New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4636324 =156 (0.850)3 (0.020) 3/242 NT 2.1% coding (318/690 nt) creB response regulator in two‑component regulatory system with CreC
?NC_000913 4636375 = 135 (0.780)coding (369/690 nt) creB response regulator in two‑component regulatory system with CreC
Rejected: Frequency below/above cutoff threshold.

Only 100 of 213 total aligned reads displayed.

TGCCGGATATTAGCGGCTTTGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGA  >  NC_000913/4636176‑4636472
                                                                                                                                                     |                                                                                                                                                    
tGCCGGATATTAGCGGCTTTGGATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACTTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATTGCCTGCCG‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTT                                                                                                                                                      >  2:678451‑M1/1‑149 (MQ=255)
 gcggcccggtgacttgagtaacgtcttcaacaataaaaactcataccgagtcagcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttct                                                                                                                                                      <  2:389106‑M1/1‑1 (MQ=255)
  cggcccggtgacttgagtaacgtcttcaacaataaaaactcataccgagtcagcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttctt                                                                                                                                                     >  3:783602‑M1/148‑149 (MQ=255)
  cggcccggtgacttgagtaacgtcttcaacaataaaaactcataccgagtcagcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttctt                                                                                                                                                     >  1:602667‑M1/148‑149 (MQ=255)
  ccGGATATTAGCGGCTTTGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTC                                                                                                                                                    >  4:471474‑M1/1‑149 (MQ=255)
  ccGGATATTAGCGGCTTTGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTC                                                                                                                                                    >  4:1164426‑M1/1‑149 (MQ=255)
   cGGATATTAGCGGCTTTGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCA                                                                                                                                                   <  1:578744‑M1/149‑1 (MQ=255)
    ggATATTAGCGGCTTTGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCAC                                                                                                                                                  >  3:926383‑M1/1‑149 (MQ=255)
    gcccggtgacttgagtaacgtcttcaacaataaaaactcataccgagtcagcgctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCa                                                                                                                                                   <  1:999157‑M1/4‑1 (MQ=255)
         ttAGCGGCTTTGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCcgc                                                                                                                                             <  4:1401972/149‑1 (MQ=255)
          tAGCGGCTTTGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCcgcg                                                                                                                                            >  4:681012/1‑149 (MQ=255)
            gCGGCTTTGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGaa                                                                                                                                          <  3:880512/149‑1 (MQ=255)
            gCGGCTTTGAATTGTGCCGCAAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGaa                                                                                                                                          <  3:849039/149‑1 (MQ=255)
              ggCTTTGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAgt                                                                                                                                        <  3:1657526/149‑1 (MQ=255)
              ggCTTTGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAgt                                                                                                                                        <  3:1164426/149‑1 (MQ=255)
                cTTTGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAgtgt                                                                                                                                      >  3:1342746/1‑149 (MQ=255)
                 tttGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAg                                                                                                                                         <  2:1330338/145‑1 (MQ=255)
                 tttGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAg                                                                                                                                         >  1:1330338/1‑145 (MQ=255)
                  ttGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTgc                                                                                                                                    <  4:1342746/149‑1 (MQ=255)
                  ttGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTgc                                                                                                                                    <  1:13597/149‑1 (MQ=255)
                    gAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTgcgc                                                                                                                                  >  2:1649814/1‑149 (MQ=255)
                       ttGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCGTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAg                                                                                                                               >  1:250665/1‑149 (MQ=255)
                        tgtgCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAgg                                                                                                                              <  1:1645164/149‑1 (MQ=255)
                           gccgccAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTAGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGt                                                                                                                            <  2:987515/149‑1 (MQ=255)
                           agcgccAGTAACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTg                                                                                                                           >  2:826575/3‑149 (MQ=255)
                            gcgccAGTAACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAgt                                                                                                                                        <  1:449644/134‑1 (MQ=255)
                            ccgccAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTgc                                                                                                                          >  1:81930/1‑149 (MQ=255)
                              gccAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTgcgc                                                                                                                        >  3:1589906/1‑149 (MQ=255)
                                cAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCAc                                                                                                                      <  2:1496741/149‑1 (MQ=255)
                                       tGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTg                                                                                                               >  2:345108/1‑149 (MQ=255)
                                        ggCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGc                                                                                                              >  2:1142125/1‑149 (MQ=255)
                                           gcTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTc                                                                                                           <  4:62031/149‑1 (MQ=255)
                                             tCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgg                                                                                                         >  1:1142125‑M2/1‑147 (MQ=255)
                                             tCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgg                                                                                                         <  3:457913‑M2/149‑3 (MQ=255)
                                               cATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggt                                                                                                       <  4:1006994‑M2/149‑5 (MQ=255)
                                                aTCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggtg                                                                                                      <  3:1689225‑M2/149‑6 (MQ=255)
                                                  ccGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggtgaa                                                                                                    >  1:1165312‑M2/1‑142 (MQ=255)
                                                    ggCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaaa                                                                                                  <  2:523442‑M1/149‑47 (MQ=255)
                                                    ggCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaaga                                                                                                  >  2:144557/1‑149 (MQ=255)
                                                     gCGTTACCTGTGCTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaagaa                                                                                                 <  4:442689/149‑1 (MQ=255)
                                                     gCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaagaa                                                                                                 <  4:454194/149‑1 (MQ=255)
                                                        gctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttctt                                                                                                                                                     >  1:1545650‑M1/94‑95 (MQ=255)
                                                        gctaatggcgtgtcaaaccagctgatctgcgccgcgggttcattcaattcaaaatgtccaatacggatgacgggagacggcgtcgagaacttctt                                                                                                                                                     <  2:1545650‑M1/2‑1 (MQ=255)
                                                         tACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTtc                                                                                             <  2:574192/149‑1 (MQ=255)
                                                            cTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaaacggttta                                                                                           <  2:803666‑M1/148‑54 (MQ=255)
                                                               tACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACg                                                                                       >  1:1467402/1‑149 (MQ=255)
                                                                 cTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGaa                                                                                                                                          <  1:150576/96‑1 (MQ=255)
                                                                   gTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGt                                                                                   >  3:96196/1‑149 (MQ=255)
                                                                    ttCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGtc                                                                                  >  1:690931/1‑149 (MQ=255)
                                                                      ccTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGtctc                                                                                <  4:712530/149‑1 (MQ=255)
                                                                       cTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTcc                                                                               <  3:1412172/149‑1 (MQ=255)
                                                                        tGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTccc                                                                              >  4:1630499/1‑149 (MQ=255)
                                                                               ccGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATcc                                                                       >  4:1678684/1‑149 (MQ=255)
                                                                               ccGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTAGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATcc                                                                       <  1:128183/149‑1 (MQ=255)
                                                                                cGAAGTGAAGAGCTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGAGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCg                                                                      >  4:1057917/1‑149 (MQ=255)
                                                                                 gAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGt                                                                     >  4:762679/1‑149 (MQ=255)
                                                                                      gAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTgg                                                                >  4:76798/1‑149 (MQ=255)
                                                                                       aaGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCAc                                                                                                                      <  2:1506696/94‑1 (MQ=255)
                                                                                       aaGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTc                                                                                                           <  2:434848/105‑1 (MQ=255)
                                                                                            gTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAttt                                                          >  2:479834/1‑149 (MQ=255)
                                                                                              cGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttg                                                        >  1:897269/1‑149 (MQ=255)
                                                                                               gATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttga                                                       >  4:1223812/1‑149 (MQ=255)
                                                                                               gATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttga                                                       >  2:1275797/1‑149 (MQ=255)
                                                                                                aTCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaa                                                      >  2:306133/1‑149 (MQ=255)
                                                                                                 tCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat                                                     <  4:1650464/149‑1 (MQ=255)
                                                                                                     cTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattgaa                                                 <  2:55942/149‑1 (MQ=255)
                                                                                                     cTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattgaa                                                 <  3:164594/149‑1 (MQ=255)
                                                                                                       ttcaaaatgtccaatacggatgacgggagacggcgtcgagaacttcTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaagaa                                                                                                 >  1:404799‑M1/47‑100 (MQ=255)
                                                                                                                tGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACC‑TACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcgg                                      <  3:681012/149‑1 (MQ=255)
                                                                                                                 ggAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcgg                                      >  2:1103642/1‑149 (MQ=255)
                                                                                                                  gAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcggc                                     >  2:1148519/1‑149 (MQ=255)
                                                                                                                     aTTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCa                                  >  4:798617/1‑149 (MQ=255)
                                                                                                                       tGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGa                                <  1:72743/149‑1 (MQ=255)
                                                                                                                              gacgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTg                         >  3:1216302/1‑149 (MQ=255)
                                                                                                                               acgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTgg                        <  1:1116629/149‑1 (MQ=255)
                                                                                                                                 gacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGtt                      <  3:1261920/149‑1 (MQ=255)
                                                                                                                                   cTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAGGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTg                    <  3:548119/149‑1 (MQ=255)
                                                                                                                                    tACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGa                   <  4:1257421/149‑1 (MQ=255)
                                                                                                                                          gCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGcc             >  4:1511846/1‑149 (MQ=255)
                                                                                                                                            tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggtgaaaacggtttagccacgtagtcgtcagcaccaatttccagcccaagcaggcgatcgacctcttcacttcgggccgtcaggaacagtacag            >  1:803666‑M2/1‑53 (MQ=255)
                                                                                                                                            tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGac                  >  3:248081/1‑142 (MQ=255)
                                                                                                                                            tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCAt           >  4:929307/1‑149 (MQ=255)
                                                                                                                                            tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCAt           >  2:1616456/1‑149 (MQ=255)
                                                                                                                                            tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCAt           >  3:1130248/1‑149 (MQ=255)
                                                                                                                                            tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCAt           >  1:951555/1‑149 (MQ=255)
                                                                                                                                             aaaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAGGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGacac                >  1:1471775/1‑143 (MQ=255)
                                                                                                                                             aaaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGacac                <  2:1471775/143‑1 (MQ=255)
                                                                                                                                              aaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTa         >  1:122650/1‑149 (MQ=255)
                                                                                                                                              aaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTa         <  1:523002/149‑1 (MQ=255)
                                                                                                                                               aCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattgaa                                                 <  3:748522/108‑1 (MQ=255)
                                                                                                                                               aCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattgaa                                                 >  4:748522/1‑108 (MQ=255)
                                                                                                                                               aCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAg        >  4:255759/1‑149 (MQ=255)
                                                                                                                                                ccGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACACCGTCTCCCGTCATCCGTATTGGACATTttgaattga                                                  >  1:265020/1‑106 (MQ=255)
                                                                                                                                                 cGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTAtt                                                                  <  1:89906/89‑1 (MQ=255)
                                                                                                                                                 cGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTAtt                                                                  >  2:89906/1‑89 (MQ=255)
                                                                                                                                                  gTTTTCACCCCGCGAAGTGTGCGCCAGGTTGCGCACCTTACTGCGTCTGTTGAAGAAGTTCTCGACGCCGTCTCCTGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAgcgc     <  3:1057917/149‑1 (MQ=255)
                                                                                                                                                  gTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCa                             >  2:1417434/1‑125 (MQ=255)
                                                                                                                                                  gTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAgcgc     <  3:1254345/149‑1 (MQ=255)
                                                                                                                                                   ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggtgaaaacggtttagccacgtagtcgtcagcaccaatttccagcccaagcaggcgatcgacctcttcacttcgggccgtcaggaacagtacaggtaacgcc    <  4:1093009‑M2/149‑104 (MQ=255)
                                                                                                                                                     ttCACCCgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaaacggtttagccacgtagtcgtcagcaccaatttccagcccaagcaggcgatcgacctcttcacttcgggccgtcaggaacagtacaggtaacgccgg  >  1:1624960‑M1/1‑7 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
TGCCGGATATTAGCGGCTTTGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTT‑GGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGA  >  NC_000913/4636176‑4636472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.