| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,302,295 | G→T | 100% | I153I (ATC→ATA) | napA ← | nitrate reductase, periplasmic, large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,302,295 | 0 | G | T | 100.0% | 367.9 / NA | 99 | I153I (ATC→ATA) | napA | nitrate reductase, periplasmic, large subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (48/51); total (48/51) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 101 total aligned reads displayed.
CGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCAGATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCATATTTACCG > NC_000913/2302150‑2302436 | cgtcATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCAtata < 1:654914/149‑1 (MQ=255)cgtcATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCAtata < 1:909083/149‑1 (MQ=255) gtcATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAg > 2:692435/1‑149 (MQ=255) gcagcCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACt < 3:657505/149‑1 (MQ=255) agcCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGa < 2:66886/149‑1 (MQ=255) gcCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGAc < 1:395893/149‑1 (MQ=255) aTCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGa > 1:811887/1‑149 (MQ=255) tCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGAc < 1:741852/139‑1 (MQ=255) tCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGAc > 2:741852/1‑139 (MQ=255) tCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGaa > 4:446924/1‑149 (MQ=255) tCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGaa > 1:347524/1‑149 (MQ=255) aTCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGACGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACt < 2:278078/134‑1 (MQ=255) aTCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACt > 1:278078/1‑134 (MQ=255) aTCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACa > 1:353024/1‑149 (MQ=255) tCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACAt > 2:356978/1‑149 (MQ=255) cATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATAc > 1:301730/1‑149 (MQ=255) cAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACcgatc < 1:58378/149‑1 (MQ=255) cAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACcgatc > 3:774005/1‑149 (MQ=255) cGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCgg < 1:6851/149‑1 (MQ=255) gCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCTATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATAGAGGCCACTTACCAGAACCGAACATACCGACCGATTCCGGc > 4:511472/1‑149 (MQ=255) gCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGc < 4:17389/149‑1 (MQ=255) aTAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGccc > 3:695629/1‑149 (MQ=255) tAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCt > 3:500750/1‑149 (MQ=255) aaGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCttt > 3:688352/1‑149 (MQ=255) aGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCtttt > 2:459064/1‑149 (MQ=255) gCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCttttt < 1:90921/149‑1 (MQ=255) gCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCttttt < 4:411092/149‑1 (MQ=255) ccAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTtttc > 2:627525/1‑149 (MQ=255) ccAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTtttc < 1:927498/149‑1 (MQ=255) aaCTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTtttctt > 4:825253/1‑149 (MQ=255) aaCTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTtttctt > 1:700493/1‑149 (MQ=255) aaCTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTtttctt > 1:619256/1‑149 (MQ=255) tactGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCa < 1:597398/149‑1 (MQ=255) tactGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCa < 3:66955/149‑1 (MQ=255) gCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGc < 3:840354/149‑1 (MQ=255) cGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGttt < 3:825253/149‑1 (MQ=255) ccATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTg > 3:199517/1‑149 (MQ=255) cATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCCGCCCTTTTTCTTTCAGGGCGGTTTTGa < 4:832525/149‑1 (MQ=255) aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGtttt > 2:570948/1‑146 (MQ=255) aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGtttt < 1:570948/146‑1 (MQ=255) aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa < 2:783709/149‑1 (MQ=255) aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa > 1:831781/1‑149 (MQ=255) aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa < 2:353024/149‑1 (MQ=255) aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa < 1:125034/149‑1 (MQ=255) aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa < 1:3003/149‑1 (MQ=255) aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa < 1:356978/149‑1 (MQ=255) aTACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa < 4:688352/149‑1 (MQ=255) tACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAAt < 4:758003/149‑1 (MQ=255) cAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAAttt < 2:126266/149‑1 (MQ=255) aGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTtc < 1:692435/149‑1 (MQ=255) gTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTtct < 3:17427/149‑1 (MQ=255) gcgTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCAt > 3:562878/1‑149 (MQ=255) tCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATcaca > 3:154442/1‑149 (MQ=255) cGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAg < 2:537177/149‑1 (MQ=255) cGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAg < 1:839521/149‑1 (MQ=255) gATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAgg > 1:111055/1‑149 (MQ=255) gATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTATTCTTTCAGGGAGGTTTTGAATTTCTCTTCCATCACATCGAAgg > 2:815006/1‑149 (MQ=255) tgttgtTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGcc < 2:674838/149‑1 (MQ=255) gttgttCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCt > 3:496120/1‑149 (MQ=255) gttCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGAt > 4:337500/1‑149 (MQ=255) ttCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATc > 1:377944/1‑149 (MQ=255) gAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa > 1:315253/1‑116 (MQ=255) gAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGaa < 2:315253/116‑1 (MQ=255) gAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCa < 2:227367/149‑1 (MQ=255) aCGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAgg > 1:11168/1‑149 (MQ=255) ggAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTg < 1:248007/149‑1 (MQ=255) cccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAg < 4:323014/141‑1 (MQ=255) cccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAg > 3:323014/1‑141 (MQ=255) cccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTgg < 1:459064/149‑1 (MQ=255) ccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGaa < 4:564116/56‑1 (MQ=255) ccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGaa > 3:564116/1‑56 (MQ=255) ccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTggg < 2:111055/149‑1 (MQ=255) ccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTggg > 1:809451/1‑149 (MQ=255) ccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTggg < 2:811887/149‑1 (MQ=255) ccGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTggg > 4:583723/1‑149 (MQ=255) cGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTgggg < 2:482255/149‑1 (MQ=255) gCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGt > 1:402298/1‑149 (MQ=255) gCTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGt > 1:226788/1‑149 (MQ=255) cTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCg > 1:517611/1‑122 (MQ=255) cTTTAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCg < 2:517611/122‑1 (MQ=255) ttAAACAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTaaa < 3:822140/149‑1 (MQ=255) aaCAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTggg < 2:532412/141‑1 (MQ=255) aaCAGCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTggg > 1:532412/1‑141 (MQ=255) gCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCtttt < 4:172881/74‑1 (MQ=255) gCTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCtttt > 3:172881/1‑74 (MQ=255) cTTGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCctt < 1:656976/149‑1 (MQ=255) ttGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCcttc > 4:254415/1‑149 (MQ=255) ttGGACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCcttc > 2:227244/1‑149 (MQ=255) gACGCGGCATAACCTTCCCATATAGTCCACTGACCAGAGCCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCttt < 1:284742/149‑1 (MQ=255) aCGCGGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTg < 3:254415/149‑1 (MQ=255) cgcgGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGt < 2:831781/149‑1 (MQ=255) gcgGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAg > 1:390098/1‑108 (MQ=255) gcgGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAg < 2:390098/108‑1 (MQ=255) cgGCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCa < 4:562878/149‑1 (MQ=255) gCATAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCata < 3:90540/149‑1 (MQ=255) aTAACCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCATAtt > 4:110957/1‑149 (MQ=255) aaCCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCATATTTa > 2:175550/1‑149 (MQ=255) aCCTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCATATTTAc < 2:619256/149‑1 (MQ=255) cTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCATATTTACCg > 3:590695/1‑149 (MQ=255) cTTCCCATATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCATATTTACCg > 4:852399/1‑149 (MQ=255) | CGTCATAGCAGCCCATCGGCTCATCCATACCAAAGGTACGCATAAAGCCAACTACTGCCGACGCCATACAGTGACGCGCGTTCGGGTCGATGTTGTTCGAACGGAAGCCCGCTTTAAACAGCTTGGACGCGGCATAACCTTCCCAGATAGTCCACTGACCAGAACCGAACATACCGATCGATTCCGGCCCTTTTTCTTTCAGGGCGGTTTTGAATTTCTCTTCCATCACATCGAAGGCCTGATCCCAGGTGATTGGGGTAAATTCGCCTTCTTTGTCATATTTACCG > NC_000913/2302150‑2302436 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |