New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1299498	1 (0.010)	72 (0.530)	59/510	0.8	98.6%	intergenic (+253/‑1684)	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
	?	NC_000913	1300698 =	1 (0.010)					intergenic (+1453/‑484)	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

CTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTACTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATT  >  NC_000913/1300427‑1300959                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                      cTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACTTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGCATTCACCCGCTTATTCGCACCTTCCCTAaataa                                                                                                                                                                                                                                                                    >  4:450994/1‑275 (MQ=11)       ttgcttaattaattcatttcaaatgaaacggagctgccatgatccgtttacttcgtcattatttttactttgttcccgcgcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatgtccttaactgcttctcctcaccatcatgttattttcgccacatcataatcatgggcttgctgaagaataagtgaaatgatattattaattacactgcctttggtagaggaaagtgctaaataataat                                                                                                                                                                                                                                                                <  1:256161‑M2/8‑1 (MQ=255)         gcttaattaattcctttcaaatgaaacggagctgccatgctccgtttacttcgtcattatttttactttgttcccgcgcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCaa                                                                                                                                                                                                                                                             <  1:41971‑M2/11‑1 (MQ=255)          cttaattaattcctttcaaatgaaacggagctgccatgctccgtttacttcgtcattatttttactttgttcccgcgcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaacttacagttagttataaggatttccttaactgcttctcatcaccatcatgttattttcgccatatcataatcctgcgctcgctgaacaataattgaaatgttcttattaattacaccacttttgatcgatgaaagtccaaaATAATAATCAAtt                                                                                                                                                                                                                                                           >  4:221770‑M2/263‑275 (MQ=255)                taattcctttcatattaatcgttgctgccatgctctgtttacttcatcattattcttacgttgttcccgctcagttatcaaaagcaaaaggaatagggtaaaatattcttctcaaattacagtgagttataaggatttccttaacttcttatcctcaccagcatgttattttcgccacatcataatcctgggctttctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaAGTATAATCAATTGTTaaa                                                                                                                                                                                                                                                     <  2:641655‑M2/19‑1 (MQ=255)                     cctttcaaatgaaacggagctgccatgctacgtttacttcgtcattatttttactttgttcccgcgcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                                                                                                                                                                                                <  1:530439‑M2/24‑1 (MQ=255)                        ttcaattgaaacagagctgcccttctccgtttacttcgtcaatattttttcgtttttcccgcgcagttatcaaaagcaaaaagaatatgtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtgtg                                                                                                                                                                                                                                             <  1:389485‑M2/27‑1 (MQ=255)                        ttcaaatgaaacggagctgccatgctccgtttatttcgtcattatttttactttgttcccgcgcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggacttccttaactgctgctcctcaccatcatgttattttcgccacatcataatcctggtcttgctgacgaataattgaaatgttattattaattccactgcctttggtagcggaaagtgctaaATAATAATCAATTTTTAAATTATtgtg                                                                                                                                                                                                                                             >  1:649474‑M2/249‑275 (MQ=255)                                  acggagctgccatgctccgtttacttcgtcattatttttactttgttcccgcgcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCacta                                                                                                                                                                                                                                   >  1:415054‑M2/239‑275 (MQ=255)                                   cggatcttccatgttccgtttaattctttaatatttgtaatttgttccctcacagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacatttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactac                                                                                                                                                                                                                                  <  4:7161‑M2/38‑1 (MQ=255)                                   acggagctgccatgctccgtttacttcgtcattattttgactttgttcccgcgcagttagcagaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactac                                                                                                                                                                                                                                  <  2:146145‑M2/38‑1 (MQ=255)                                       gctgccatgctccgtttacttcgtcattatttttactttgttcccgcgcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGa                                                                                                                                                                                                                              >  3:562767‑M2/234‑275 (MQ=255)                                                    gtttacttcgtcattatttttactttgttcccgagcagttatcaaaagcaaaaggaataggtaaaaatattcttcttaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGa                                                                                                                                                                                                                  <  2:178359‑M2/54‑1 (MQ=255)                                                     tttacttcgtcattatttttactttgttcccgcgcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcatcaccatcatgttattttcgccacataataatcctgggcttgctcaagaataattgaaatgatattattaattccactgactttggtagtgcaaagtgctaaATAATAATAAATTTTTAAATTATTGTTTATTTCATTACTGGAATTGTAATCAGaaa                                                                                                                                                                                                                >  4:599952‑M2/220‑275 (MQ=255)                                                           tcgtcattatttttactttgttcccgcgcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAg                                                                                                                                                                                                          >  1:412140‑M2/214‑275 (MQ=255)                                                            cttcattatttttactttgttcccgcgcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaagatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                                                                                                                                                                                         <  2:221770‑M2/63‑1 (MQ=255)                                                            cgtcattatttttactttgttcccgcgcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                                                                                                                                                                                         <  1:550399‑M2/63‑1 (MQ=255)                                                            cattaatatttttacttttttcccgcgcagttatcaaaaacaaaaggaataggttaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcaccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                                                                                                                                                                                         <  3:649474‑M2/63‑1 (MQ=255)                                                               cattatttttactttgttcccgcgcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgatgaataatttaaatgatattattaattcaactgcctttgttagatgaaagtgctaaATAATAATCAATTTTTAAATTATTTTTCATTTCACTACTGGAATTGTAATAAGAAaagataaaaat                                                                                                                                                                                                      >  4:21159‑M2/210‑270 (MQ=255)                                                                  tatttttactatgttcccgcgcagttatcaaaggcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggattgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTTCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCt                                                                                                                                                                                                   <  1:114311‑M2/69‑1 (MQ=255)                                                                      tttactttgttcccgctcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGc                                                                                                                                                                                               <  1:21326‑M2/73‑1 (MQ=255)                                                                        tactttgttcccgcgcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCa                                                                                                                                                                                             <  1:562767‑M2/75‑1 (MQ=255)                                                                          tttttttccctagaagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaatttcagttaattataatgatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAt                                                                                                                                                                                           <  1:303288‑M2/77‑1 (MQ=255)                                                                          ctttgttcccgcgcagttatcaaaagcaaaatgaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAt                                                                                                                                                                                           <  1:384966‑M2/77‑1 (MQ=255)                                                                              gttcccgcgcagttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgtgcttgctgaagaataattaaactgatattattaattccactgactttggtagaggaaagtgctcaATAATAATCAATTGTAAAATTATTGTGCATTTAACTCCTGGAACTGCAAGCAGAAAAGATAGCCCTGTTTAGCCCatctcc                                                                                                                                                                                       >  3:662379‑M2/195‑274 (MQ=255)                                                                                         gttatcaaaagcaaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtacaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTATTGAAACTGTAATCAGAAAAGAAAGAAATGCTTAGACAATCTCtattgaattgat                                                                                                                                                                            >  4:202754‑M2/184‑274 (MQ=255)                                                                                                    caaaaggaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGATATGCTTAGCCAATCTATATGTGATTGAATTGAAAGAtgt                                                                                                                                                                 >  2:659306‑M2/173‑275 (MQ=255)                                                                                                          gaataggtaaaaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTa                                                                                                                                                           <  3:415054‑M2/109‑1 (MQ=255)                                                                                                                    aaatattcttctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTAACTACTGGAACTGTAATAAGAAAAGATAGACATGCTAAGCAATTCTCTATTTAATTAAATTAAAAGATTTTTGTTAAGGAATGGAt                                                                                                                                                 >  4:604446‑M2/157‑275 (MQ=255)                                                                                                                               tcaaattacagttcgttataaggatttccttaactgattctcctcaccatcatgttattttcgccacatcataatccttggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCtat                                                                                                                                        <  2:202754‑M2/128‑1 (MQ=255)                                                                                                                               tcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTAACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTATGGAATGGATGCAAGCTATAg                                                                                                                                      >  2:294322‑M2/146‑275 (MQ=255)                                                                                                                               tcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggattgcggaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCtata                                                                                                                                       <  1:301493‑M2/129‑1 (MQ=255)                                                                                                                                             gttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATGTCACTACTTGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTAAATTGAAAGTTGTTTTTTAAGGCCTGGATGAAAACTTTAGATTTTGATACGTTc                                                                                                                        >  3:760546‑M2/132‑275 (MQ=255)                                                                                                                                                      atttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGACAt                                                                                                                                                     >  2:229888‑M2/123‑237 (MQ=255)                                                                                                                                                      atttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctatggtagaggaaagtgctaaATAATAATCAATTGTTAAat                                                                                                                                                                                                                                                    >  2:473032‑M2/123‑142 (MQ=255)                                                                                                                                                        ttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCAAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAgaga                                                                                                             >  2:455375‑M2/121‑275 (MQ=255)                                                                                                                                                          ccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctatggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                                                                                                                                                                                                <  4:473032‑M2/24‑1 (MQ=255)                                                                                                                                                               actgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAATATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGTTGTTTGTTAAGGCATGGATGCAAGCTATAGTTTCTGTTACGGTCAATAAAATAGAATTGCtt                                                                                                      >  3:122476‑M2/114‑275 (MQ=255)                                                                                                                                                                ctgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgccttttgtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGTAACTGTAATCAGAAAAGATAGACATGCTTATCCAATATCTATTTGATTGAATTGAAAGCTGTTTGTTAAGGCATGGATGCAAGCTATGGATTCTGATACGGTAAATAAAAGAGAATTGCTTa                                                                                                     >  2:332124‑M2/113‑275 (MQ=255)                                                                                                                                                                     tctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATgg                                                                                                                                                   >  2:429667‑M2/108‑224 (MQ=255)                                                                                                                                                                           caccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCa                                                                                          <  2:21159‑M2/174‑1 (MQ=255)                                                                                                                                                                             ccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCa                                                                                                                                                                                                                                           >  3:383060‑M2/100‑128 (MQ=255)                                                                                                                                                                                tcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGAt                                                                                                                                                 >  2:371744‑M2/97‑215 (MQ=255)                                                                                                                                                                                 catgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTc                                                                                                                                                                                                                                       <  1:383060‑M2/33‑1 (MQ=255)                                                                                                                                                                                  attttatgttcgccacatcataattctgtgcttgctgaagaataattgaaatgatattataaattccacttccttttgtagagaaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGTAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTa                                                                                   <  2:418987‑M2/181‑1 (MQ=255)                                                                                                                                                                                    gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCaa                                                                                                                                             <  4:371744‑M2/123‑1 (MQ=255)                                                                                                                                                                                             gccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAAAAATTTTGCAAAATGTATTGGCGAGTaa                                                                        >  3:156299‑M2/84‑275 (MQ=255)                                                                                                                                                                                               catatcataatcctgtgcgtgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAGCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGa                                                                      <  2:186029‑M2/194‑1 (MQ=255)                                                                                                                                                                                                  atcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagatgaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGATAAGATAGACTTGCTTAGCCAATCTCTATTTTATTGAATTGAACGATGTTTGTTATGGAATGGATGCAAGCTATAGATTCTGATACTGTAAATAATAGAGAGTTGCTTCACAATTTTGCAAAATGTATTGGCGagtaataaac                                                                   >  4:299760‑M2/79‑273 (MQ=255)                                                                                                                                                                                                  atcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagcgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGATTAGCCAATCTCTATTTGCTTGAACTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATGGATTCTGATACGGGCAATAAAAGAGAATTGTTTAACAATCTTGCa                                                                                          >  1:263984‑M2/79‑252 (MQ=255)                                                                                                                                                                                                      taatactggtattactgaataataatttaaattatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCTATTGTTAAATTATTGTGCATTTCTCTACTGTAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTATATTTGATTGAATTGAAAGATGTTTGTTAAGGAATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAAt                                                                                      <  3:263984‑M2/178‑1 (MQ=255)                                                                                                                                                                                                       aatcttgggcttgctgaagaataattgaaatgatattattaattccaatggctttggtagaggaaattgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTTGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAGTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCAtt                                                              <  2:599952‑M2/202‑1 (MQ=255)                                                                                                                                                                                                              ggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCta                                                                                                                                         >  4:180112‑M2/67‑193 (MQ=255)                                                                                                                                                                                                              ggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTAc                                                        >  2:341269‑M2/67‑274 (MQ=255)                                                                                                                                                                                                                  tgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGa                                                                                                                                     <  2:180112‑M2/131‑1 (MQ=255)                                                                                                                                                                                                                                tgaaaatatattattaattccaatgcatttggtataggaaagtgctaaATAATAATCAATTTTTAAATTATTGTTCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGTCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTACTTTCCGGGCAACCGCCAGa                                     <  3:155879‑M2/227‑1 (MQ=255)                                                                                                                                                                                                                                   aaatttattaataattctactgatttgtatagaggaaagtgataaATTATAATAAATTTGTAAATTATGTTGCATTTCACTACTGGAACTGTAATTAGAAAAGATATACATGCTTAGCCAATCTCTATTTGAGTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGGCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTACTTTCCGGGCAACCGCCAGACGa                                  <  4:659306‑M2/230‑1 (MQ=255)                                                                                                                                                                                                                                    atgatattattaattccactgcctttggtagagtaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATCGTCATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTACTTTCCGGGAAACTTCCAGACGAt                                 >  1:360753‑M2/45‑275 (MQ=255)                                                                                                                                                                                                                                         attattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAtt                                                                                                                                                                                                                                                           >  3:322763‑M2/40‑52 (MQ=255)                                                                                                                                                                                                                                             ttaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTa                                                                                                                                                                                                                                                       <  1:322763‑M2/17‑1 (MQ=255)                                                                                                                                                                                                                                               aattccaatgacttttgtagaggaaaattcgaaATAATAATAAAGTGTTAAATTATTGTGAATTTCACTACGGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATAGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTACTTTCCGGGCAACCGCCAGACGATTCTTTATTGGt                      <  4:455375‑M2/242‑1 (MQ=255)                                                                                                                                                                                                                                                atttcactgattttggttaaggaaatagctaaATAATAATCAATTGTTAAATAATTGTGGTTTTAACTACTGGAACGGTAATCAGAAAAGATGGTCATGCTTGGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTAAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTACTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTa                     <  3:328139‑M2/243‑1 (MQ=255)                                                                                                                                                                                                                                                     actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTACTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATgag                >  1:328139‑M2/28‑275 (MQ=255)                                                                                                                                                                                                                                                      ctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACNTGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACATTTTTGAAAAATGTATTGGCTAGTAAGAACAGCATTTGGTACTTTCCGGGCAACCGCCATCAGATTGTTTATTGgtaattaaa               >  4:349384‑M2/27‑271 (MQ=255)                                                                                                                                                                                                                                                      ctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTACTTTCCGGGCAACCGCCATACGATTCTTTATTGGTAATgaga               >  1:517284‑M2/27‑275 (MQ=255)                                                                                                                                                                                                                                                      ctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTACTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATgaga               >  1:189202‑M2/27‑275 (MQ=255)                                                                                                                                                                                                                                                       tgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACANGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCAAGTAAGAACCGCATTTGGTACTTTCCGGTCAACCGCCAGACGATTCTTTATGGGTATTGAGaa              >  4:338624‑M2/26‑275 (MQ=255)                                                                                                                                                                                                                                                         cctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGATTAAGAACCGCATTGGGTACTTTACGGGCAACCGCCAGCCGATTATTTATTGGTAAGGAAaata            >  4:411485‑M2/24‑275 (MQ=255)                                                                                                                                                                                                                                                            tttgtaaaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATTTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTACTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAAtt         <  1:122476‑M2/255‑1 (MQ=255)                                                                                                                                                                                                                                                                   aggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGa                                                                                                                                                  >  4:50483‑M2/14‑131 (MQ=255)                                                                                                                                                                                                                                                                   aggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTACTTTCCGGGCAACCGCCAGACGATTCTTTATAGGTAATGAGAATAATTAACAAtt  >  1:14692‑M2/14‑275 (MQ=255)                                                                                                                                                                                                                                                                   aggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGACGAGTAAGAACCGCATTTGGTACTTTCCGGGCAACCTCCAGACGATTCTTTATTGGTCATGAGAGTAATTAACAAtt  >  2:165565‑M2/14‑275 (MQ=255)                                                                                                                                                                                                                                                                       aagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCa                                                                                                                                              <  2:50483‑M2/122‑1 (MQ=255)                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                      CTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTACTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATT  >  NC_000913/1300427‑1300959

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.