATCATTTCCTTTGTTTCGCCGTTATCTTTGACGAAACTAGGAATAAAGATATTTGCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCtt > 2:390394/1‑275 (MQ=255) aCCTCAACACCCTGTTTTTCAATCATTTCCTTTGTTTCGCCGTTATCTTTGACGAAACTAGGAATAAAGATATTTGCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTtct > 2:35712/1‑275 (MQ=255) aaCACCCTGTTTTTCAATCATTTCCTTTGTTTCGCCGTTATCTTTGACGAAACTAGGAATAAAGATATTTGCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTa > 2:417756/1‑275 (MQ=255) tGTTTTTCAATCATTTCCTTTGTTTCGCCGTTATCTTTGACGAAACTAGGAATAAAGATATTTGCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCTTGGCCTAAACCGCTATTCCCACCGGTAAAAATTGCGGTTTTACCTTTCAGGGTGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTATCTCCCATTTCCGATAAGCAAAAAAAACGAAATGTAACTTCCCCCGCTACG‑GGTAACATACCTTTCTCATTaaccttgg > 4:69520/1‑268 (MQ=255) tttttCAATCATTTCCTTTGTTTCGCCGTTATCTTTGACGAAACTAGGAATAAAGATATTTGCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTg > 1:219866/1‑279 (MQ=255) tCATTTCCTTTGTTTCGCCGTTATCTTTGACGAAACTAGTAATAAAGATATTTGTCCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTCAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCCGGGAGCAAAAATCCATTGAGAACGTATTGAGGGTTTCGATTGACATAGTTACCTCCATTTTCCTTAATGCAAAAATAAAGCAAGGTAACTTCCCCTG‑GATATGGGAAGTTACCTTTACCATTTTCCCTGGAAACTGgagt > 4:325177/1‑274 (MQ=255) tCCTTTGTTTCGCCGTTATCTTTGACGAAACTAGGAATAAAGATATTTTCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTACAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTAGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTACCTCAGATAACGGGAGATAAtt > 4:486670/1‑275 (MQ=255) ttccTTTGACGAAACAAGGAATAAAGATATTTGCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCAt < 4:555778/272‑1 (MQ=255) aaCTAGGAATAAAGATATTTGCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACCTAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAATTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAAATAATTTTTAGCATAAGGGCATAACTGCTAAtgt > 2:241118/1‑275 (MQ=255) taaaataatTTCCGCC‑AGCTTTGGGCAACCCCATTGCAACATCCTGGCCTAAACCCGAATTCCCACCGGTAAAAATTGCGGTTTTACCTTTCAGCGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGGCATAGTTAGCTCCAATTTCCGTAAGGCCAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAAt < 4:35712/268‑1 (MQ=255) aaaaaaattGCGCCAAGCTTTGGCC‑ACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATca < 2:489046/268‑1 (MQ=255) tttGCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAgtgt > 4:385160/1‑275 (MQ=255) tttGCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAgtg > 2:44817/1‑274 (MQ=255) cTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCcgcg > 7:875892/1‑149 (MQ=255) ccTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGaga‑g < 5:766007/149‑1 (MQ=255) aatAAACTGCTATTCCAATCGGTAAAAAAGTGGNTTTTAACTTTCAAGAAGAAAAAATCNATTTAGAATGCATTGAGATGTGAGAATGAAATAGTTAGATCCAATTTCTGGAAGGAAAAAAAAAAGAAAGGTAACTGCCCNCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGAt < 3:155479/277‑1 (MQ=255) tAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑ggg > 5:225377/1‑149 (MQ=255) aaCCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGaa < 8:494013/149‑1 (MQ=255) aaCCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGaa < 8:923282/149‑1 (MQ=255) aaCCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATAtt > 2:195227/1‑238 (MQ=255) aaCCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTAct > 1:273431/1‑279 (MQ=255) cTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTAc > 6:90699/1‑149 (MQ=255) ccACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAGAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTtct > 8:1372218/1‑149 (MQ=255) ccACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTtct > 7:1146796/1‑149 (MQ=255) ccACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTtct > 6:269061/1‑149 (MQ=255) ccACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTtct < 8:289264/149‑1 (MQ=255) cACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTtctc > 7:1198345/1‑149 (MQ=255) aaCAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTAtct < 7:607512/149‑1 (MQ=255) aCAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTAtctc < 8:418588/149‑1 (MQ=255) aaTTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTg > 7:1439845/1‑149 (MQ=255) aTTGCGGATTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGaa > 8:382214/1‑126 (MQ=255) ttACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATGGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATcaca < 3:233559/196‑1 (MQ=255) tttCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAAt > 7:903193/1‑149 (MQ=255) tCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAAttt < 8:1198345/149‑1 (MQ=255) cAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAAtttt < 6:1519044/149‑1 (MQ=255) aGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAAttttt < 8:17766/149‑1 (MQ=255) gggAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTa < 5:827425/149‑1 (MQ=255) gggAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTa < 5:909424/149‑1 (MQ=255) ggAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCt < 6:366574/113‑1 (MQ=255) ggAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGt > 5:1193914/1‑130 (MQ=255) ggAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAg < 6:688628/149‑1 (MQ=255) ggAGAAAAAATCCATTGAGAAAGCATTGAGAGATTCGATTGACATAGTTAGCTCCAAGTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTGCTTTCCATGTTATTTattatt < 2:113664/274‑1 (MQ=255) aaaaaaTCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATa > 7:699018/1‑149 (MQ=255) aaaaTCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTAc < 4:90388/105‑1 (MQ=255) aTCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGc > 6:182516/1‑149 (MQ=255) aTTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATaa > 7:1595703/1‑149 (MQ=255) aTTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATaa < 8:1439845/149‑1 (MQ=255) ttGAGAACGCATTGAAAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAAc < 8:15776/149‑1 (MQ=255) agaACGCATTGAGAGATTCGATTGGCATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGc > 7:1659103/1‑149 (MQ=255) cGCATTGAGAGATTCGTCTGAGAAAGTTATGTCCAATTTCCGAAAGGCAAAAAAAAAGAAAGGTATCTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTATCTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAAt < 8:601805/149‑1 (MQ=255) tGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGAt < 7:316091/149‑1 (MQ=255) gagagaTTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATc < 7:1060887/149‑1 (MQ=255) agagaTTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATcaca < 4:440712/157‑1 (MQ=255) gagaTTCGATTGACATATTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACt < 7:1418172/105‑1 (MQ=255) aTTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCAt < 1:246338/120‑1 (MQ=255) aTTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAAt < 5:1502756/149‑1 (MQ=255) gATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTGCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAg < 2:208122/263‑1 (MQ=255) gATTGACATAGTTAGCTCCAATTTCCGCAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATcaca < 5:1389830/149‑1 (MQ=255) ttGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAgt > 8:749159/1‑149 (MQ=255) tGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAgg > 2:571731/1‑117 (MQ=255) gACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCCCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAgtgt < 7:39876/149‑1 (MQ=255) aCATAGTTAGCCCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGtgtg > 6:1622436/1‑149 (MQ=255) aCATACTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCAt < 7:544710/119‑1 (MQ=255) cATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGa > 8:1004508/1‑149 (MQ=255) aGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGt < 6:578920/149‑1 (MQ=255) gCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTa < 8:1311310/149‑1 (MQ=255) tCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTAtt > 8:538211/1‑149 (MQ=255) cAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAAt > 5:1090801/1‑116 (MQ=255) cAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGt < 7:228661/149‑1 (MQ=255) aTTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTa > 4:224426/1‑92 (MQ=255) aTTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATcac > 4:613653/1‑128 (MQ=255) ttCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCaaa < 6:432860/149‑1 (MQ=255) tCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAaat > 7:1643388/1‑149 (MQ=255) gTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAAATGCTAATTTGATCGTAATCACCGTGTGATATTTGTATTGTCAaattat > 5:1296189/1‑149 (MQ=255) ggCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTAtt > 6:530409/1‑135 (MQ=255) ggCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTAtt < 5:530409/135‑1 (MQ=255) aaaaaaaaaGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTaaaa > 8:802949/1‑149 (MQ=255) aaaaaaaGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAg < 5:338309/149‑1 (MQ=255) aaaaaGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCa < 7:675491/149‑1 (MQ=255) aaaaaGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCa < 6:809118/149‑1 (MQ=255) agaaagGTAACTTCCCTCTCGCGG‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAg > 7:487959/1‑149 (MQ=39) agaaagGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAg > 7:733441/1‑149 (MQ=255) agaaagGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTcac > 2:751191/1‑164 (MQ=255) ataagTAACTTCCCCCGCGAGA‑TGTAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAAGGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTGCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAATCCACCTGAAAGGGCGGCTTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGa < 1:168423/273‑1 (MQ=255) agGTAACTTCCCTCTCGCGG‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAAtt < 6:1456896/131‑1 (MQ=255) agGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTg < 6:111897/149‑1 (MQ=255) tAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGAtt > 5:1698239/1‑149 (MQ=255) aCTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTAc > 5:27055/1‑149 (MQ=255) cTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGGTATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTAct < 5:386866/149‑1 (MQ=255) ttCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGc < 5:803725/139‑1 (MQ=255) ttCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTActc < 6:241589/149‑1 (MQ=255) ttCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTActc > 5:374146/1‑149 (MQ=255) ttCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTT‑AAAAGCAGAAGCGTGATTActct > 5:195968/1‑149 (MQ=255) tCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTActct < 6:1053951/149‑1 (MQ=255) tCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTActct < 5:1599945/149‑1 (MQ=255) cccGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTcac > 6:602555/1‑149 (MQ=255) | GATACCCACCTGCATGAAGTCCACCTCAACACCCTGTTTTTCAATCATTTCCTTTGTTTCGCCGTTATCTTTGACGAAACTAGGAATAAAGATATTTGCGCC‑AGCTTTGGCCAACGCCATGGCAAATGCCTGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGA‑GGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACACCTCTGCTTTCCATGTTATTTATTATTTCAATTACTAGAGACCTGAGAAAAGTAATCCACCTGAAAGGGCGGCTTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGA > NC_000913/2900049‑2900584 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |