Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,489,234 T→C 6.2% Q316R (CAG→CGG) ‡ argD ← bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,489,2340TC 6.2% 370.7 / 9.9 113Q316R (CAG→CGG) ‡argDbifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase
Reads supporting (aligned to +/- strand):  ref base T (45/61);  new base C (3/4);  total (48/65)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.68e-01

Only 100 of 114 total aligned reads displayed.

AGCCTCTGCGCCCGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAG  >  NC_000913/3489089‑3489382
                                                                                                                                                 |                                                                                                                                                    
aGCCTCTGCGCCCGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGc                                                                                                                                                   >  1:852843/1‑149 (MQ=255)
aGCCTCTGCGCCCGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGc                                                                                                                                                   <  1:443296/149‑1 (MQ=255)
   ctctGCGCCCGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGtt                                                                                                                                                >  3:220314/1‑149 (MQ=255)
       gcgcCCGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGc                                                                                                                                            <  3:414437/149‑1 (MQ=255)
        cgcCCGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCCAGCGttttgtt                                                                                                                                           <  4:508627/149‑5 (MQ=255)
          cccGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTGCTGCAGATGGTCAACAAAACGCCAGCGttttgttga                                                                                                                                         <  4:26570/149‑7 (MQ=255)
           ccGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGa                                                                                                                                        >  1:876238/1‑149 (MQ=255)
           ccGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGa                                                                                                                                        >  1:775635/1‑149 (MQ=255)
           ccGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCCAGCGttttgttga                                                                                                                                         <  2:602492/148‑7 (MQ=255)
           ccGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCCAGCGttttgttga                                                                                                                                         >  1:415882/1‑142 (MQ=255)
           ccGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCCAGCGttttgttga                                                                                                                                         <  2:415882/148‑7 (MQ=255)
           ccGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCCAGCGttttgttga                                                                                                                                         >  1:602492/1‑142 (MQ=255)
            cGCATACAGGAAATCACGCGCCCTACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGaa                                                                                                                                       <  1:838721/149‑1 (MQ=255)
            cGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGaa                                                                                                                                       <  4:169862/149‑1 (MQ=255)
                tACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGcc                                                                                                                                   <  1:491072/149‑1 (MQ=255)
                 aCAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCt                                                                                                                                  <  4:412600/149‑1 (MQ=255)
                  cAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTTCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTCGCGTTTCGCCTGAATGCCtt                                                                                                                                 <  1:744500/149‑1 (MQ=255)
                   aGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATTTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGaa                                                                                                                                       <  4:535754/142‑1 (MQ=255)
                   aGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGaa                                                                                                                                       >  3:535754/1‑142 (MQ=255)
                   aGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTc                                                                                                                                >  2:186799/1‑149 (MQ=255)
                     gAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCa                                                                                                                              <  3:507944/149‑1 (MQ=255)
                               gcCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAATCGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAgg                                                                                                                    <  2:176705/149‑1 (MQ=255)
                               gcCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAgg                                                                                                                    <  3:787969/149‑1 (MQ=255)
                               gcCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAgg                                                                                                                    <  1:81278/149‑1 (MQ=255)
                                cccGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAggg                                                                                                                   <  4:284496/149‑1 (MQ=255)
                                cccGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAggg                                                                                                                   <  1:167332/149‑1 (MQ=255)
                                cccGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAggg                                                                                                                   <  3:348821/149‑1 (MQ=255)
                                         tGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATtgatg                                                                                                          <  2:781887/149‑1 (MQ=255)
                                          gTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATtgatga                                                                                                         <  4:135493/149‑1 (MQ=255)
                                          gTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATtgatga                                                                                                         <  1:768524/149‑1 (MQ=255)
                                            aCTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGata                                                                                                       <  4:71491/149‑1 (MQ=255)
                                              tgtgGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATc                                                                                                     >  3:496217/1‑149 (MQ=255)
                                              tgtgGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATc                                                                                                     >  3:416729/1‑149 (MQ=255)
                                              tgtgGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATc                                                                                                     >  3:7393/1‑149 (MQ=255)
                                               gtgGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCa                                                                                                    >  1:162635/1‑149 (MQ=255)
                                                 ggTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCaaa                                                                                                  <  4:496217/149‑1 (MQ=255)
                                                   tttCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGc                                                                                                                                            <  1:401147/105‑1 (MQ=255)
                                                   tttCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAAcg                                                                                                >  3:602088/1‑149 (MQ=255)
                                                       aGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAAcgccgc                                                                                            <  2:495788/149‑1 (MQ=255)
                                                       aGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAAcgccgc                                                                                            <  3:635941/149‑1 (MQ=255)
                                                          tctGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATtgat                                                                                                           <  2:835/131‑1 (MQ=255)
                                                              cgcCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCt                                                                                     >  2:157989/1‑149 (MQ=255)
                                                                 cAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACt                                                                                  >  4:692010/1‑149 (MQ=255)
                                                                  aaTCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAAt                                                                                                                                      >  1:551867/1‑96 (MQ=255)
                                                                  aaTCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAAt                                                                                                                                      <  2:551867/96‑1 (MQ=255)
                                                                  aaTCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTg                                                                                 >  2:212272/1‑149 (MQ=255)
                                                                   aTCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGc                                                                                >  1:289659/1‑149 (MQ=255)
                                                                   aTCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGc                                                                                >  1:289658/1‑149 (MQ=255)
                                                                     cAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGcac                                                                              <  1:595948/149‑1 (MQ=255)
                                                                        cAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAACGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAgg                                                                           <  4:536585/149‑1 (MQ=255)
                                                                         aGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGc                                                                          >  2:186828/1‑149 (MQ=255)
                                                                         aGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGc                                                                          >  4:830143/1‑149 (MQ=255)
                                                                            cccATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCag                                                                       >  2:641514/1‑149 (MQ=255)
                                                                             ccATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCaga                                                                      <  1:476926/149‑1 (MQ=255)
                                                                              cATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCagag                                                                     <  1:787166/149‑1 (MQ=255)
                                                                              cATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCagag                                                                     <  1:902663/149‑1 (MQ=255)
                                                                              cATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCagag                                                                     <  1:741089/149‑1 (MQ=255)
                                                                               aTACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAgg                                                                    >  1:342123/1‑149 (MQ=255)
                                                                                 aCCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGAt                                                                  <  2:775635/149‑1 (MQ=255)
                                                                                  ccGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGAtt                                                                 >  4:860501/1‑149 (MQ=255)
                                                                                    gcgAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTAc                                                               <  1:157989/149‑1 (MQ=255)
                                                                                    gcgAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTAc                                                               >  3:84674/1‑149 (MQ=255)
                                                                                       aaTATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTAccgc                                                            >  4:327608/1‑149 (MQ=255)
                                                                                           tCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTa                                                        >  3:181726/1‑149 (MQ=255)
                                                                                               tAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTg                                                    <  2:876238/149‑1 (MQ=255)
                                                                                                   tACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAAc                                                >  3:885611/1‑149 (MQ=255)
                                                                                                      aTCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGt                                             >  2:710867/1‑149 (MQ=255)
                                                                                                           aCTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGaa                                        <  3:830143/149‑1 (MQ=255)
                                                                                                             tgctgATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCagag                                                                     <  2:855674/118‑1 (MQ=255)
                                                                                                             tgctgATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCagag                                                                     >  1:855674/1‑118 (MQ=255)
                                                                                                              gctgATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCa                                     <  3:623730/149‑1 (MQ=255)
                                                                                                              gctgATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCa                                     <  1:262807/149‑1 (MQ=255)
                                                                                                              gctgATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGAGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCa                                     <  4:350526/149‑1 (MQ=255)
                                                                                                              gctgATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTCACTGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCa                                     <  4:84674/149‑1 (MQ=255)
                                                                                                               ctgATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAAAACCAg                                    <  2:663360/149‑1 (MQ=255)
                                                                                                                  atcgatcTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGt                                             <  2:328646/137‑1 (MQ=255)
                                                                                                                  atcgatcTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGt                                             >  1:328646/1‑137 (MQ=255)
                                                                                                                  atcgatcTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGAt                                 >  1:94858/1‑149 (MQ=255)
                                                                                                                  atcgatcTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGAt                                 >  4:226944/1‑149 (MQ=255)
                                                                                                                   tcgatcTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATg                                >  4:504192/1‑149 (MQ=255)
                                                                                                                     gatcTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGccccc                                                                                        <  2:598954/91‑1 (MQ=255)
                                                                                                                     gatcTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGccccc                                                                                        >  1:598954/1‑91 (MQ=255)
                                                                                                                      atcTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGaaa                             <  4:129090/149‑1 (MQ=255)
                                                                                                                      atcTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGaaa                             <  4:817786/149‑1 (MQ=255)
                                                                                                                      atcTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGaaa                             <  2:924750/149‑1 (MQ=255)
                                                                                                                      atcTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGaaa                             >  2:20772/1‑149 (MQ=255)
                                                                                                                         ttctGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGc                          >  3:307121/1‑149 (MQ=255)
                                                                                                                             gCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGTACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGaa                      <  1:641514/149‑1 (MQ=255)
                                                                                                                             gCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGaa                      <  1:688827/149‑1 (MQ=255)
                                                                                                                               aGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGc                    >  1:505589/1‑149 (MQ=255)
                                                                                                                                      caacaaAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTcc             <  4:798985/149‑1 (MQ=255)
                                                                                                                                       ggcgaaaCGCCAGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGCGGAACAGTGAGAACCAGGATGAAACGCAGAAGCAATTTccg            >  1:607523/5‑149 (MQ=255)
                                                                                                                                       aacaaAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTccg            >  1:879938/1‑149 (MQ=255)
                                                                                                                                         caaAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTccgcc          <  1:20772/149‑1 (MQ=255)
                                                                                                                                           aaaCGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATc                                                                                                     <  4:364588/56‑1 (MQ=255)
                                                                                                                                           aaaCGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATc                                                                                                     >  3:364588/1‑56 (MQ=255)
                                                                                                                                            aaCGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTg       <  4:307121/149‑1 (MQ=255)
                                                                                                                                             aCGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTgg      <  1:710867/149‑1 (MQ=255)
                                                                                                                                              cGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGt     <  4:63618/149‑1 (MQ=255)
                                                                                                                                              cGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGGAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGt     <  2:852843/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
AGCCTCTGCGCCCGCATACAGGAAATCACGCGCCCGACCTTTGTACTGTGGTTTCAGCTCTGCGCCAATCAACAGCCCCATACCGCGAATATCGCTAAATACATCGTACTGCTGATCGATCTTCTGCAGATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCTTCCAGCACTTCAGGGGTATTGATGATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAG  >  NC_000913/3489089‑3489382

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: