Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 111,013 | G→A | 9.4% | intergenic (+29/‑31) | secA → / → mutT | preprotein translocase subunit, ATPase/dGTP‑preferring nucleoside triphosphate pyrophosphohydrolase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 111,013 | 0 | G | A | 9.4% | 750.8 / 49.1 | 250 | intergenic (+29/‑31) | secA/mutT | preprotein translocase subunit, ATPase/dGTP‑preferring nucleoside triphosphate pyrophosphohydrolase |
Reads supporting (aligned to +/- strand): ref base G (114/111); new base A (6/17); total (122/128) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.87e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.98e-03 |
Only 100 of 258 total aligned reads displayed.
ATCAGTACGCTGAGCAAAGTTCAGGTACGTATGCCTGAAGAGGTTGAGGAGCTGGAACAACAGCGTCGTATGGAAGCCGAGCGTTTAGCG‑CAAATGCAGCAGCTTAGCCATCAGGATGACGACTCTGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTCCCGGCGGTAAAATTGAAATGGGTGAAACGCCGGAACAGGCGGTGGTGCGTGAACTTCAGGAAGAAGTCGGGATTACCCCCCAACATTTTTCGCTATTTGAAAAACTGGAATATGAATTCCCGGACAGGCATAT > NC_000913/110745‑111282 | gtaagatgggCAAAATTCAAGTACGTATGCCTGAAGAGGTTGAGGAGCTGGAACAACAGCGTCGTTTGGAAGCCGAGCGTTTAGCG‑CAAATGCAGCAGCTTAGCCATCAGGATGACGACTCTGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGcc < 2:315682/266‑1 (MQ=255) gCAAAGTGCAGGTACGGTAGCCTGAAGAGGTAGAGGGGCGGGAAAAACGAGGTCGTAGGGAAGCGGGGCGTTTACCG‑CAAATGCAGCAGCTTAGCCATCAGGATGACGACTCTGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTtat < 4:515294/274‑1 (MQ=255) gTACGGATGCCTGAAGAGGTTGGGGAGCGGGAACAACAGCGTCGTATGGAAGCCGAGCGTTTAGCG‑CAAATGCAGGAGCTTAGCCATCAGGAGGACGACTCTGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGAc < 4:489779/274‑1 (MQ=255) tATGCCTGAGGAGCTTGAGGCGCTGGAACAACAGCATCGTATGGAAGCCGAGCGTTTAGCG‑CAAATACCGCAGCTTAGCAATCATGATGCCGACTCTCCAGCCGCAGCTCCACTGCCTGCGCAAACCGGAGAGCGCTACGTAGGGAGTAACGATCCGTGCCCGTGCCGTTCGTGTCAAAACTACTAACAGTGACCGTGGCCCCC‑‑CATTGAAAAGCTAACATTTGAAATAAAAGCCTCAGGAGTATACGCCTTTTTTTTAGGTTGTAGACACTGac > 4:101791/1‑274 (MQ=255) gTTGAGGAGCTGGAACAACAGCGTCGTATGGAAGCCGAGCGTTTAGCG‑CAAATGCAGCAGCTTAGCCATCAGGATGACGACTCTGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAAtt > 2:383592/1‑275 (MQ=255) ggagCTGGAACAACAGCGTCGTATGGAAGCCGAGCTTTTAGCG‑CAAATGCAGCAGCTTAGCCATCAGGATTACGACTCTGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCggt < 2:329993/275‑1 (MQ=255) gagCTGGAACAACAGCGCCGTATGGAAGCCGAGCGTTTAGCG‑CAAATGCAGCAGCTTAGCCATCAGGATGACGACTCTGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCggt < 2:476679/274‑1 (MQ=255) tGGAACAACAGCGTCGTATGGAAGCCGAGCGTTTAGCG‑CAAATGCAGCAGCTTAGCCATCAGGATGACGACTCTGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGCTTCTGCGCCTTTTTTAGAGGGTTAAGACAATGAAAAAGCTGCAAATTg > 4:475722/1‑266 (MQ=255) gtagggttAGCGCCAAATTCGGCGGCTTAGCCAGCAGGTTGACGACTCGGCAGCCGCAGCTGGACTGGCGGGGCAAACCGGAGAGCGCAAATTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCATTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGaaa < 4:12794/268‑1 (MQ=255) agcagaaccATCAGGAAAGCGACTCGTCGGCGNNNGCTGCGAGGGGGGGACAAAACGGAGGGCGCAAAGAAAGACGTAACTATCCTTGCCCGGGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATg < 3:272157/271‑1 (MQ=255) tGACGACTCTGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTtat < 2:261664/171‑1 (MQ=255) cgacTCTGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑CAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGAAAATGAAAAAGCTGCAAAGTGCGGTAGGTATTATTCGCAACGCACACAATGAACTCTTTATACCGCCTCGCGCACCCGATACGCACACGGCCaaaca > 4:459661/1‑272 (MQ=255) ctctGCAGCCTCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGT‑AAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑ACAAGCTAACTGTTGAAGTAAAAGGCGCAGAAtc < 8:1076061/149‑2 (MQ=255) cagtGCAGCTGCGGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGAt > 5:530581/4‑149 (MQ=255) tctGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGAtt > 6:898071/1‑149 (MQ=255) tGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAGAGGCGCAGGATTCTGCGCCttt > 4:705704/1‑157 (MQ=255) aGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTgcg > 6:477400/1‑149 (MQ=255) gCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAGAGGCGCAGGATTCTGCGCCTTTTTta < 2:705709/157‑1 (MQ=255) ccGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGAATCCTGCGcc < 6:1229748/149‑1 (MQ=255) ccGCAGATGCAGTGGCGGCGTAAAACGGAGAGCGCAAAGTAGGACGTAACGCTCCTTGCCCGAGCGGTTATGGTAAAAAATAGAAGCAGTG‑CCCTGGCCGCCTGCAAT‑AAAAGCTAAATGTTGAAGTAAAAGGCGCAGGATTCTGCGcc > 8:809372/1‑149 (MQ=255) cGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGAATCCTGCGCCt < 8:1223472/149‑1 (MQ=255) gCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGAATCCTGCGCCtt < 6:19842/149‑1 (MQ=255) gCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGAATCCTGCGCCtt < 8:1327730/149‑1 (MQ=255) aGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTCCcgg < 2:462704/275‑1 (MQ=255) gCTGCACTGGCGGCGCAAACCGGAGAGCTCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTATGGTAAAAAATACAATCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGAATCCTGCGCCtttta < 7:878384/149‑2 (MQ=255) cgcAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGa < 7:1413765/149‑1 (MQ=255) gcAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGAtt > 1:64401/1‑123 (MQ=255) gcAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGAc < 7:69895/149‑1 (MQ=255) aaaCCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACaa < 5:463859/149‑1 (MQ=255) aaaCCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACaa < 5:128034/149‑1 (MQ=255) aaCCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAAt > 6:1207117/1‑149 (MQ=255) aaCCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAAt < 6:1569152/149‑1 (MQ=255) ggAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGaaa > 8:734789/1‑149 (MQ=255) gcgcAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCt > 7:517317/1‑149 (MQ=255) gcAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGc < 6:582652/149‑1 (MQ=255) gcAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATNNNTATAAcgc > 4:763479/1‑200 (MQ=255) aaaGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCaa > 6:1450849/1‑149 (MQ=255) aaaGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCgcag < 1:227007/207‑1 (MQ=255) aaaGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCgcag > 3:227007/1‑207 (MQ=255) aaaGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTCCCGGCGGTAAAATTGAAATGGGTGAAACGCCGGa < 2:203910/274‑1 (MQ=255) aaaGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGAATCCTGCGCCt < 7:268933/115‑1 (MQ=255) gTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAAtt < 5:567680/149‑1 (MQ=255) ggACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCg < 6:1311907/149‑1 (MQ=255) gACGTAACGATCCTTGCCCGTGCGTTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATGCTGCGCCTTTTTTATAGGTTCAAGACAATGAAAAAGCTGCAAATTGCgg > 7:1056424/1‑149 (MQ=255) tAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCggtagg < 5:16299/149‑1 (MQ=255) cGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCt > 4:779849/1‑95 (MQ=255) cGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTtat > 1:146772/1‑108 (MQ=255) cGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTtat < 3:146772/108‑1 (MQ=255) cGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTCCCGGCGGTAAAATTGAAATGGGTGAAACGCCGGAACAGGCGGTTGTGCg > 2:116518/1‑275 (MQ=255) gATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGtatt > 7:216029/1‑149 (MQ=255) cTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTc < 7:980228/149‑1 (MQ=255) ttGCCCGTGCGGTTCTGGT‑AAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGc > 6:1043993/1‑149 (MQ=255) cccGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCaa < 5:898071/149‑1 (MQ=255) tGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGaa < 3:180264/158‑1 (MQ=255) ggTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAAc > 6:1685638/1‑149 (MQ=255) gTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTtat < 2:774248/91‑1 (MQ=255) gTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACgag < 2:58495/145‑1 (MQ=255) tCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAAt < 6:1627551/149‑1 (MQ=255) gTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGaaa < 7:1638487/149‑1 (MQ=255) tAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAAt < 8:211802/149‑1 (MQ=255) aaaaaTACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCt > 5:300393/1‑149 (MQ=255) tACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATa > 2:187898/1‑183 (MQ=255) aGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAGGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTc < 8:942158/149‑1 (MQ=255) gTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGttt < 5:197197/75‑1 (MQ=255) tGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCgcagc < 6:665884/149‑1 (MQ=255) ggCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCgcagca > 7:752104/1‑149 (MQ=255) gccgccTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACga < 8:1256968/114‑1 (MQ=255) gccgccTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGaaa < 6:711491/125‑1 (MQ=255) ccgccTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGa < 8:1554439/149‑1 (MQ=255) ccgccTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGa < 7:1236104/149‑1 (MQ=255) gccTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCgcagca < 1:252667/145‑1 (MQ=255) tGCAAT‑AAAAGCTAACTTGTGAAATAAAAGGCGAAGGATTCTGCTCCTTTTTTATAGGGTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTCCCGGCGGTAAAATTGAAATGGGTGAAACGCCGGAACAGGCGGTGGTGCGTGAACTTCAGGAAGAAGTCGGGATTACCCCCCAACATTTTTCGCTATTTGAAAAAc < 1:76373/278‑1 (MQ=255) tGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTCCCGGCGGTAAAATTGAAATGGGTGAAACGCCGGAACAGGCGGTGGTGCGTGAACTTCAGGAAGAAGTCGGGATTACCCCCCAACATTTTTCGCTATTTGaaa > 4:361070/1‑275 (MQ=255) cAAT‑AAAAGCTAACTGTTGGAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAAt > 7:683439/1‑118 (MQ=255) aT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCtt < 8:1162203/119‑1 (MQ=255) aT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCtt > 7:1162203/1‑119 (MQ=255) aaaaGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGttt > 6:747619/1‑55 (MQ=255) aaaaGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGttt < 5:747619/55‑1 (MQ=255) aaaGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGc < 7:1258727/149‑1 (MQ=255) cTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATC‑TTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATa < 8:653512/149‑1 (MQ=255) tAAATGTTGAATTAAAAGGAGCAGGATTCTGTGCCTTTTGTTAAGGTTTAAGACAACGAAAAAGCTGCAAAGTGCGGGAGGTATTATTCGAAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGAACATGGCGAATAAACTGGAGTTTCCCGGCGGTAAAATTGAAATGGGTGAAACGCCGGAACAGGCGGTGGTGCGTGAACTTCAGGAAGAAGTCGGGATTACCCCCCAACATTTTTCGCTATTTGAAAAACTGGAATATg < 4:305052/275‑1 (MQ=255) aaCTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTcg < 1:123897/122‑1 (MQ=255) aaCTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATaa > 8:1475116/1‑149 (MQ=255) tGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGa < 5:681480/149‑1 (MQ=255) tGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGa < 5:629280/149‑1 (MQ=255) tGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTCATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGa < 8:1114491/149‑1 (MQ=255) gAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAg > 5:1184936/1‑149 (MQ=255) gAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAg > 6:379390/1‑149 (MQ=255) aGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGtt > 7:779746/1‑149 (MQ=255) gTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTCCCGGCGGTAAAATTGAAATGGGTGAAACGCCGGAACAGGCGGTGGTGCGTGAACTTCAGGAAGAAGTCGGGATTACCCCCCAACATTTTTCGCTATTTGAAAAACTGGAATATGAATTCCCGGAc < 2:238552/275‑1 (MQ=255) tAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTc > 8:429652/1‑149 (MQ=255) aaaaaGGCGCAGAATCCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTc > 7:1482043/2‑149 (MQ=255) aaaGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCgg < 7:921820/63‑1 (MQ=255) aaGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGc < 8:1661061/50‑1 (MQ=255) aaGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTCCcg > 8:228541/1‑149 (MQ=255) aaGGCGCAGAATCCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGa < 8:585388/141‑1 (MQ=255) cgcAGCATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTCTTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATTCGCACATGGCGAATAAACTGGAGTTTCCAGGTGGTAAAATTGAATTGGGTGAAACGCCGGAAAAGCACGTGGGTCGTGAACTTCAGGAAGAAGTCGGGATTACCCCCCAACCATTTTCGCTATTTGAAAAACTGGCATATGAATTCCCGGACCGACatat > 4:191189/1‑275 (MQ=255) gcAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTCCCGGCGGt > 7:1610675/1‑149 (MQ=255) gATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAAc < 7:1114914/93‑1 (MQ=255) gATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACAAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTCCCGGCGGTaaaa < 5:1396629/149‑1 (MQ=255) | ATCAGTACGCTGAGCAAAGTTCAGGTACGTATGCCTGAAGAGGTTGAGGAGCTGGAACAACAGCGTCGTATGGAAGCCGAGCGTTTAGCG‑CAAATGCAGCAGCTTAGCCATCAGGATGACGACTCTGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTG‑CCATGGCCGCCTGCAAT‑AAAAGCTAACTGTTGAAGTAAAAGGCGCAGGATTCTGCGCCTTTTTTATAGGTTTAAGACAATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTCCCGGCGGTAAAATTGAAATGGGTGAAACGCCGGAACAGGCGGTGGTGCGTGAACTTCAGGAAGAAGTCGGGATTACCCCCCAACATTTTTCGCTATTTGAAAAACTGGAATATGAATTCCCGGACAGGCATAT > NC_000913/110745‑111282 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |