| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 782739 | 9 (0.800) | 3 (0.270) | 3/260 | NT | 25.1% | coding (655/1044 nt) | nadA | quinolinate synthase, subunit A |
| ? | NC_000913 | = 782765 | 9 (0.810) | coding (681/1044 nt) | nadA | quinolinate synthase, subunit A | |||||
GCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAGGGTGCCTGTATTGTGCATGATGAATTTAAGACTCAGGCGTTAACCCGCTTGCAAGAAGAATACCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCTGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTA > NC_000913/782610‑782887 | gCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAGGGTGCCTGTATTGTGCATGATGAATTTAAGACTCAGGCGTTAACCCGCTTGCAAGAAGAATACTCGGATGCTGCCATACTGGt < 3:61628/149‑1 (MQ=255) cAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAGGGTGCCTGTATTGTGCATGATGAATTTAAGACTCAGGCGTTAACCCGCTTGCAAGAAGAATACCcggatgcaccagtatggcagcatccgg < 1:50399‑M1/149‑28 (MQ=255) gCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAGGGTGCCTGTATTGTGCATGATGAATTTAAGACTCAGGCGTTAACCCGCTTGCAAGAAGAATACCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCg > 4:39073/1‑149 (MQ=255) cTATGCTGGCAGGGTGCCTGTATTGTGCATGATGAATTTAAGACTCAGGCGTTAACCCGCTTGCAAGAAGAATACCTGGATGCACCAGTATGGCAGCATCCGggtattcttcttgcaagcgg > 3:9081‑M2/1‑102 (MQ=255) cTATGCTGGCAGGGTGCCTGTATTGTGCATGATGAATTTAAGACTCAGGCGTTAACCCGCTTGCAAGAAGAATACCTGGATGCACCAGTATGGCAGCATCCGggtattcttcttgcaagcgg < 4:9081‑M2/122‑21 (MQ=255) tGTATTGTGCATGATGAATTTAAGACTCAGGCGTTAACCCGCTTGCAAGAAGAATACCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCgctgc < 2:44008/149‑1 (MQ=255) tgtgCATGATGAATTTAAGACTCAGGCGTTAACCCGCTTGCAAGAAGAATACCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCTGCGa < 3:39073/149‑1 (MQ=255) atgatgAATTTAAGACTCAGGCGTTAACCCGCTTGCAAGAAGAATACCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCTGCGAAAACa > 3:31007/1‑149 (MQ=255) tttAAGACTCAGGCGTTAACCCGCTTGCAAGAAGAATACCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATCTGGCGGATGCGGTCGGTTCCACCAGTCAATTGATCGCTGCTGCGAAAACATTGCcaca > 4:87040/1‑149 (MQ=255) tCAGGCGTTAACCCGCTTGCAAGAAGAATACCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCTGCGAAAACATTGCCACATCAGAGGc > 3:77604/1‑149 (MQ=255) gTTAACCCGCTTACAAGAACAATACCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCTGCGAAAACATTGCCACATCAGAGGCTTATtg < 2:77056/149‑1 (MQ=255) ccGCTTGCAAGAAGAATACCcggatgctgccatactggtgcatccaggtattcttcttgcaagcgggttaacgcctgagtcttaaattcatcatgcacaatacaggcaccctgccagcatag > 3:9081‑M1/1‑20 (MQ=255) ccGCTTGCAAGAAGAATACCcggatgctgccatactggtgcatccaggtattcttcttgcaagcgggttaacgcctgagtcttaaattcatcatgcacaatacaggcaccctgccagcatag < 4:9081‑M1/122‑103 (MQ=255) aagaagAATACCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCTGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCgg > 2:24990/1‑149 (MQ=255) ccGGATGCTGCCATACTGGTGCATCCGggtattcttcttgcaagcgggttaacgcctgagtcttaaattcatcatgcacaatacaggcaccctgccagcatagaatgtctccacccgtctgtttttgcacgtaacgccccagatgtttg < 1:50399‑M2/149‑123 (MQ=255) | GCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAGGGTGCCTGTATTGTGCATGATGAATTTAAGACTCAGGCGTTAACCCGCTTGCAAGAAGAATACCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCTGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTA > NC_000913/782610‑782887 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |