Predicted mutation
evidence seq id position mutation freq annotation gene description
JC NC_000913 3,993,142 Δ6 bp 100% coding (1990‑1995/2547 nt) cyaA → adenylate cyclase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 39931411 (0.010)174 (0.950) 104/256 NT 99.4% coding (1989/2547 nt) cyaA adenylate cyclase
?NC_000913 3993148 = 1 (0.010)coding (1996/2547 nt) cyaA adenylate cyclase

Only 100 of 193 total aligned reads displayed.

GATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAAC  >  NC_000913/3993000‑3993295
                                                                                                                                                    |                                                                                                                                                   
atcgatgatcgaagccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaac                                                                                                                                                     <  1:767953‑M2/1‑1 (MQ=255)
   gatgatcgaagccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCttt                                                                                                                                                  >  4:1415136‑M2/146‑149 (MQ=255)
     tgatcgaagccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTcc                                                                                                                                                >  2:623530‑M2/144‑149 (MQ=255)
     tgatcgaagccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtatattgaaCTTTcc                                                                                                                                                <  1:977038‑M2/6‑1 (MQ=255)
      gatcgaagccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCa                                                                                                                                               <  2:1609234‑M2/7‑1 (MQ=255)
       atcgaagccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAg                                                                                                                                              <  1:69269‑M2/8‑1 (MQ=255)
        tcgaagccctgaaaactatgctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGc                                                                                                                                             >  3:991134‑M2/141‑149 (MQ=255)
          gaagccctgaaaactattctcggcaaaaggcatcaggacgccgcaccgccagatagcgtggaagtcttgtgttatagccagcagctgcgcgtcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAacac                                                                                                                                           >  2:539628‑M2/139‑149 (MQ=255)
            agccctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCAccc                                                                                                                                         <  4:342338‑M2/13‑1 (MQ=255)
                ctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCa                                                                                                                                     >  4:628553‑M2/133‑149 (MQ=255)
                ctgaaaactattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCa                                                                                                                                     <  3:1445024‑M2/17‑1 (MQ=255)
                        tattctcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgctgcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCg                                                                                                                             >  2:1412136‑M2/125‑149 (MQ=255)
                             tcggcaaaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGt                                                                                                                        >  1:1371753‑M2/120‑149 (MQ=255)
                                   aaatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAg                                                                                                                                    >  2:1333675‑M2/114‑131 (MQ=255)
                                    aatgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAgg                                                                                                                 >  1:353911‑M2/113‑149 (MQ=255)
                                     atgcatcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGgc                                                                                                                >  3:542525‑M2/112‑149 (MQ=255)
                                          tcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTgc                                                                                                           >  4:252015‑M2/107‑149 (MQ=255)
                                          tcaggacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTgc                                                                                                           >  4:1556371‑M2/107‑149 (MQ=255)
                                              gcACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGt                                                                                                       <  2:687203/149‑1 (MQ=255)
                                              gacgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTCCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGt                                                                                                       >  2:1491784‑M2/103‑149 (MQ=255)
                                                cgccgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttccgagtgtattgaaGTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGttt                                                                                                     <  4:1607188‑M2/49‑1 (MQ=255)
                                                   cgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTg                                                                                                  >  4:1407285‑M2/98‑149 (MQ=255)
                                                   cgcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTg                                                                                                  <  3:232924‑M2/52‑1 (MQ=255)
                                                    gcaccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTgg                                                                                                 <  4:1142093‑M2/53‑1 (MQ=255)
                                                     caccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGt                                                                                                <  2:999736‑M2/54‑1 (MQ=255)
                                                     caccgccagatagcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGt                                                                                                <  2:1371753‑M2/54‑1 (MQ=255)
                                                                agcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgggg                                                                                     <  2:936325‑M2/65‑1 (MQ=255)
                                                                agcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgggg                                                                                     <  4:542525‑M2/65‑1 (MQ=255)
                                                                agcgtggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgggg                                                                                     >  1:417289‑M2/85‑149 (MQ=255)
                                                                    tggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgttg                                                                                 <  4:1056540‑M2/69‑1 (MQ=255)
                                                                    tggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgttg                                                                                 <  4:1310545‑M2/69‑1 (MQ=255)
                                                                    tggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgtt                                                                                  <  1:937282‑M2/68‑1 (MQ=255)
                                                                     ggaagtcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgttgt                                                                                <  4:609480‑M2/70‑1 (MQ=255)
                                                                         gtcttctgttatagccagaatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGttctt                                                                            <  2:1029410‑M2/74‑1 (MQ=255)
                                                                          tcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGttcttc                                                                           >  2:356741‑M2/75‑149 (MQ=255)
                                                                          tcttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGttcttc                                                                           <  3:186258‑M2/75‑1 (MQ=255)
                                                                            ttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAg                                                                                                                                    <  2:183179‑M2/18‑1 (MQ=255)
                                                                            ttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAg                                                                                                                                    >  1:183179‑M2/73‑90 (MQ=255)
                                                                            ttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGttcttc                                                                           >  4:771302‑M2/73‑147 (MQ=255)
                                                                            ttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGttcttc                                                                           <  3:771302‑M2/75‑1 (MQ=255)
                                                                            ttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGa                                                                         >  3:685928‑M2/73‑149 (MQ=255)
                                                                            ttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGa                                                                         >  4:357977‑M2/73‑149 (MQ=255)
                                                                            ttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGa                                                                         >  2:248342‑M2/73‑149 (MQ=255)
                                                                            ttctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagcgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGa                                                                         >  4:898034‑M2/73‑149 (MQ=255)
                                                                             tctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGaa                                                                        >  3:131539‑M2/72‑149 (MQ=255)
                                                                             tctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGaa                                                                        >  2:1099559‑M2/72‑149 (MQ=255)
                                                                              ctgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAAc                                                                       <  3:1665507‑M2/79‑1 (MQ=255)
                                                                               tgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAg                                                                                                                  >  3:1633206‑M2/70‑105 (MQ=255)
                                                                               tgttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACg                                                                      >  1:511707‑M2/70‑149 (MQ=255)
                                                                                 ttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACTGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGcc                                                                    >  3:614324‑M2/68‑149 (MQ=255)
                                                                                 ttatagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGcc                                                                    >  2:1484856‑M2/68‑149 (MQ=255)
                                                                                    tagccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGttc                                                                              <  2:477132‑M2/72‑1 (MQ=255)
                                                                                       ccagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATg                                                              >  1:1153191‑M2/62‑149 (MQ=255)
                                                                                        cagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTc                                                                                                    >  3:710069‑M2/61‑110 (MQ=255)
                                                                                        cagcatctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTc                                                                                                    <  4:710069‑M2/50‑1 (MQ=255)
                                                                                           catctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATc                                                          >  2:1160596‑M2/58‑149 (MQ=255)
                                                                                           catctgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATc                                                          <  4:1448691‑M2/92‑1 (MQ=255)
                                                                                               tgcgcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTa                                                      >  1:1202230‑M2/54‑149 (MQ=255)
                                                                                                  gcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCg                                                                          >  4:864569‑M2/51‑126 (MQ=255)
                                                                                                  gcggcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCg                                                                          <  3:864569‑M2/76‑1 (MQ=255)
                                                                                                     gcttaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGaaa                                                >  3:1117689‑M2/48‑149 (MQ=255)
                                                                                                     gcgtaattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGAGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGaaa                                                <  2:943528‑M2/102‑1 (MQ=255)
                                                                                                         aattcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTgg                                            <  3:415397‑M2/106‑1 (MQ=255)
                                                                                                         aattcgtactcgcatgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTgg                                            <  4:588456‑M2/106‑1 (MQ=255)
                                                                                                           ttcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgg                                                                                       <  1:1670311‑M2/63‑1 (MQ=255)
                                                                                                           ttcgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGaa                                          >  2:905073‑M2/42‑149 (MQ=255)
                                                                                                             cgtactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGaaaa                                        <  4:1631882‑M2/110‑1 (MQ=255)
                                                                                                               tactcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACg                                      >  1:839773‑M2/38‑149 (MQ=255)
                                                                                                                  tcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGaaa                                                <  3:954470‑M2/102‑1 (MQ=255)
                                                                                                                  tcgcgtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAAc                                       >  1:626518‑M2/35‑145 (MQ=255)
                                                                                                                      gtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGa                               <  3:1407285‑M2/119‑1 (MQ=255)
                                                                                                                      gtgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGa                               >  4:1644972‑M2/31‑149 (MQ=255)
                                                                                                                       tgcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAg                              >  4:955743‑M2/30‑149 (MQ=255)
                                                                                                                        gcagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGAAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGt                             <  3:1218027‑M2/121‑1 (MQ=255)
                                                                                                                         cagcaactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGtt                            <  4:242557‑M2/122‑1 (MQ=255)
                                                                                                                            caactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTa                         >  1:52897‑M2/25‑149 (MQ=255)
                                                                                                                             aactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTAt                        <  3:1624349‑M2/126‑1 (MQ=255)
                                                                                                                             aactggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTAt                        >  1:1303170‑M2/24‑149 (MQ=255)
                                                                                                                               ctggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgttgtt                                                                               >  4:97639‑M2/22‑92 (MQ=255)
                                                                                                                                tggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGTGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGgc                     <  2:628409‑M2/129‑1 (MQ=255)
                                                                                                                                tggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGgc                     >  3:69798‑M2/21‑149 (MQ=255)
                                                                                                                                tggtttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGgc                     >  2:867577‑M2/21‑149 (MQ=255)
                                                                                                                                   tttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGcgcg                  >  1:635518‑M2/18‑149 (MQ=255)
                                                                                                                                    ttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCt                                                                                                   >  3:442843‑M2/17‑67 (MQ=255)
                                                                                                                                    ttctgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCt                                                                                                   <  4:442843‑M2/51‑1 (MQ=255)
                                                                                                                                       tgagtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGAttt              >  4:1242865‑M2/14‑149 (MQ=255)
                                                                                                                                          gtgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGc           >  1:455061‑M2/11‑149 (MQ=255)
                                                                                                                                          gtgtattgaaCTTTCCAGCACCCGCCAGGAAACAGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGACTTCGc           >  3:1344932‑M2/11‑149 (MQ=255)
                                                                                                                                           tgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCa          >  3:1581080‑M2/10‑149 (MQ=255)
                                                                                                                                           tgtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCa          <  2:56151‑M2/140‑1 (MQ=255)
                                                                                                                                            gtattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCAt         <  1:539628‑M2/141‑1 (MQ=255)
                                                                                                                                             tattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGTTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGt                             >  2:1638198‑M2/8‑128 (MQ=255)
                                                                                                                                             tattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAAt                                                               >  4:1023469‑M2/8‑94 (MQ=255)
                                                                                                                                             tattgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAAt                                                               <  3:1023469‑M2/87‑1 (MQ=255)
                                                                                                                                               ttgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAAc      >  4:681889‑M2/6‑149 (MQ=255)
                                                                                                                                               ttgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAAc      >  1:614653‑M2/6‑149 (MQ=255)
                                                                                                                                               ttgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAAc      >  3:1514574‑M2/6‑149 (MQ=255)
                                                                                                                                               ttgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAAc      >  1:1537399‑M2/6‑149 (MQ=255)
                                                                                                                                                tgaaCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACa     >  1:210731‑M2/5‑149 (MQ=255)
                                                                                                                                                   aCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAAc  <  4:806787‑M2/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAAC  >  NC_000913/3993000‑3993295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.