| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,799,374:1 | +T | 5.8% | intergenic (‑104/+19) | pheM ← / ← rplT | phenylalanyl‑tRNA synthetase operon leader peptide/50S ribosomal subunit protein L20 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,799,374 | 1 | . | T | 5.8% | 977.9 / 56.4 | 240 | intergenic (‑104/+19) | pheM/rplT | phenylalanyl‑tRNA synthetase operon leader peptide/50S ribosomal subunit protein L20 |
| Reads supporting (aligned to +/- strand): ref base . (112/114); new base T (8/6); total (120/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.83e-01 | |||||||||||
Only 100 of 246 total aligned reads displayed.
CGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGATTCAGGTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGAAATACCGTTCTGACGTGCTGCTGCGTTGATACGCGCAATCCACAGTTGACGGAACTGACGCTTACGTTGACGACGGTCACGGTAAGCATACTGACCAGCTTTGATAACAGCCTGGAAGGCA > NC_000913/1799103‑1799648 | agaCAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGATTCAGGTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTa > 1:198121/1‑275 (MQ=255) cTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGATTCAGGTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCATTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGAGGGCTTTGAAACGAAAAGAGGGAGCCTCG‑CTCCCTCTGTCAACTGGCTTAtcacaaa > 4:591214/1‑269 (MQ=255) tttCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGATTCAGGTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGcc > 2:106231/1‑263 (MQ=255) ccTCCACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGATTCAGGTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAANAGACCTTTATTGAAAAGGCTACGGCGATAAACGTCAATGTTTTGATGGCGTTGAACAGAAAAGAGGGAGACTAG‑CTCACTNTGTCAACTGGATTATGACAGAGCTGNTTTCTCTTTTTCACCAAGAAAGTTGAACg > 3:125966/1‑275 (MQ=255) cgccACTGGGAGGCTTTACGTGGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGATTCAGGTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACg < 4:636543/272‑1 (MQ=255) ctcACGCGCTAGCCTCCTGGATTCAGGTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACgg < 1:83675/274‑1 (MQ=255) aGCCTCCTGGATTCAGGTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCa < 1:3725/273‑1 (MQ=255) cctcctGGATTCAGGTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACag < 2:227140/275‑1 (MQ=255) tGGATTCAGGTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCt < 2:373233/275‑1 (MQ=255) aGGTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑Ct > 7:729669/1‑149 (MQ=255) aGGTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑Ct < 5:247176/149‑1 (MQ=255) cTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCctc < 5:902693/149‑1 (MQ=255) tAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCg < 4:682868/179‑1 (MQ=255) aaaGTAAAAAAAGAAGCGGAAAATATCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAG‑CTAGTCTCCCTCtt < 7:644631/149‑1 (MQ=255) aaaGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCtt < 8:420493/149‑1 (MQ=255) aaaGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCtt < 8:897209/149‑1 (MQ=255) aaGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCttt < 8:247707/149‑1 (MQ=255) aaaaaaaGAAGCGAAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAAc < 7:221458/149‑1 (MQ=255) aaaaaaGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACt > 8:397384/1‑149 (MQ=255) aagaagCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCt < 2:728744/149‑1 (MQ=255) agaagCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCtt < 6:314781/149‑1 (MQ=255) agaagCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTg < 4:97575/274‑1 (MQ=255) aagCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCt < 1:125966/274‑1 (MQ=255) agCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCgg > 4:720304/1‑182 (MQ=255) agCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCt > 4:243467/1‑273 (MQ=255) cGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCCGTaa > 2:82731/1‑275 (MQ=255) ggAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACg < 2:607441/185‑1 (MQ=255) tAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGCTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAgctg > 8:702527/1‑149 (MQ=255) attcattGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGc < 8:1029226/149‑1 (MQ=255) ttcattGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCt > 6:1069090/1‑149 (MQ=255) ttcattGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCt > 7:1030326/1‑149 (MQ=255) cattGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCttt < 7:909201/149‑1 (MQ=255) cattGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCttt < 7:810596/149‑1 (MQ=255) catgGCTTTCGTTACCTTTTGGTACGCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGAAATACCGTTCTGACg < 2:84996/275‑1 (MQ=255) attGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCGACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCtttt > 6:944060/1‑149 (MQ=255) attGCTTGCGGTACCTTTAAGTACTCTGCAAAAAACCGTTATTGAAAAGGCTACGGCGAGAAAAGACAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGAAATACCGTTCTGACg < 2:591214/274‑1 (MQ=255) gcGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTc < 6:127198/110‑1 (MQ=255) gTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCaga > 5:487288/1‑149 (MQ=255) gTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCaga < 6:229270/149‑1 (MQ=255) ttACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGAAATACCGTTCTGACGTGCTGCTTCg > 2:178119/1‑274 (MQ=255) cTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGt < 6:661379/149‑1 (MQ=255) aCTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTa > 7:170164/1‑149 (MQ=255) aCTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTa < 7:30705/149‑1 (MQ=255) tttaaaaGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCATTGCTTTGATGTCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTGTCAACTCGCTGATACCAGAGCTGCTATCGCTTTTTCAACCAGAGCTTTGAACGCTACttt > 6:168876/4‑149 (MQ=255) ttCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACttt > 8:141976/1‑149 (MQ=255) tCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAgg < 1:110577/209‑1 (MQ=255) cAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGt < 6:536545/149‑1 (MQ=255) cAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAAtt > 1:99992/1‑221 (MQ=255) cAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGAAATACCGTTCTGa > 4:101667/1‑244 (MQ=255) aaaaGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTc < 7:1053410/149‑1 (MQ=255) aaaaGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTc < 5:6209/149‑1 (MQ=255) aCCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATa < 6:379497/149‑1 (MQ=255) cTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACt > 7:864537/1‑149 (MQ=255) cTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGAAATACCGTTCTGACGTGCTGCTGCGTTGATACGCGCAATCCACAGTTGACgg > 4:508809/1‑275 (MQ=255) cTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAA‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGAAATCCCGTTCTGACGTGCTGCTGCGTTGATACGCGCAATCCACAGTTGACgg > 2:115567/1‑275 (MQ=255) tttATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTc > 5:438122/1‑141 (MQ=255) ttATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGc > 8:1067412/1‑149 (MQ=255) ttATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGGATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAAtt > 2:704847/1‑212 (MQ=255) ttATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATtgat > 2:642928/1‑206 (MQ=255) ttATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGAAATACCGTTCTGACGTGCTGCGGCGTTGATACGCCAAATCCAAAGTTTACGGac > 4:490110/1‑274 (MQ=255) aTTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGa < 7:244028/149‑1 (MQ=255) tGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGAAATACCGTTCTGACGTGCTGCTGCGTTGATACGCGCAATCca < 2:490110/259‑1 (MQ=255) tGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAG‑CTAGTCTCCctc < 5:942037/71‑1 (MQ=38) gAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGatat > 5:83141/1‑149 (MQ=255) aaaGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCa > 5:359829/1‑149 (MQ=255) aaGGCTACGGCGATAAAAGTGAATGTTTTGATGGCGTGGAAACGAAAAGAGGGAGACTTG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGAAATACCGTTCTGACGTGCTGCTGCGTTGATACGCGCAATCCACAGTTGACGGAACTGACGCt < 4:388744/275‑1 (MQ=255) aaGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACt > 3:28359/1‑75 (MQ=255) aaGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACNGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAATANATACCGTTCTGACGTGCTGCTGCGTTGATANNGGTAATTCAAAGTTGACGGaagcgaacgt > 3:92095/1‑267 (MQ=255) aGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGc < 8:864537/149‑1 (MQ=255) cGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGAt < 7:397384/149‑1 (MQ=255) cGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGAt < 6:365343/149‑1 (MQ=255) gATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTa < 7:369741/149‑1 (MQ=255) tAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCa > 2:365414/1‑159 (MQ=255) aGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACag < 4:365414/159‑1 (MQ=255) aaTGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GAttt < 8:59228/149‑1 (MQ=255) aTGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGAAATACCGTTCTGACGTGCTGCTGCGTTGATACGCGCAATCCACAGTTGACGGAACTGACGCTTACGTTGACGACGGTCACGGt < 2:304951/274‑1 (MQ=255) tGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACaga < 5:97773/149‑1 (MQ=255) aTGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAgg < 8:536405/149‑1 (MQ=255) gCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACGAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGcc < 6:957482/118‑1 (MQ=255) ttGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCttttt > 8:32791/1‑149 (MQ=255) ttGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCttttt > 5:176893/1‑149 (MQ=255) ttGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCttttt > 5:328611/1‑149 (MQ=255) gAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTc > 8:819231/1‑149 (MQ=255) aaaCGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCa > 7:675407/1‑149 (MQ=255) aaCGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAg < 5:749237/149‑1 (MQ=255) gttgaaaGAGGGAG‑CTAGTCTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAgg > 7:555630/5‑149 (MQ=255) aCGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTCTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAgg > 6:608961/1‑149 (MQ=255) taaaGGGGGTGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGAAATACCGTTCTGACGTGCTGCTGCGTTGATACGCGCAATCCACAGTTGACGGAACTGACGCTTACGTTGACGACGGTCACGGTAAGCATACTGACCAGCTTTGATa < 4:178119/274‑1 (MQ=255) aaaaGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTaa > 4:666481/1‑167 (MQ=255) agagGGAG‑CTAGTCTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATtg > 8:754246/1‑149 (MQ=255) gagGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGaaa < 2:666481/167‑1 (MQ=255) agGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATtgat < 7:328132/149‑1 (MQ=255) agGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATtgat < 6:811269/149‑1 (MQ=255) gggAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATtgatg > 6:433447/1‑149 (MQ=255) aCTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCa > 1:131846/1‑138 (MQ=255) aG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGATCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCt < 5:1090540/149‑1 (MQ=255) g‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATc < 8:494357/88‑1 (MQ=255) g‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATc > 7:494357/1‑88 (MQ=255) g‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATtga < 3:131846/138‑1 (MQ=255) g‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGAAATACCGTTCTGACGTGCTGCTGCGTTGATACGCGCAATCCACAGTTGACGGAACTGACGCTTACGTTGACGACGGTCACGGTAAGCATACTGACCAGCTTTGATAACAGCCTGGAAGGCa < 2:508809/275‑1 (MQ=255) | CGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGATTCAGGTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTC‑GATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGTAAGAAATACCGTTCTGACGTGCTGCTGCGTTGATACGCGCAATCCACAGTTGACGGAACTGACGCTTACGTTGACGACGGTCACGGTAAGCATACTGACCAGCTTTGATAACAGCCTGGAAGGCA > NC_000913/1799103‑1799648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |