| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,474,031 | C→G | 6.1% | K17N (AAG→AAC) | rpsG ← | 30S ribosomal subunit protein S7 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,474,031 | 0 | C | G | 6.1% | 445.8 / 13.6 | 128 | K17N (AAG→AAC) | rpsG | 30S ribosomal subunit protein S7 |
| Reads supporting (aligned to +/- strand): ref base C (58/61); new base G (3/5); total (62/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
GCTACTTCGAATGCTTCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACC > NC_000913/3473888‑3474176 | gCTACTTCGAATGCTTCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCgg < 3:605641/149‑1 (MQ=255) ttCGAATGCTTCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCg > 1:667448/1‑149 (MQ=255) ttCGAATGCTTCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCg > 3:613855/1‑149 (MQ=255) tCGAATGCTTCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCgg < 4:101542/149‑1 (MQ=255) cGAATGCTTCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAAGTTCGGATcagaa < 1:931265/149‑5 (MQ=255) cGAATGCTTCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAAGTTCGGATcagaa < 3:221844/149‑5 (MQ=255) gAATGCTTCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCa > 4:784782/1‑149 (MQ=255) gAATGCTTCCAGTTCAGATTTACCAGAGCGCTGAGACAGGGTCTCCAGCGAGCTGTTTACGATAGATTCAGCAGTAGATATTTTGCCGTCTCCCATCAGGATATTTACAAATTTAGCCAGCAGCTCTGATCCGAAGTTCAGATCCGGCa < 2:101277/149‑1 (MQ=255) aaTGCTTCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAg > 3:437920/1‑149 (MQ=255) aaTGCTTCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAg > 4:359084/1‑149 (MQ=255) gCTTCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAAt < 1:275012/149‑1 (MQ=255) cTTCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAAtt < 1:148126/149‑1 (MQ=255) ttCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAAttt > 1:264173/1‑149 (MQ=255) ttCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAAttt > 4:224868/1‑149 (MQ=255) ttCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAAttt > 2:914225/1‑149 (MQ=255) ttCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAAttt > 1:163095/1‑149 (MQ=255) cAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTAc > 3:750533/1‑149 (MQ=255) cAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTAc > 2:258861/1‑149 (MQ=255) aGTTCAGATTTACCAGAGCGCTGACCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAGATTTAGCCAGCAGTTCTGATCCGAAATTCGGATCCGGCAGAATTTTACg > 3:578478/1‑149 (MQ=255) ttCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCt > 3:463935/1‑149 (MQ=255) cAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGa < 4:834957/149‑1 (MQ=255) gATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGAcc > 1:89245/1‑149 (MQ=255) aTTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCGGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCATCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCa > 3:79215/1‑149 (MQ=255) aTTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGAt < 3:734079/126‑1 (MQ=255) aTTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCa > 1:85488/1‑149 (MQ=255) ccAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGAc < 1:698511/149‑1 (MQ=255) agagCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTCCCATCTACCATCAGGATATTTACAATTTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCCATGAcgc < 4:216977/149‑1 (MQ=255) gagCGCTGAGCCAGGGTCTCCAGCGCGCCGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGAcgcg > 3:729906/1‑149 (MQ=255) gAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGt < 4:505476/149‑1 (MQ=255) gCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACTATCAGGATATTGACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTgg < 2:667448/149‑1 (MQ=255) gCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTgg > 4:757935/1‑149 (MQ=255) cAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCa > 3:557138/1‑149 (MQ=255) aGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCAt > 2:712338/1‑149 (MQ=255) ctcCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGaaa < 1:112545/149‑1 (MQ=255) tcCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAAt > 2:488493/1‑149 (MQ=255) tcCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAAt > 1:551184/1‑149 (MQ=255) tcCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACAATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGCAAt > 4:743596/1‑149 (MQ=255) cAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATAc > 1:518499/1‑149 (MQ=255) aGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACt < 1:856948/149‑1 (MQ=255) cgcgcTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTcc < 2:551184/149‑1 (MQ=255) gcTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCATCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCgtt < 4:548575/149‑1 (MQ=255) gcTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCgtt < 2:89245/149‑1 (MQ=255) tGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCgttgt > 2:820576/1‑149 (MQ=255) tataCGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTa > 1:464400/1‑149 (MQ=255) ataCGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTaa < 3:784782/149‑1 (MQ=255) gATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGCTCCGAAGTTCGGATcaga > 3:371976/1‑84 (MQ=255) gATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAAGtt > 2:558069/1‑78 (MQ=255) gATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAAGtt < 1:558069/78‑1 (MQ=255) gATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAAGTTCGGATcaga < 4:371976/87‑4 (MQ=255) aTTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAg > 2:80646/1‑145 (MQ=255) aTTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAg < 1:80646/145‑1 (MQ=255) aTTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGAtt < 4:231952/149‑1 (MQ=255) aTTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGAtt < 4:24926/149‑1 (MQ=255) cagcagTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCAGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTc < 3:875389/149‑1 (MQ=255) agcagTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCa > 2:424399/1‑140 (MQ=255) agcagTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCa < 1:424399/140‑1 (MQ=255) gTAGATTTTTTACCATCTACCATCAGTATATTTACAAATTAAGCAATCAGTTCTAATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGCCGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCaaaa < 2:226687/149‑1 (MQ=255) gTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCaaaa < 2:246300/149‑1 (MQ=255) tAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTc < 3:536904/134‑1 (MQ=255) tAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTc > 4:536904/1‑134 (MQ=255) aGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAAct > 4:66970/1‑149 (MQ=255) gATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGACATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAACctc < 2:128372/149‑1 (MQ=255) ttttttACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTTATTCAGGATTGTCCAAAACTCTa > 4:432632/1‑149 (MQ=255) tttACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGa < 4:701567/149‑1 (MQ=255) catctaccatcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGagttta < 4:79215/149‑1 (MQ=255) catctaccatcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGagtt < 1:654406/147‑1 (MQ=255) catctaccatcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTACAAAACTCTACGagttta > 3:640126/1‑149 (MQ=255) tctaccatcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGagtttagt > 1:106032/1‑149 (MQ=255) accatcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTg > 3:219933/1‑149 (MQ=255) ccatcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGa > 4:383956/1‑149 (MQ=255) atcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACa > 4:528171/1‑149 (MQ=255) tcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGa > 3:320744/1‑68 (MQ=255) tcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGa < 4:320744/68‑1 (MQ=255) tcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTc < 3:382278/101‑1 (MQ=255) tcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTc > 4:382278/1‑101 (MQ=255) ggATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTa > 1:139600/1‑149 (MQ=255) aCAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTaaaa < 1:914225/149‑1 (MQ=255) aCAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGAGCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTaaaa > 4:874539/1‑149 (MQ=255) tttAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGttt < 3:770235/149‑1 (MQ=255) tttAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGttt < 4:862828/149‑1 (MQ=255) tttAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGttt > 1:118362/1‑149 (MQ=255) tttAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGttt < 4:729906/149‑1 (MQ=255) tttAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGttt < 2:839542/149‑1 (MQ=255) tAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTgg < 3:517984/149‑1 (MQ=255) tAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTgg < 2:461908/149‑1 (MQ=255) aGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGc > 1:45583/1‑149 (MQ=255) ccAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCct > 1:223268/1‑149 (MQ=255) cagcagTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCctt > 1:409511/1‑149 (MQ=255) agcagTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCctta < 1:12318/149‑1 (MQ=255) gcagTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCcttac < 3:823713/149‑1 (MQ=255) cTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAg > 1:826317/1‑85 (MQ=255) cTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAg < 2:826317/85‑1 (MQ=255) cTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACg < 2:518499/149‑1 (MQ=255) tGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACgg > 2:461357/1‑149 (MQ=255) aTCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGgag > 3:901079/1‑149 (MQ=255) tCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCctt > 4:164470/1‑137 (MQ=255) tCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCctt < 3:164470/137‑1 (MQ=255) ccGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGaa < 3:285531/149‑1 (MQ=255) gAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAAcc > 1:259559/1‑149 (MQ=255) gAACTTCAGATCCGGCAGAATTTTACGCTGACCAATGACGCTACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTACTAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAGACGTTTGGCCTTACTTAACGGAGAAcc < 2:671476/149‑1 (MQ=255) | GCTACTTCGAATGCTTCCAGTTCAGATTTACCAGAGCGCTGAGCCAGGGTCTCCAGCGCGCTGTATACGATAGATTCAGCAGTAGATTTTTTACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACC > NC_000913/3473888‑3474176 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |