New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1040547 =NA (NA)6 (0.060) 6/242 NT NA noncoding (5/36 nt) REP89 (repetitive extragenic palindromic) element; contains 1 REP sequences REP89 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 1040579 = NA (NA)intergenic (+42/‑38) cbdX/appA putative cytochrome bd‑II oxidase subunit/phosphoanhydride phosphorylase

Only 100 of 134 total aligned reads displayed.

AAGGAGCAGAAACAATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAGTGTGGTGATTGTCAGT  >  NC_000913/1040431‑1040727
                                                                                                                                                    |                                                                                                                                                    
aaGGAGCAGAAACAATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGca                                                                                                                                                      >  4:860923/1‑149 (MQ=255)
 aGGAGCAGAAACAATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGcaa                                                                                                                                                     <  1:611946/149‑1 (MQ=255)
   gAGCAGAAACAATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGcaatc                                                                                                                                                   >  4:65638/1‑149 (MQ=255)
      cAGAAACAATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGCTGCGGCGCATTAGCATCGCATCAGGcaatcaat                                                                                                                                                >  2:871241/1‑149 (MQ=255)
        gAAACAATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCaataa                                                                                                                                              <  4:1925/149‑1 (MQ=255)
        gAAACAATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCaataa                                                                                                                                              >  3:147624/1‑149 (MQ=255)
           aCAATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGt                                                                                                                                           <  3:99454/149‑1 (MQ=255)
            cAATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTc                                                                                                                                          <  4:89687/149‑1 (MQ=255)
               tgtgGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGa                                                                                                                                       <  1:172022/149‑1 (MQ=255)
               tgtgGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGa                                                                                                                                       <  4:289968/149‑1 (MQ=255)
               tgtgGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGa                                                                                                                                       <  4:229165/149‑1 (MQ=255)
               tgtgGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGa                                                                                                                                       <  3:457147/149‑1 (MQ=255)
                 tgGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGata                                                                                                                                     <  3:355908/149‑1 (MQ=255)
                   gTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATg                                                                                                                                   >  3:227920/1‑149 (MQ=255)
                      tttACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGaaa                                                                                                                                >  2:204461/1‑149 (MQ=255)
                         aCTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGc                                                                                                                             <  2:210160/149‑1 (MQ=255)
                          cTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCg                                                                                                                            <  1:626051/149‑1 (MQ=255)
                           tttGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGa                                                                                                                                       >  2:688167/1‑137 (MQ=255)
                            ttGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGa                                                                                                                          <  1:97483/149‑1 (MQ=255)
                              ggTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGaaa                                                                                                                        <  2:934861/149‑1 (MQ=255)
                               gTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAAc                                                                                                                       >  2:686910/1‑149 (MQ=255)
                                  cgtcgGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACata                                                                                                                    <  2:470182/149‑1 (MQ=255)
                                    tcgGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATc                                                                                                                  <  4:309698/149‑1 (MQ=255)
                                       gCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGAt                                                                                                               <  3:749078/149‑1 (MQ=255)
                                          ttttGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGaa                                                                                                            <  3:376327/149‑1 (MQ=255)
                                           tttGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGaaa                                                                                                           <  3:786220/149‑1 (MQ=255)
                                           tttGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGaaa                                                                                                           <  2:135809/149‑1 (MQ=255)
                                           tttGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGaaa                                                                                                           <  2:258761/149‑1 (MQ=255)
                                           tttGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATAGATGaaa                                                                                                           <  2:502927/149‑1 (MQ=255)
                                                tgATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGAt                                                                                                      <  4:693245/149‑1 (MQ=255)
                                                tgATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGAt                                                                                                      <  1:461506/149‑1 (MQ=255)
                                                      gtTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAAt                                                                                                <  4:147624/149‑1 (MQ=255)
                                                       ttCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATc                                                                                               >  1:172612/1‑149 (MQ=255)
                                                         cGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATccc                                                                                             >  4:124039/1‑149 (MQ=255)
                                                              tcCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCAtttt                                                                                        >  2:569052/1‑149 (MQ=255)
                                                                cACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTa                                                                                      <  4:582278/149‑1 (MQ=255)
                                                                  gatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTc                                                                                                                                          <  2:420360‑M1/45‑1 (MQ=255)
                                                                   ccTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTAtct                                                                                   >  2:753346/1‑149 (MQ=255)
                                                                   ccTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGGCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTAtct                                                                                   >  1:704697/1‑149 (MQ=255)
                                                                    cTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAAc                                                                                                                       >  2:435843/1‑112 (MQ=255)
                                                                    cTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAAc                                                                                                                       <  1:435843/112‑1 (MQ=255)
                                                                     ttGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTGATCCCAttttt                                                                                       <  3:740043/143‑1 (MQ=255)
                                                                     ttGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATctct                                                                                 >  1:45368/1‑149 (MQ=255)
                                                                       gtgtTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCtcttc                                                                               <  3:284965/149‑1 (MQ=255)
                                                                          ttGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCtcttc                                                                               >  3:304422/1‑146 (MQ=255)
                                                                          ttGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGa                                                                            <  1:494721/149‑1 (MQ=255)
                                                                          ttGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGa                                                                            <  4:202335/149‑1 (MQ=255)
                                                                            ggTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGAtt                                                                          <  2:190919/149‑1 (MQ=255)
                                                                             gTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTc                                                                         >  4:342129/1‑149 (MQ=255)
                                                                               aTGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCTTCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCg                                                                       <  3:332149/149‑1 (MQ=255)
                                                                               aTGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCg                                                                       >  2:874280/1‑149 (MQ=255)
                                                                                    tGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAAc                                                                  >  4:53983/1‑149 (MQ=255)
                                                                                      gACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGaaa                                                                                                                        <  2:294704/93‑1 (MQ=255)
                                                                                      gACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGaaa                                                                                                                        >  1:294704/1‑93 (MQ=255)
                                                                                         ccGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAAt                                                                                                >  3:557727/1‑114 (MQ=255)
                                                                                         ccGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCAGTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAAt                                                                                                <  4:557727/114‑1 (MQ=255)
                                                                                                tGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGc                                                      <  1:727661/149‑1 (MQ=255)
                                                                                                tGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGc                                                      <  3:124039/149‑1 (MQ=255)
                                                                                                 gAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAg                                                                                                                              <  4:291437/76‑1 (MQ=255)
                                                                                                 gAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCa                                                     >  4:428207/1‑149 (MQ=255)
                                                                                                  aaaaGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCAt                                                    >  1:544960/1‑149 (MQ=255)
                                                                                                  aaaaGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCAt                                                    <  3:313523/149‑1 (MQ=255)
                                                                                                   aaaGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCAtt                                                   <  2:488178/149‑1 (MQ=255)
                                                                                                     aGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCg                                                 >  3:268115/1‑149 (MQ=255)
                                                                                                     aGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCg                                                 >  3:100221/1‑149 (MQ=255)
                                                                                                      gTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGc                                                >  3:694377/1‑149 (MQ=255)
                                                                                                       ttAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCt                                               >  2:788548/1‑149 (MQ=255)
                                                                                                       gacattattgattgcctgatgcgatgctaatgcgccgcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATc                                                                                                     <  2:420360‑M2/50‑1 (MQ=255)
                                                                                                       gacattattgattGCCTGATGCGATGCTAATGCGCCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATc                                                                                                     <  1:420360‑M1/82‑1 (MQ=255)
                                                                                                          acgaacgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCag                                            >  1:561904/1‑149 (MQ=255)
                                                                                                          acgaacgTAGGCCTGATGCGGCGCATTAGAATCCCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATACCTTCTGCTTCCGTTACATCCGCAATCTGCATTCGCACag                                            >  2:798022/1‑149 (MQ=255)
                                                                                                           ttattgattgcctgatgcgatgctaatgcgccgcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCCATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCaga                                           >  4:666200‑M2/42‑149 (MQ=255)
                                                                                                              acgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTg                                        <  4:628281/149‑1 (MQ=255)
                                                                                                                gTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAg                                      >  3:312269/1‑149 (MQ=255)
                                                                                                                  gatgctaaTGCGCCGCATCAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATACCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGcc                                    >  3:42783/8‑149 (MQ=255)
                                                                                                                  aGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAAcccc                                                               >  4:692053/1‑122 (MQ=255)
                                                                                                                  aGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAAcccc                                                               <  3:692053/122‑1 (MQ=255)
                                                                                                                       TGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGc                               <  1:380491‑M1/149‑1 (MQ=255)
                                                                                                                       TGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGc                               <  1:907814‑M1/149‑1 (MQ=255)
                                                                                                                        gatgcgatgctaatgcgccgcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCt                                                                                                    >  3:544897‑M2/29‑79 (MQ=255)
                                                                                                                        gatgcgatgctaatgcgccgcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCt                                                                                                    <  4:544897‑M2/51‑1 (MQ=255)
                                                                                                                             GGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGc                         >  3:860923‑M1/1‑149 (MQ=255)
                                                                                                                              atgctaatgcgccgcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCt                        <  3:666200‑M2/127‑1 (MQ=255)
                                                                                                                               cgcATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTg                       <  2:561904/149‑1 (MQ=255)
                                                                                                                                gcATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTgg                      >  3:648946/1‑149 (MQ=255)
                                                                                                                                   ttAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGaaa                   >  2:860421/1‑149 (MQ=255)
                                                                                                                                   ttAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGaaa                   >  2:298875/1‑149 (MQ=255)
                                                                                                                                   ttAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGaaa                   <  1:380098/149‑1 (MQ=255)
                                                                                                                                     aGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAgt                 >  4:303497/1‑149 (MQ=255)
                                                                                                                                      gcatcgcatcAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAgtg                <  4:227920/149‑1 (MQ=255)
                                                                                                                                      gcatcgcatcAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAgtg                <  1:282612/149‑1 (MQ=255)
                                                                                                                                        atcgcatcAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGATCTGAAGCTGGAAAGtgtg              >  1:590952/1‑149 (MQ=255)
                                                                                                                                        atcgcatcAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAGtgtg              >  1:764366/1‑149 (MQ=255)
                                                                                                                                        atcgcatcAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAGtgtg              <  3:196981/149‑1 (MQ=255)
                                                                                                                                            catcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAGTGTGGTGa          >  1:286847‑M2/9‑149 (MQ=255)
                                                                                                                                              tcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAGTGTGGTGAtt        <  2:489955‑M2/143‑1 (MQ=255)
                                                                                                                                                aggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAGTGTGGTGATTGt      >  4:145637‑M2/5‑149 (MQ=255)
                                                                                                                                                 ggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAGTGTGGTGATTGTc     >  2:724494‑M2/4‑149 (MQ=255)
                                                                                                                                                  gcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAGTGTGGTGATTGTCa    >  3:447232‑M2/3‑149 (MQ=255)
                                                                                                                                                   cAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAGTGTGGTGATTGTCAg   >  1:130425‑M2/2‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
AAGGAGCAGAAACAATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAGTGTGGTGATTGTCAGT  >  NC_000913/1040431‑1040727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.