New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1846862 =57 (0.550)4 (0.040) 4/248 NT 6.0% coding (99/1962 nt) topB DNA topoisomerase III
?NC_000913 1846899 = 71 (0.730)coding (62/1962 nt) topB DNA topoisomerase III

TGGCGAACTGGTGCCAGCGCGCGGCGGTCGTGCCATGGTTGAGATTCGTTAATTCAATGCGGTTGTTTATTGCCGAAAAACCGAGTCTGGCGCGCGCCATTGCTGATGTCCTGCCCAAACCGCACCGGAAAGGCGATGGCTTTATCGAGTGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1847016‑1846862
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcggtTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCCGCGCGCTGGCACCAGTTCGCCAATTGCCGTCAGTTCAATGCCAAACTCGGCG  >  NC_000913/1846899‑1847046
                                                                                                                                                                                                                                                                                                               
TGGCGAACTGGTGCCAGCGCGCGGCGGTCGTGCCATGGTTGAGATTCGTTAATTCAATGCGGTTGTTTATTGCCGAAAAACCGAGTCTGGCGCGCGCCATTGCTGATGTCCTGCCCAAACCGCACCGGAAAGGCGATGGCTTTATCGAG                                                                                                                                                            <  2:81117/149‑1
 GGCGAACTGGTGCCAGCGCGCGGCGGTCGTGCCATGGTTGAGATTCGTTAATTCAATGCGGTTGTTTATTGCCGAAAAACCGAGTCTGGCGCGCGCCATTGCTGATGTCCTGCCCAAACCGCACCGGAAAGGCGATGGCTTTATCGAGT                                                                                                                                                           >  4:235112/1‑149
  GCGAACTGGTGCCAGCGCGCGGCGGTCGTGCCATGGTTGAGATTCGTTAATTCAATGCGGTTGTTTATTGCCGAAAAACCGAGTCTGGCGCGCGCCATTGCTGATGTCCTGCCCAAACCGCACCGGAAAGGCGATGGCTTTATCGAGTG                                                                                                                                                          <  3:372829/149‑1
    GAACTGGTGCCAGCGCGCGGCGGTCGTGCCATGGTTGAGATTCGTTAATTCAATGCGGTTGTTTATTGCCGAAAAACCGAGTCTGGCGCGCGCCATTGCTGATGTCCTGCCCAAACCGCACCGGAAAGGCGATGGCTTTATCGAGTGCG                                                                                                                                                        <  1:227403/149‑1
    GAACTGGTGCCAGCGCGCGGCGGTCGTGCCATGGTTGAGATTCGTTAATTCAATGCGGTTGTTTATTGCCGAAAAACCGAGTCTGGCGCGCGCCATTGCTGATGTCCTGCCCAAACCGCACCGGAAAGGCGATGGCTTTATCGAGTGCG                                                                                                                                                        <  2:785672/149‑1
     AACTGGTGCCAGCGCGCGGCGGTCGTGCCATGGTTGAGATTCGTTAATTCAATGCGGTTGTTTATTGCCGAAAAACCGAGTCTGGCGCGCGCCATTGCTGATGTCCTGCCCAAACCGCACCGGAAAGGCGATGGCTTTATCGAGTGCGG                                                                                                                                                       <  4:242656/149‑1
                                                                                                                 CCCAAACCGCACCGGAAAGGCGATGGCTTTATCGAGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCCGCGCGCTGGCA                                           >  4:30086/1‑149
                                                                                                                  CCAAACCGCACCGGAAAGGCGATGGCTTTATCGAGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCCGCGCGCTGGCAC                                          >  1:227588/1‑149
                                                                                                                   CAAACCGCACCGGAAAGGCGATGGCTTTATCGAGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCCGCGCGCT                                               >  3:354896/1‑143
                                                                                                                   CAAACCGCACCGGAAAGGCGATGGCTTTATCGAGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCCGCGCGCT                                               <  4:354896/143‑1
                                                                                                                                                    GTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCCGCGCGCTGGCACCAGTTCGCCAATTGCCGTCAGTTCAATGCCAAAC        <  1:811246/149‑1
                                                                                                                                                     TGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCCGCGCGCTGGCACCAGTTCGCCAATTGCCGTCAGTTCAATGCCAAACT       >  1:821311/1‑149
                                                                                                                                                        GGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCCGCGCGCTGGCACCAGTTCGCCAATTGCCGTCAGTTCAATGCCAAACTCGG    <  4:358922/149‑1
                                                                                                                                                         GTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCCGCGCGCTGGCACCAGTTCGCCAATTGCCGTCAGTTCAATGCCAAACTCGGC   <  4:229709/149‑1
                                                                                                                                                          TTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCCGCGCGCTGGCGCCAGTTCGCCAATTGCCGTCAGTTCAATGCCAAACTCGGCG  >  4:754972/1‑149
                                                                                                                                                                                                                                                                                                               
TGGCGAACTGGTGCCAGCGCGCGGCGGTCGTGCCATGGTTGAGATTCGTTAATTCAATGCGGTTGTTTATTGCCGAAAAACCGAGTCTGGCGCGCGCCATTGCTGATGTCCTGCCCAAACCGCACCGGAAAGGCGATGGCTTTATCGAGTGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1847016‑1846862
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcggtTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCCGCGCGCTGGCACCAGTTCGCCAATTGCCGTCAGTTCAATGCCAAACTCGGCG  >  NC_000913/1846899‑1847046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.