| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 925573 | 10 (0.890) | 3 (0.290) | 4/242 | NT | 23.8% | intergenic (+33/+311) | clpA/serW | ATPase and specificity subunit of ClpA‑ClpP ATP‑dependent serine protease, chaperone activity/tRNA‑Ser |
| ? | NC_000913 | = 925585 | 10 (0.960) | intergenic (+45/+299) | clpA/serW | ATPase and specificity subunit of ClpA‑ClpP ATP‑dependent serine protease, chaperone activity/tRNA‑Ser | |||||
TGTTTGGTTCGCTGGTGGACGGCGGTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAATCTCGAAAGAGGTTACGGACTTTTTGTTTATGGGGTGGAGGAGGTTCAGACCCTTTTTTTAATGATGATGGTAAGTTGTTGATAATTAGTGCTGCGGGAAGGTAAGGATAAAAAAGGGTGCTGCAGGAGAATGGGATGGTTTTGC > NC_000913/925425‑925718 | tgTTTGGTTCGCTGGTGGACGGCGGTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAA > 1:62477‑M1/1‑149 (MQ=255) ggACGGCGGTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGAGTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAAcctctttcgagattac < 2:62477‑M1/149‑17 (MQ=255) gACGGCGGTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAATCTCGAAAGAGGttacg > 3:10375‑M2/1‑144 (MQ=255) ggcggTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTGAAGTCCGTAACCTCTTTCGAGAttacggac > 2:31543‑M2/1‑141 (MQ=255) cggTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAATCTCGAAAGAGGttacggactt > 4:9798‑M2/1‑139 (MQ=255) cggTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAATCTCGAAAGAGGttacggactt > 1:49542‑M2/1‑139 (MQ=255) aggtcaCCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAATCTCGAAAGAGGTTACGGACTTTTTGt < 4:65899/149‑1 (MQ=255) gCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAATCTCGAAAGAGGTTACGGACTTTTTGTTTATGGGGTGGAGGAGGTTCAGACCCTTTTTTTa < 4:3879/149‑1 (MQ=255) cTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAATCTCGAAAGAGGTTACGGACTTTTTGTTTATGGGGTGGAGGAGGTTCAGACCCTTTTTTTaa < 2:58119/149‑1 (MQ=255) aCGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAATCTCGAAAGAGGTTACGGACTTTTTGTTTATGGGGTGGAGGAGGTTCAGACCCTTTTTTTAat > 4:90894/1‑143 (MQ=255) aCGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAATCTCGAAAGAGGTTACGGACTTTTTGTTTATGGGGTGGAGGAGGTTCAGACCCTTTTTTTAat < 3:90894/143‑1 (MQ=255) acaAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAATCTCGAAAGAGGTTACGGACTTTTTGTTTATGGGGTGGAGGAGGTTCAGACCCTTTTTTTAATGATGATGGTAAGTTGTTGATAATTAGtgct > 1:22682/1‑149 (MQ=255) gCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAAcctctttcgagattacgga < 2:62568‑M1/70‑20 (MQ=255) gCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAAcctctttcgagattacgga > 1:62568‑M1/1‑51 (MQ=255) cTGATTGTTAGGTAGGTTGGTCAAGTCCGTAATCTCGAAAGAGGTTACGGACTTTTTGTTTATGGGGTGGAGGAGGTTCAGACCCTTTTTTTAATGATGATGGTAAGTTGTTGATAATTAGTGCTGCGGGAAGGTAAGGATAAAAAAgg < 2:18916/149‑1 (MQ=255) aggtaggtTGGTCAAGTCCGTAATCTCGAAAGAGGTTACGGACTTTTTGTTTATGGGGTGGAGGAGGTTCAGACCCTTTTTTTAATGATGATGGTAAGTTGTTGATAAt < 3:38276/109‑1 (MQ=255) aggtaggtTGGTCAAGTCCGTAATCTCGAAAGAGGTTACGGACTTTTTGTTTATGGGGTGGAGGAGGTTCAGACCCTTTTTTTAATGATGATGGTAAGTTGTTGATAAt > 4:38276/1‑109 (MQ=255) gtaggtTGGTCAAGTCCGTAATCTCGAAAGAGGTTACGGACTTTTTGTATATGGGGTGGAGGAGGTTCAGACCCTTTTTTTAATGATGATGGTAAGGTGTTGATAATTAGTGCTGCGGGAAGGTAAGGATAAAAAAGGGTGCTGCAGga > 4:91014/1‑149 (MQ=255) aaGTCCGTAAcctctttcgagattacggacttgaccaacctacctaacaatcagattaatgcgctgcttccgccttgtgcttttgtgcactctggaatccgtaagtcagctcatttttctctttatccagcgcgacggtgacctgaccg > 1:49542‑M1/1‑10 (MQ=255) aaGTCCGTAAcctctttcgagattacggacttgaccaacctacctaacaatcagattaatgcgctgcttccgccttgtgcttttgtgcactctggaatccgtaagtcagctcatttttctctttatccagcgcgacggtgacctgaccg > 4:9798‑M1/1‑10 (MQ=255) gTCCGTAAtctcgaaagaggttacggacttcaccaacctacctaacaatcagattaatgcgctgcttccgccttgtgcttttgtgcactctggaatccgtaagtcagctcatttttctctttatccagcgcgacggtgacctgaccgcc > 2:31543‑M1/1‑8 (MQ=255) tCCGTAATCTCGAAAGAGGttacggacttgaccaacctacctaacaatcagattaatgcgctgcttccgc < 2:62568‑M2/70‑52 (MQ=255) tCCGTAATCTCGAAAGAGGttacggacttgaccaacctacctaacaatcagattaatgcgctgcttccgc > 1:62568‑M2/1‑19 (MQ=255) cGTAAcctctttcgagattacggacttgaccaacctacctaacaatcagattaatgcgctgcttccgccttgtgcttttgtgcactctggaatccgtaagtcagctcatttttctctttatccagcgcgacggtgacctgaccgccgtc > 3:10375‑M1/1‑5 (MQ=255) cGTAATCTCGAAAGAGGTTACGGACTTTTTGTTTATGGGGTGGAGGAGGTTCAGACCCTTTTTTTAATGATGATGGTAAGTTGTTGATAATTAGTGCTGCGGGAAGGTAAGGATAAAAAAGGGTGCTGCAGGAGAATGGGATGGTTTTg > 1:12969/1‑149 (MQ=255) gTAATCTCGAAAGAGGttacggacttgaccaacctacctaacaatcagattaatgcgctgcttccgccttgtgcttttgtgcactctggaatccgtaactcagctcatttttctctttatccagcgcgacggtgacctgaccgccgtcc < 2:62477‑M2/149‑134 (MQ=255) | TGTTTGGTTCGCTGGTGGACGGCGGTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTTAGGTAGGTTGGTCAAGTCCGTAATCTCGAAAGAGGTTACGGACTTTTTGTTTATGGGGTGGAGGAGGTTCAGACCCTTTTTTTAATGATGATGGTAAGTTGTTGATAATTAGTGCTGCGGGAAGGTAAGGATAAAAAAGGGTGCTGCAGGAGAATGGGATGGTTTTGC > NC_000913/925425‑925718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |