| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,795,227 | A→T | 5.9% | intergenic (‑75/+26) | btuC ← / ← ihfA | vitamin B12 ABC transporter permease/integration host factor (IHF), DNA‑binding protein, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,795,227 | 0 | A | T | 5.9% | 696.4 / 22.2 | 200 | intergenic (‑75/+26) | btuC/ihfA | vitamin B12 ABC transporter permease/integration host factor (IHF), DNA‑binding protein, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base A (105/81); new base T (7/5); total (112/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.00e-01 | |||||||||||
Only 100 of 203 total aligned reads displayed.
CAATACAGCCAGCGTACGTGGCAGGCGAATTTGCCAGACGAACAGTTCGCCACGAGGAGTAAACCAGTCACCTGGCGAGATCCATTGTTCACCGGCGCAAAGGCTTAAGAGAAGCGCCAGCAGCATCAAAACTGACAGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGTTACGTCCCGGGCGTTGATTCTTATCACGCAGATCGAAGTTACCAAAACCAGAGAGTTTCACCTGTTCGCCGTTTTCCAGAGCGCGACGGATCTCTTCGAAAAACAGTTCAACCAGTTCTTTGGCATCCCGCTTGCT > NC_000913/1794961‑1795498 | cAATACAGCCAGCGTACGTGGCAGGCGAATTTGCCAGACGAACAGTTCGCCACGAGGAGTAAACCAGTCACCTGGCGAGATCCATTGTTCACCGGCGCAAAGGCTTAAGAGAAGCGCCAGCAGCATCAAAACTGACAGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCg < 2:267843/272‑1 (MQ=255) tACAGCCAGCGTACGGGGTATGCGAATTGGCCAGCAGAACAGTTGGGCACGAGGAGTAAACCAGTCACCTGGCGAGATCCATTGTTCACCGGCGCAAAGGCTTAAGAGAAGCGCCAGCAGCATCAAAACTGACAGGCAGAATAACCAGCGAATATTTTGTCGCTGTGGTTGGCGGGCAAGTGTCAGCATGGTAGCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑ttt < 4:7613/275‑1 (MQ=255) aTCCATTGTTCACCGGCGCAAAGGCTTAAGAGAAGCGCCAGCAGCATCAAAACTGACAGGCATAATAACCAGCGAATATTTTGTCGATGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑GTTTTAGATAGAGCCGATTACTCGTATTTGGGCGATGCGTTTTCGACCCGGCTTTTTACCTTCTTCCCGGGTCTTAAgg > 4:661429/1‑275 (MQ=255) tCCATTGTTCACCGGCGCAAAGGCTTAAGAGAAGCGCCAGCAGCATCAAAACTGACAGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGTTCTGAAGGTccc > 1:31675/1‑276 (MQ=255) cGGCGCAAAGGCTTAAGAGAAGCGCCAGCAGCATCAAAACTGACAGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCg > 2:548059/1‑275 (MQ=255) gtagaaggtgtAAGGGAAGCGCCCGCAGCATCAAAACTGACAGGCATAATAACACGCGAATATTGTGGCGCGGTTGTTGGCGGGAAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGAGTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTg < 4:118864/264‑1 (MQ=255) aaGGCTTAAGAGAAGCGCCAGCAGCATCAAAACTGACAGGCATAATACCCAGCGAATATTTTGTCGCTGTGTTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTa < 2:170303/275‑1 (MQ=255) aGCGCCAGCAGCATCAAAACTGACAGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGcc > 1:203702/1‑279 (MQ=255) aGCGCCAGCAGCATCAAAACTGACAGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGGAATGGGAATATCCt > 2:218666/1‑275 (MQ=255) gcagcaTCAAAACTGACAGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCag > 6:215928/1‑149 (MQ=255) gtCAAAAGTGACAGGCATAAGAACCTGCGAATATTTTTTCGCTGTTGTTGGAGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTc < 2:431748/273‑1 (MQ=255) aTCAAAACTGACAGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCgg > 5:477812/1‑149 (MQ=255) tCAAAACTGACAGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGc > 7:989494/1‑149 (MQ=255) aaaaCTGACAGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑t > 7:747652/1‑149 (MQ=255) aaaCTGACAGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑tt < 6:514617/149‑1 (MQ=255) aCTGACAGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCGGAAGTGTCATGGCGTTGATTTTACGGTGCCTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCTCTGCGGCC‑tttt < 7:44874/149‑1 (MQ=255) gACAGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTttag < 5:758704/149‑1 (MQ=255) aGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCTCTGCGGCC‑tttt > 5:784624/1‑143 (MQ=255) aaCCAGCGAATATTTTGTCGCGGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGAtt > 5:1482241/1‑149 (MQ=255) aGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGTTACGTc > 1:122429/1‑259 (MQ=255) aGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGTTACGTCCCGGGCg > 1:215999/1‑266 (MQ=255) aGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGAAGAGCg < 6:1217408/123‑1 (MQ=255) aGCGAATATTTTGTCGCTGTTGTTAGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTAGATTTTACGGTGACTCTTCGACAGTAAGAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATGAGATTACTc > 7:1425965/1‑149 (MQ=255) ctaaTATTTTGTCGGGGTGGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGGGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGTTACGTCCCGGGCGTTGATTCTTATCACg < 1:211090/277‑1 (MQ=255) aaTATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCAcgcg < 2:541782/211‑1 (MQ=255) atTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTg > 6:576631/1‑149 (MQ=255) ttttGTCGCTGTTGTTGGCGGGCAAGTGTCAGCCTGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGGCTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTgg < 7:1028068/149‑1 (MQ=255) tttGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGATAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTggg > 7:1398126/1‑149 (MQ=255) tCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGaa < 7:1251117/149‑1 (MQ=255) gCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGc > 5:608609/1‑149 (MQ=255) cTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTggg > 7:308497/1‑142 (MQ=255) gttgttGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGc < 4:558767/104‑1 (MQ=255) tgGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGa < 6:1680668/149‑1 (MQ=255) gtgtCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATATTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCtttt < 8:1108973/149‑1 (MQ=255) cAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAAc < 8:71830/149‑1 (MQ=255) gCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTttagtta > 7:133886/1‑97 (MQ=255) gCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTttagtta < 8:133886/97‑1 (MQ=255) gCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACtt < 6:962661/149‑1 (MQ=255) gCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACtt > 6:427049/1‑149 (MQ=255) gCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACtt > 5:1410651/1‑149 (MQ=255) catgtgaTCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGTTACGTCCCGGGCGTTGATTCTTATCACGCAGATCGAAGTTACCAAAACCAGAGAGTTTCAc < 2:661434/268‑1 (MQ=255) cATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTc > 5:1329588/1‑149 (MQ=255) ggTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTGTGAAGGTCACCACGCGCAGTGCTGTAATGGGAATCTCCTCTCCCGTTTTCGGGTTACGTCCCGTGCGTTGATTCTTATACCGGAGACCACATTTACCAAAACCAGGACGTTTCAccgtt > 4:19365/1‑272 (MQ=255) tATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGtttt > 8:1251611/1‑124 (MQ=255) tATCCGTGCTGCTGAAGTGTCATGCCTTTGATTTTACGGTGACTCGTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTCTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGAccc < 1:283609/130‑1 (MQ=255) tCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCgg > 7:1174525/1‑149 (MQ=255) gTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTc > 8:817979/1‑149 (MQ=255) ttCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCTCCCGTTTTCGGGTTACGTCCCGGGCGTTGATTCTTCACCCGCAGTTCGAAGTTACCAAAACAAGAAGTTTTCACCTGTTAGCCGt > 4:184910/1‑274 (MQ=255) ctgctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGAt > 3:233506/1‑86 (MQ=255) ctgctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCACGTTTTCGGGTTACGTCCCGGGCGTTGATTCTTATCACGCAGATCGAAGTTACCaaaa > 2:383622/1‑247 (MQ=255) tgctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGaa < 5:1652452/149‑1 (MQ=255) ctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGc > 5:65400/1‑69 (MQ=255) ctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGc < 6:65400/69‑1 (MQ=255) ctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTcacca > 4:426808/1‑155 (MQ=255) tgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGt > 6:1529695/1‑149 (MQ=255) aGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCAcgcg < 2:426812/155‑1 (MQ=255) tgtCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTg < 8:1466382/94‑1 (MQ=255) tgtCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTg > 7:1466382/1‑94 (MQ=255) tCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCAcg > 8:188076/1‑149 (MQ=255) aTGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCAcgcg > 7:213760/1‑149 (MQ=255) tGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACgcgc > 6:20329/1‑149 (MQ=255) ggCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGAccc < 2:676358/107‑1 (MQ=255) gATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTCATGGGAATATCCTCGCCCGTTTTCGGGTTACGTCCCGGGCGTTGATTCTTATCACGCAGAGCGAAGGTAcc > 1:194881/1‑222 (MQ=255) gATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGTTACGTCCCGGGCGTTGATTCTTATCACGCAGATCGAAGTTACCAAAACCAGAGAGTTTCACCTGTTCGCCGTTTTCCAGAGCGCGACGGATCTCtt > 2:189403/1‑275 (MQ=255) aTTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGt > 7:1275048/1‑149 (MQ=255) ggTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGa > 7:1626038/1‑149 (MQ=255) tGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAat > 6:110046/1‑149 (MQ=255) aCTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCNCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGTTAGGTCCCGGGCGTTGCTTTTTAGACCGCAGNTCGAAGTTACCAAAACCAGAAAGTTTCACCGTTTCGCGGGTTTCCNANGCGGGACGGAACATTTCGAAAAAAAgat > 3:81832/1‑273 (MQ=255) aCTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAAt > 1:24759/1‑141 (MQ=255) tctTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATcc > 7:168606/1‑149 (MQ=255) ctTAGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTg < 2:588801/131‑1 (MQ=255) ttCGACAGTTAAAAGGAAAAAG‑GCCGCAGAGTGGTC‑TTTTTATGTAGATCAGATTGCTCGTCTATGGGCGAAGCGCTTTCGACCCGGCTCTTTAACTGCTGCCCGGGTCTGAAGGTCCCCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGTTACGTCCCGGGCGTTGATTCTTATCACGCAGATCGAAGTTACCAAAACCAGAGAGTTTCACCTGTTCGCCGTTTTCCAGAGCGCGACGGATCTCTTCGAAAAACAGTTCAAc < 4:617106/275‑1 (MQ=255) agggacaggaaaagaaaaAAG‑GCCGCGAGGGGGGC‑TTTTTAGTTGGATCAAATTACTCGTCTTTGGGGGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGTTACGTCCCGGGCGTTGATTCTTATCACGCAGATCGAAGTTACCAAAACCAGAGAGTTTCACCTGTTCGCCGTTTTCCAGAGCGCGACGGATCTCTTCGAAAAACAGTTCAAc < 4:630894/266‑1 (MQ=255) cGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGc < 7:422558/149‑1 (MQ=255) aCAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGccc > 5:335257/1‑149 (MQ=255) aGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCt > 4:345014/1‑94 (MQ=255) tGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTaa > 8:443524/1‑87 (MQ=255) tGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGcc > 4:471880/1‑119 (MQ=255) tGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATggg > 7:1172427/1‑132 (MQ=255) tGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATggg < 8:1172427/132‑1 (MQ=255) tGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGttt > 8:348993/1‑149 (MQ=255) aaaagaaaaAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGccc < 2:345018/94‑1 (MQ=255) aaagaaaaAAGTGCCGCCGGTTTGCC‑TTTTTAGTTAGTTAAGTCTACTCGTCTTGGGGCGAAGCTTGTTCGACCTCGCTTTNTTACTTCGTCCCGGGTCTGCATGTCGCCATGCGCCGTGCTGTAATGGGTATATCCTCGCCCGTTTTCGGGTTCCGTCCCGGGCGTTGATTCTTATCACGCAGTTCGAAGTTACCAAAACCATAGAGTTTCACCTGTTCGCCGTTTTCCAGAGCGCGACGGATCTCTTCGAAAAACAGTTCAACCAGTTCTTTGGCAt < 3:203702/279‑1 (MQ=255) aagaaaaAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGc < 2:471884/119‑1 (MQ=255) aagaaaaAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCgg > 5:870815/1‑149 (MQ=255) ctaaacaG‑GCCGCTCTGCGGCC‑TTTTTAGTTAGATCAGAGTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGCAATGGGAATATCCTCGCCCGTTTTCGGGt > 6:274044/3‑149 (MQ=255) taaaaaG‑GCCGCTCTGCGGCCTTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGt > 8:1198289/2‑149 (MQ=255) taaaaaG‑GCCGCTCTGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCggg < 6:1160001/146‑1 (MQ=255) taaaaaG‑GCCGCTCTGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCggg > 5:1160001/2‑147 (MQ=255) aaaaaaG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGtt < 8:168606/149‑1 (MQ=255) aaaG‑GCCGCTCTGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCgg > 8:310300/1‑143 (MQ=255) aaaG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTcac > 2:78336/1‑101 (MQ=255) aaaG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGTTACg > 6:534794/1‑149 (MQ=255) aaaG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGATTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACTACGCGACGTGCTGTAATGGGAATATCCTAGCCCGTTTTCGGGTTACg > 7:663988/1‑149 (MQ=255) aG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGTTACGTCCCGGGCGTTGATTCTTATCACGCAGATCGAAGTTACCAAAACCAGAGAGTTTCACCTGTTCGCCGTTTTCCAGAGCGCGACGGATCTCTTCGAAAAACAGtt > 2:630898/1‑251 (MQ=255) g‑gCAGCAGAGCGGCC‑TTTTTAGTTAGAGCAGATTACTCGTCGTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCATCACGCGCCGTGCTGTAATGGGAATATCCTCGACCGTTTTCGGGTTACGTct < 6:1351547/149‑2 (MQ=255) gCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCAcg < 4:78336/101‑1 (MQ=255) ccGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGTTACGTCCCg < 5:20329/149‑1 (MQ=255) ctgagagTGGCC‑TTTTTAGTTAGATCAGATTCCTCGTCTGTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCAGTTTTCGGGTTACGTCCCGGGCGTTGATTCTTATCACGCAGATCGAAGTTACCAAAACCAGAGAGTTTCACCTGTTCGCCGTTTTCCAGAGCGCGACGGATCTCTTCGAAAAACAGTTCAACCAGTTCTTTGGCATCCCGCTTGCt < 4:189400/272‑1 (MQ=255) gCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGTTAc < 7:870731/141‑1 (MQ=255) | CAATACAGCCAGCGTACGTGGCAGGCGAATTTGCCAGACGAACAGTTCGCCACGAGGAGTAAACCAGTCACCTGGCGAGATCCATTGTTCACCGGCGCAAAGGCTTAAGAGAAGCGCCAGCAGCATCAAAACTGACAGGCATAATAACCAGCGAATATTTTGTCGCTGTTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAG‑GCCGCAGAGCGGCC‑TTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCGTGCTGTAATGGGAATATCCTCGCCCGTTTTCGGGTTACGTCCCGGGCGTTGATTCTTATCACGCAGATCGAAGTTACCAAAACCAGAGAGTTTCACCTGTTCGCCGTTTTCCAGAGCGCGACGGATCTCTTCGAAAAACAGTTCAACCAGTTCTTTGGCATCCCGCTTGCT > NC_000913/1794961‑1795498 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |