Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,875,5290CG20.0% 144.3 / 10.4 73S31C (TCC→TGC) yidXputative lipoprotein
Reads supporting (aligned to +/- strand):  ref base C (35/21);  new base G (14/0);  total (51/22)
Fisher's exact test for biased strand distribution p-value = 6.82e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGCTTTACTACTA  >  NC_000913/3875270‑3875799
                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                              
atgagtaCAACCTTATAGTGATGGACTACAATTTATGTATCAAAAAGAACAAAGAATAAAACAATAACATGCGTCGGGCAGAAAGCTTAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCGTTAAACGGATTAGCTACTCGTTTAAAGGATTATTCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGCTTCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCATAggg                                                                                                                                                                                                                                                                 <  4:421498/272‑1 (MQ=255)
     taCAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCTTACCGCAAAGGGTCGtt                                                                                                                                                                                                                                                            >  2:49715/1‑275 (MQ=255)
     taCAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCTTGTGTTCCCATACCGCAAAGGGTAGtt                                                                                                                                                                                                                                                            >  1:338608/1‑275 (MQ=255)
     taCAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCCTGGTTTCCCTTAACGCAAAGGGTAGtt                                                                                                                                                                                                                                                            >  1:393204/1‑275 (MQ=255)
       cAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCCTCGTTTCTCTGACCGCAAAGGGTAGtt                                                                                                                                                                                                                                                            >  1:353622/1‑273 (MQ=255)
          aCTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGTTAGTTCAGGa                                                                                                                                                                                                                                                       >  2:256244/1‑275 (MQ=255)
           cTTAAATTGTTGATATACAATTTGAATGACAAAAAGAGAATATCATCAAAACATGAATTGCGTGGAGCAGAAATAGGTCAAGGGTAATCATGCGCAAAATAGGATGAAAAGAATGGTATGGTTTCTACGGCTTAGCTACTCGTTTACAGGAGTAATCATGAAGGTGAATTTTAAGGGATTTTTTAATGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGGTGTATCGCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAgg                                                                                                                                                                                                                                                        <  4:425578/273‑1 (MQ=255)
            ttATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACAGCAAAGGGTAGTTCAGGaa                                                                                                                                                                                                                                                      >  2:485253/1‑274 (MQ=255)
               tatTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTGCCTTACCGCAAAGGGTAGTTCAGGAACGTa                                                                                                                                                                                                                                                  >  1:49308/1‑275 (MQ=255)
                    ttgtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCaa                                                                                                                                                                                                                                              >  1:67940/1‑274 (MQ=255)
                    ttgtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTTTGCTTTAACACAAAGAGTTATTCCGGAAAGTTTCaa                                                                                                                                                                                                                                              >  1:389893/1‑274 (MQ=255)
                      gtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTATGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCTTGTTTTGCCATACAGAAAAGGGTAGTTAAGGAAAGTATCAATc                                                                                                                                                                                                                                            >  1:20005/1‑274 (MQ=255)
                      gtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTGTGTTTTTCTTTAACACAAAAAGTAGTTCAGGatgtgtcactta                                                                                                                                                                                                                                            >  1:782995/1‑263 (MQ=255)
                      gtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTGTGTTTTACCTTAACAAAAAGGGTAGATCAGGAAAGTAACAATc                                                                                                                                                                                                                                            >  2:558471/1‑274 (MQ=255)
                      gtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTGTGTTCTGCTTGAACACAAAAAGTAGTTCAGGTCAGTATCAAtt                                                                                                                                                                                                                                            >  2:657206/1‑273 (MQ=255)
                      gtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTGTCGTTTGCTATAACACAAAGGGTCGAGCAGGAAAGTATCAATCg                                                                                                                                                                                                                                           >  2:442442/1‑275 (MQ=255)
                      gtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCCTGGTTTCCCATCACGCAAAGTGACGCTCAGGAACGTATCAAta                                                                                                                                                                                                                                            >  1:346337/1‑273 (MQ=255)
                      gtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGAAATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGTTTTCCCTTACCTCAAAGTGTAGTTCATGTAATTATTAATCg                                                                                                                                                                                                                                           >  1:645142/1‑275 (MQ=255)
                      gtAATACAATTTAGATCAAAAAAAGCAAAATGCATAAGAAAAGTACTTGCGTCGGAGAGAAATCTGAAAATGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGGATGCTTTCAACGGCGTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCACGGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCg                                                                                                                                                                                                                                           <  4:519085/275‑1 (MQ=255)
                            cAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTCTACAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCGGGTTTCCCATACCGAAAAGGTTAGTTCAGGAAAGTATCAATCGAAGGCa                                                                                                                                                                                                                                     >  4:455787/1‑275 (MQ=255)
                              aTTTAGATCACAAAAATAACAATTCATAAGAAAATGAGAAGCGTCTGGCATAAATCTTAAAAAGGATATCAGGAGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGa                                                                                                                                                                                                                                   <  3:489892/275‑1 (MQ=255)
                                        caAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCCTGTTTTGCCTTACAGAAAAAGGTAGTTCAGGAGAGTATCAATCGAAGTCAGACACAATTACt                                                                                                                                                                                                                         >  2:519610/1‑275 (MQ=255)
                                                   aggagtAAAAAAAGGAAATGTGGCGGGCAGAAACCTGAAAAGGGATATCAGGAGCTAAACAGGAGGGAAAGACGATTATGCTTTCAACGGCGAAGCTACTCGTTTAAAGGATTAATCATGAGGTTGAATTTTAAAGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTAGCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGc                                                                                                                                                                                                               <  3:67933/269‑1 (MQ=255)
                                                   aTGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTGGTTTCCTTTACCGAAAAAGGt                                                                                                                                                                                                                                                                >  2:626268/1‑225 (MQ=255)
                                                     acATAATAAAATGAAATGAGTCTGGCAAAAATCTGAAAAGGGATAACAGGCGATAAATAGGAGGGAAAGAAGAGTATGCTTGCAACCGCTTAGCTACTCGGTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACGTGCGCTGATGCTTTCAGGTTGTATCTCGTATTCTTTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAgg                                                                                                                                                                                                            <  3:728246/274‑1 (MQ=255)
                                                        tAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTGTGTTCTCCCATACCGCAAAGGGCAGTTCAGGAAAGTATCACTCGCATTCAGACACCATCCCTGGTATATCGCAGGCaa                                                                                                                                                                                                         >  2:270557/1‑275 (MQ=255)
                                                         aaaaaaaTGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTCAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTATGCCTTACCGCAAAGTGTAGTTCAGGGAAGTATCGATCTCAGTCCTACACCATCACTGTGTTCACGCAAGCaaa                                                                                                                                                                                                        >  2:295198/1‑275 (MQ=255)
                                                         aaaaaaaTGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTAGGCTCTGGTTTCCCATACCGATAAGGGTAGTTCAGGAGAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCaa                                                                                                                                                                                                         >  1:278698/1‑274 (MQ=255)
                                                              aaTGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCCTGGTTTCCTTTACAGCAAAGGGTAGTTCAGGAAAGTATAAATCGCAGTCAGACACCATCACTGGGACATTGCAGGCAAAAGATa                                                                                                                                                                                                   >  1:642216/1‑275 (MQ=255)
                                                                    aTGAGTCGGGCAGAAAGCAGAACAGTGATAACAGGCGCTAAACAGTAGTGAAAGAATAGTTAGCATTCAAAGTCGTAGCTACACGTTGAAAGGATTAATCATGAAGTTGACTTTTAAGGGATTTTTTAAGGCTGCCTGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATg                                                                                                                                                                                             <  4:256244/275‑1 (MQ=255)
                                                                                 aaaTCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCGTCTGCCAGAAAGAAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTTAGACACCATCACTGGGTTATCGAAGGCAAAAGATCAAAGTGGAAGAAAAGTCTa                                                                                                                                                                                >  2:501744/1‑275 (MQ=255)
                                                                                   aaattaaagaggATATCAGGGGCAATACGAGAGGGAAAGATGAGTTAGCTTTAAAACGTTGTGCTATTAATTTAAAGGATTAATAATGAAGATGAATTTTAAGGTATTTTATAAGGCTGCCGGTTTATACCCACTGGCGCTGATGCTGTCAGGCTGGATCTCGTATGCTCTGGTTTCCCATACCGGAAAGGGTAGTTCAGAAAAATATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAGGATAGTAATGGAACAAAAGGCTATg                                                                                                                                                                              <  4:49715/265‑1 (MQ=255)
                                                                                    tttGAAAAGAGGAAACAGGCGCAAAACAAGGGGGAAAGAAGAATGTGGGTTCAACGGCTTAGCTAATCGTTTTAAGTATAAAGAATGAAGTTGGATTTTAAGGCATTTTTTAAGGCTCCCGGGTTATTCCCACTGGGGATGATGCTTTCAGGATGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGt                                                                                                                                                                             <  3:523913/273‑1 (MQ=255)
                                                                                      tGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCCTGTTTTCCCATACAGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAACAGATAGTAATGAAACTAAAGGCTTTGtt                                                                                                                                                                            >  2:611835/1‑274 (MQ=255)
                                                                                                   aggtcgatAAACAGGAGGGAAATAAGTGTATTCTTTCAATGGCTTGGCTATTTGTTTAAATGATTAATCATGAAGTTTTATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCTACTTGAGCTGATTCGTTCAGGCTGTAGCTCGTATGCTCTGGTTTCCCATACCGCAAAGTGTAGTTAAGGAAATTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCATGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATc                                                                                                                                                              <  4:194028/268‑1 (MQ=255)
                                                                                                    agtcgcagaaCAGGAAGAGAAGAAAGATATGCTCGCAAGAGGTTTGCTACTTGTTAAAAGGAATGAACATTAAGTGGAATTTAAAGGGATTTTGAAAGGCAGAAGGTTTATTCCCACTGGATCTGATGCTTGCAGGATGAAACTCGTATGCTCTGGTTTCCCATAACGCCAAGTTTAGTTCAGGAAAGTATCAATTGCAGTCAGACACCATCACTGGGCTATCGGAGGCAAAAGATAGTAAGGGAACAAAAGGCTATGTTTTTGTAGGGGAATc                                                                                                                                                              <  3:278698/266‑1 (MQ=255)
                                                                                                       cgcTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCGCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCACCCCTGGGCTATCGCAGGCAAAAGATAGTAATGGAACACAAGGCAATGTTTTTGTAGGGGAAACGCTg                                                                                                                                                          >  3:479333/1‑275 (MQ=255)
                                                                                                                 gaggGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCCTGGTTTGCCAGACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATTACTGGGATATCGCAGGCAAAAGATAATATTGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTAACTTa                                                                                                                                                >  1:708645/1‑275 (MQ=255)
                                                                                                                      aaaGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAACGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACTTTATCACt                                                                                                                                           >  1:16090/1‑275 (MQ=255)
                                                                                                                              gTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCGTCTGCTTTACAGAAAAAAGTAGTTCAGGAAAGTATCAATCGCAGTCAGAAACCATCACTTGGCTATTGCATGCAAACGATCGTAATGGAACAAAACGCTATGTTTTTGTAGTGGAATCGCTGGATTACCTTATCACTGATGGGGc                                                                                                                                   >  1:786546/1‑275 (MQ=255)
                                                                                                                               tATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCaa                                                                                                                                                                                                                                                                     >  3:582286/1‑144 (MQ=255)
                                                                                                                               tATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCGTCTGCCATAAAGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCCCTGGGATATCGCAGTAAAAAGATAGTAATGGAAAAAAAGGCTATGTTTTCGTAGGGGATTCGTTGGATTACCTTATCCCTGATGGTGcc                                                                                                                                  >  2:302385/1‑275 (MQ=255)
                                                                                                                                   cTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAggg                                                                                                                                                                                                                                                                 <  1:582286/144‑1 (MQ=255)
                                                                                                                                    tttCCACGGATTAGTGATGCGTTTAATGGATTTAGTATTAAGTTGCATGTCAAGGGTTTTTTTAAGGATTCCGTTTTATTCCCGCTCGCGATTATGCTGTCGTTGTGGATCTAGTATGTTCTGGTGTCACAGACCGCAAAGGGTAGTTCAGGAAAGTATCAATCTCAGTCAGATACCATCACTGTGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGa                                                                                                                             <  4:87261/275‑1 (MQ=255)
                                                                                                                                    tttCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTGCTATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGGTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGa                                                                                                                             >  2:87261/1‑275 (MQ=255)
                                                                                                                                     ttCAACGGCTTAGCTACTCGTTTAAAGGATTAATCAGGTAGTTGAATTTTTAGGGATTTTTTAAGGTTGCCGGTTTATTCCAACAGGAACTGATGCTTTCAGGCTGAATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAAGCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGa                                                                                                                             <  2:455787/274‑1 (MQ=255)
                                                                                                                                      tCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTGTGTTTTGCCTTAACAAAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACa                                                                                                                           >  1:333989/1‑275 (MQ=255)
                                                                                                                                      tCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATAc                                                                                                                                                                                                                                                                          >  4:379162/1‑132 (MQ=255)
                                                                                                                                       cAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACAGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGTTGCCGATGACAt                                                                                                                          >  2:81728/1‑275 (MQ=255)
                                                                                                                                          cGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCa                                                                                                                                                                                                                                                                      <  2:379162/132‑1 (MQ=255)
                                                                                                                                              ttAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCCTGGTTTCCCATACAGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTCATGGAACAAAAGGCTATGTTTTTGTAGTGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAg                                                                                                                   >  2:474106/1‑275 (MQ=255)
                                                                                                                                                            ataGGAGTACTCATGAGGATGGATTTGAAGGAAGTGTTAATGACGTCAGGTTTATTCTAACTGTAGCTGATGATTAAAGGCATTATCAAGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTAAGACACCATCACTGGGCTATCGCAGGCAAAATTTAGTAATGTAACAAAAGGCTATGTTTTTGTAGGGTAATCGCTGGATTATCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATc                                                                                                      <  3:20005/272‑1 (MQ=255)
                                                                                                                                                                  ttAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCaa                                                                                                                                                                                                                                                                     >  1:415332/1‑109 (MQ=255)
                                                                                                                                                                   tAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTGACAAAAAAAGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACCTCGTTAAGATGCTCAATGATCCAGCACtt                                                                                              >  1:387491/1‑275 (MQ=255)
                                                                                                                                                                      tCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAggg                                                                                                                                                                                                                                                                 <  3:415332/109‑1 (MQ=255)
                                                                                                                                                                           aaGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTGCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGca                                                                                      <  1:479333/275‑1 (MQ=255)
                                                                                                                                                                           aaGTGGAATTTTAAGGGCTTGTTTAAGGGTGCGGGTTTAATCCCACTGGAGTGAATGCTTTTAGGCTGTATATCGTATGCTATGGATTCCCATACCGCAAAGGGTAATTCAGGAAAGTATCAATCGGAGTCAGAAACCAGAACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGca                                                                                      <  4:485253/275‑1 (MQ=255)
                                                                                                                                                                                        aGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACAcc                                                                                                                                                                                                                               >  1:745796/1‑125 (MQ=255)
                                                                                                                                                                                        aGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATTACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGtt                                                                         >  1:173081/1‑275 (MQ=255)
                                                                                                                                                                                             ttttttAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGa                                                                                                                                                                                           >  2:397645/1‑156 (MQ=255)
                                                                                                                                                                                                          ccGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCCCTTATGGTGCCGATGACATAGTTAAGATGCTCAATGATCCAGCACTTAACCGTCACAATATTCAGGTTGCCGCTGACGCGAGAttt                                                       >  4:49161/1‑275 (MQ=255)
                                                                                                                                                                                                          ccGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACaca                                                                                                                                                                                      >  1:661071/1‑146 (MQ=255)
                                                                                                                                                                                                                        cTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGATATCGCAGGCAAAAGATAGTAATGTAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACATTATCACTGATGGTGCTGATGACATCGTTAAGATGCTCact                                                                                                          >  2:443995/1‑208 (MQ=255)
                                                                                                                                                                                                                                       tCATGCTGTGTATCGGAGGCTCTGGTTTACCATACCGAAAAAGGTAGTTAAGGAAAGTATCAATCGCAGGTAGAAATAATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATAGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTAc                          <  3:16090/275‑1 (MQ=255)
                                                                                                                                                                                                                                              gtaagtggTATGATCTGGTTTCCCATACCGAAAAGGGTAGTGCAGGAAAGTATCAATCGGAGTCAGACACCATGACTAGGTTATCGCAGAAAAAAGATGGTAAGGGAACAAAAGGCGATGTTTTTGTAGGGGAATCGCTGGATGACCTTATCAAAGAGGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAAGATTCAGGTTGCCGGTGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGcac                    <  3:173081/267‑1 (MQ=255)
                                                                                                                                                                                                                                               tATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAACAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGGTTACCTTATCAATGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCATCACTTAACCGGCAAACAATTAAGGTTGCCGATGAGCAAAGATTTTGTTTACTGACGGGGAAAAAGCAATTTACCGGCACaa                  >  3:335085/1‑275 (MQ=255)
                                                                                                                                                                                                                                               tATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGAAGACGCAAGATTTGTTTTAACTGAGGGGAAAAAAAAATTTACCGGCACaa                  >  3:265849/1‑275 (MQ=255)
                                                                                                                                                                                                                                                         gCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCATGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTGTGTAGGGGAATAGCTGGATTACCTTAACACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGGACTTAACCGGCAAAATATTCAGGTTGCCGATGACGCAAGGTTTGTTTGAAATGCGGGGAACAAGAAAGTTACTGGCAAAAAACAGCTTta        >  3:680967/1‑275 (MQ=255)
                                                                                                                                                                                                                                                         gCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCCGCACTTAACCGGCACAATATTCAGGTTGACGATGACGCAAGATTTGTTTTAAATTAGGTGAAAAAGAAATATACAGGCCCAATATCGATTta        >  4:134340/1‑275 (MQ=255)
                                                                                                                                                                                                                                                          ctctGGATTCCCATACCGCAAAGGGTAGTTCAGGAAAGGATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGCTTtac       <  2:317720/275‑1 (MQ=255)
                                                                                                                                                                                                                                                             tGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACATAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACTTCGTTAAGATGCTCCATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGACGACGCACGATTTGTTTTAAATTCGGGGAAAAAGAAATTTCCCGGCACAATATCGCTTtactac    >  3:505913/1‑275 (MQ=255)
                                                                                                                                                                                                                                                             tGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCAAACAATCTCTTtcctac    >  3:185950/1‑275 (MQ=255)
                                                                                                                                                                                                                                                               gTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGCTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGCTTtactacta  >  1:511058/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                              
TGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGCTTTACTACTA  >  NC_000913/3875270‑3875799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: