New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4543430 =185 (1.010)3 (0.020) 3/238 NT 1.8% coding (316/549 nt) fimA major type 1 subunit fimbrin (pilin)
?NC_000913 4543484 = 154 (0.900)coding (370/549 nt) fimA major type 1 subunit fimbrin (pilin)
Rejected: Frequency below/above cutoff threshold.

Only 100 of 216 total aligned reads displayed.

GTTAGGACAGGTTCGTACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCC  >  NC_000913/4543282‑4543578
                                                                                                                                                    |                                                                                                                                                    
gTTAGGACAGGTTCGTACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATa                                                                                                                                                      >  4:852321/1‑149 (MQ=255)
gTTAGGACAGGTTCGTACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATa                                                                                                                                                      >  1:809572/1‑149 (MQ=255)
 ttAGGACAGGTTCGTACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATAc                                                                                                                                                     >  4:1154940/1‑149 (MQ=255)
 ttAGGACAGGTTCGTACCGCATAGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATAc                                                                                                                                                     >  4:1560998/1‑149 (MQ=255)
     gcagcacccggggttgcggccccggttgcaaaataacgcgcctggaacggaatggtattggttccgttattccgggttgtttctgaactaaatgtcgcaccatccagcgtcagcgcagcacccgttctgtccaggatctgcacACCAAc                                                                                                                                                 <  2:1484125‑M1/6‑1 (MQ=255)
     gACAGGTTCGTACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAAc                                                                                                                                                 <  2:154888/149‑1 (MQ=255)
     gACAGGTTCGTACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAAc                                                                                                                                                 >  2:113540/1‑149 (MQ=255)
     gACAGGTTCGTACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAAc                                                                                                                                                 >  1:692840/1‑149 (MQ=255)
     gACAGGTTCGTACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAAc                                                                                                                                                 >  1:425375/1‑149 (MQ=255)
       agcacccggggttgcggccccggttgcaaaataacgcgcctggaacggaatggtattggttccgttattcagggttgtttctgaactaaatgtcgcaccatccagcgtcagcgcagcacccgttctgtccaggatctgcacACCAACGt                                                                                                                                               <  3:946379‑M1/8‑1 (MQ=255)
        gcacccggggttgcggccccggttgcaaaataacgcgcctggaacggaatggtattggttccgttattcagggttgtttctgaactaaatgtcgcaccatccagcgtcagcgcagcacccgttctgtccaggatctgcacACCAACGtt                                                                                                                                              <  2:129064‑M1/9‑1 (MQ=255)
          gTTCGTACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCt                                                                                                                                            >  2:1592785/1‑149 (MQ=255)
          gTTCGTACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCAGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCt                                                                                                                                            >  2:577601/1‑149 (MQ=255)
            tCGTACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTgg                                                                                                                                          <  2:430049/149‑1 (MQ=255)
               tACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGctc                                                                                                                                       >  1:195622/1‑149 (MQ=255)
                aCCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGctct                                                                                                                                      <  1:415073/149‑1 (MQ=255)
                 ccGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTg                                                                                                                                           <  2:1573835/143‑1 (MQ=255)
                 ccGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTg                                                                                                                                           >  1:1573835/1‑143 (MQ=255)
                 ccGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTg                                                                                                                                     >  3:659842/1‑149 (MQ=255)
                     aTCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCaga                                                                                                                                 <  2:1670459/149‑1 (MQ=255)
                            gCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGAATGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGc                                                                                                                          <  3:1335323/149‑1 (MQ=255)
                               caGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGc                                                                                                                       <  4:1362045/149‑1 (MQ=255)
                               caGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGc                                                                                                                       <  2:1241792/149‑1 (MQ=255)
                                  gaaggaGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAGCGTTCTGGCTCTGCAGAGTTCAGCTGCgag                                                                                                                    >  3:1375336/1‑147 (MQ=255)
                                  aaaataacgcgcctggaacggaatggtattggttccgttattcagggttgtttctgaactaaatgtcgcaccatccagcgtcagcgcagcacccgttctgtccaggatctgcacACCAACGt                                                                                                                                               <  3:349956‑M1/8‑1 (MQ=255)
                                      tcgCAACCAGTTCTGCTGGGGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGTGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAgc                                                                                                                >  2:720693/3‑149 (MQ=255)
                                       aGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTgg                                                                                                                                          <  1:737908/122‑1 (MQ=255)
                                          aaCCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGcaa                                                                                                            >  1:329843/1‑149 (MQ=255)
                                          aaCCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTAGCCTTTTTAGGTACGGCGATTGATGCGGGTCATAACAACGTTCAGGCTCTGCAGAGTTCAGCTGCGGGTAGCGcaa                                                                                                            >  4:1378583/1‑149 (MQ=255)
                                          aaCCAGTTCTGCTGTCAGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGcaa                                                                                                            <  1:577601/149‑1 (MQ=255)
                                           aCCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCa                                                                                                                            <  1:259724/132‑1 (MQ=255)
                                            ccAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGcaaca                                                                                                          >  2:1191709/1‑149 (MQ=255)
                                            ccAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGcaaca                                                                                                          >  3:798803/1‑149 (MQ=255)
                                             cAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGcaacaa                                                                                                         >  3:1015244/1‑149 (MQ=255)
                                                  ctgctgTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGtt                                                                                                    <  1:130503/149‑1 (MQ=255)
                                                   acggaatggtattggttccgttattcagggttgtttctgaactaaatgtcgcaccatccagcgtcagcgcagcacccgttctgtccaggatctgcacACCaa                                                                                                                                                  >  4:37‑M1/98‑102 (MQ=255)
                                                     ctgTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGgt                                                                                                 <  4:188133/149‑1 (MQ=255)
                                                       gTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTgg                                                                                                                                          >  3:210538/1‑106 (MQ=255)
                                                       aatggtattggttccgttattcagggttgtttctgaactaaatgtcgcaccatccagcgtcagcgcagcacccgttctgtccaggatctgcacACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTAgtgt                                                                                               >  2:216111‑M1/94‑149 (MQ=255)
                                                        tCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGtgtg                                                                                              >  3:972232/1‑149 (MQ=255)
                                                           gTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAg                                                                                           >  3:1282032/1‑149 (MQ=255)
                                                           gTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAg                                                                                           >  3:163653/1‑149 (MQ=255)
                                                           gTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAg                                                                                           >  1:105266/1‑149 (MQ=255)
                                                            tattggttccgttattcagggttgtttctgaactaaatgtcgcaccatccagcgtcagcgcagcacccgttctgtccaggatctgcacACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTgg                                                                                                  <  2:1607281‑M1/53‑1 (MQ=255)
                                                            tattggttccgttattcagggttgtttctgaactaaatgtcgcaccatccagcgtcagcgcagcacccgttctgtccaggatctgcacACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTgg                                                                                                  >  1:1607281‑M1/89‑141 (MQ=255)
                                                                aaCATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCt                                                                                      <  2:834221/149‑1 (MQ=255)
                                                                aaCATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCt                                                                                      <  3:323255/149‑1 (MQ=255)
                                                                aaCATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCt                                                                                      <  1:1148082/149‑1 (MQ=255)
                                                                  cATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTgg                                                                                    <  1:1504753/149‑1 (MQ=255)
                                                                        gCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTGGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGaa                                                                              <  3:692721/149‑1 (MQ=255)
                                                                         cTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAAc                                                                             <  4:1459875/149‑1 (MQ=255)
                                                                             aTGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGt                                                                         <  4:49196/149‑1 (MQ=255)
                                                                               gATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGa                                                                                   <  2:127063/137‑1 (MQ=255)
                                                                               gATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGtgc                                                                       >  4:1057540/1‑149 (MQ=255)
                                                                                       tACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGa                                                               >  4:946379/1‑149 (MQ=255)
                                                                                       tACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGATCAGCTGCGGGTAGCGCAACAAACGATGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGa                                                               >  3:344983/1‑149 (MQ=255)
                                                                                        aCCAATGTTGCATCTTAAGCCGCTGTGGCCTTTTTAGGTACGGCGATTTATGCGGGTCATACCAACGTTCTGGCTCTGCATAGTTCAGCTGCGGGTAGCGCAACACACGTTGTTGTGCAGTTCCTGGTCAGAACGGGTGCTGAGCTGAc                                                              >  4:741508/1‑149 (MQ=255)
                                                                                          cAATGTTTCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGc                                                            >  2:927800/1‑149 (MQ=255)
                                                                                            aTGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGgt                                                                                                 <  3:494186/110‑1 (MQ=255)
                                                                                            aTGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTg                                                          <  1:634925/149‑1 (MQ=255)
                                                                                              gTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGa                                                        <  1:353887/149‑1 (MQ=255)
                                                                                              gTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGa                                                        <  2:783855/149‑1 (MQ=255)
                                                                                                   aTCTAAAGCCGCTGTTGCTTTTTTAGGTACGGCGATTGATGCGGGTCACACCATCGGTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGGGTAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTg                                                   <  4:527737/149‑1 (MQ=255)
                                                                                                    tCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGc                                                  >  4:563375/1‑149 (MQ=255)
                                                                                                    tCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGc                                                  <  1:151201/149‑1 (MQ=255)
                                                                                                     cTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTgcgc                                                                  <  3:1457259/132‑1 (MQ=255)
                                                                                                          gCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCaga                                                                                                                                 <  3:611238/64‑1 (MQ=255)
                                                                                                            cGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAg                                                                                                                 <  4:908087/78‑1 (MQ=255)
                                                                                                            cGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAg                                                                                                                 >  3:908087/1‑78 (MQ=255)
                                                                                                               tGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGctc                                                                                                                                       <  2:637319/53‑1 (MQ=255)
                                                                                                               tGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGtt                                       >  1:1268167/1‑149 (MQ=255)
                                                                                                               tGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGtt                                       <  1:1592785/149‑1 (MQ=255)
                                                                                                                 ttGCCTTTTTAGGTACGGCGATTGATGCGGGTCCTACCAACGTTCTGGCTTTGCAGAGGTCAGCTGTGGGTGGCGCAACAAACGTTGGGGTGCAGATCCTGGACAGACCGGGTGCTGCGCTGACGCTGGTGTGTGGGACATGTAGtgaa                                     >  4:256700/1‑146 (MQ=255)
                                                                                                                 ttGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCa                                     >  4:125163/1‑149 (MQ=255)
                                                                                                                 ttGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTAAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCa                                     >  2:303501/1‑149 (MQ=255)
                                                                                                                   gCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGa                                   >  3:387193/1‑149 (MQ=255)
                                                                                                                     cTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTg                                                                                     >  3:1106290/1‑97 (MQ=255)
                                                                                                                     cTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTg                                                                                     <  4:1106290/97‑1 (MQ=255)
                                                                                                                     cTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGaaa                                 >  3:1483352/1‑149 (MQ=255)
                                                                                                                      tttttAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAaac                                >  2:1262387/1‑149 (MQ=255)
                                                                                                                      tttttAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAaac                                >  3:1199520/1‑149 (MQ=255)
                                                                                                                       ttttAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAaaca                               >  4:197217/1‑149 (MQ=255)
                                                                                                                        tttAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAaacaa                              <  2:350789/149‑1 (MQ=255)
                                                                                                                            ggTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCt                          <  1:1541572/149‑1 (MQ=255)
                                                                                                                            ggTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCt                          <  4:163653/149‑1 (MQ=255)
                                                                                                                            ggTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCt                          <  4:916152/149‑1 (MQ=255)
                                                                                                                             gTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTg                         <  4:1199520/149‑1 (MQ=255)
                                                                                                                               aCGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGaa                       >  1:1236144/1‑149 (MQ=255)
                                                                                                                               aCGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGaa                       <  1:1191709/149‑1 (MQ=255)
                                                                                                                                      ttGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGa                <  4:828926/149‑1 (MQ=255)
                                                                                                                                        gATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAAc              >  3:871664/1‑149 (MQ=255)
                                                                                                                                             gggTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATa         >  4:616916/1‑149 (MQ=255)
                                                                                                                                              ggTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATAc        <  1:1282817/149‑1 (MQ=255)
                                                                                                                                              ggTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATAc        >  1:660368/1‑149 (MQ=255)
                                                                                                                                               gTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATAcc       >  2:800476/1‑149 (MQ=255)
                                                                                                                                                tCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCa      <  3:926353/149‑1 (MQ=255)
                                                                                                                                                  aTACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCAtt    >  3:1512681/1‑149 (MQ=255)
                                                                                                                                                   tACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTc   <  4:34513/149‑1 (MQ=255)
                                                                                                                                                    ACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGAt                                                       <  3:195403‑M1/96‑1 (MQ=255)
                                                                                                                                                    ACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTcc  <  4:1307459‑M1/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GTTAGGACAGGTTCGTACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCC  >  NC_000913/4543282‑4543578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.