New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 120780594 (0.490)86 (0.510) 71/266 NT 51.5% coding (305/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 = 1209602 78 (0.460)pseudogene (18/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 324 total aligned reads displayed.

GGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGT  >  NC_000913/1207533‑1208077
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                
                 gTAAGAACGGTTTTACCCGTGGTAACCCCCAGCCCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagca                                                                                                                                                                                                                                                               <  4:143491/275‑1 (MQ=255)
                    ggtgtgacctgccgataatgtccctagaagttttttcagtcccggcctttcgtactgtgtgccgcttatcttgtcttcaaacatcagctcgcatccttcacagttcagcggattacgttgtagatctgtgttctggtcagtggctgatacgcgtacatagccaataagcatgttaaatccgcctggtaaaagcaggaatgatgacatttgcttggtatttcttcatcttcataaacgTTGGTTTGGGAGAAGGAGCAAATCTCAATgcagca                                                                                                                                                                                                                                                               >  4:543016‑M1/238‑272 (MQ=255)
                           ttttACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCGGTTAAGCCGCAAGAATCCGTTGGGCGATATCACATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAACAAAACTCAATGCAGTAACGGCTACAt                                                                                                                                                                                                                                                     >  2:97676/1‑275 (MQ=255)
                              gccgataatgtcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgctgtagatctgtgttctggtcatttgtttatacgcgtacatagccaataagcatgttaaatcccactggtacaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTTGTCTGGGAGGATGAGCAAAAATCACTGAAGCAACGGCTACATTAg                                                                                                                                                                                                                                                  <  1:92980‑M1/48‑1 (MQ=255)
                                cccGTGGTAACCCCCAGACCGGCACGCCTGCCCCCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTACCGCACTTCGCTCGCTGCTGTTAAGCCGCAAGAATCCGGTTGGCGATATCAAATCGGATGGCACTGTGCCAACGGCCCTCGAAAACCTTTGTTTGGGGGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAggc                                                                                                                                                                                                                                                >  2:411552/1‑273 (MQ=255)
                                                      cACGCCTGCCACCGGTCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACGTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAAACCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAACCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata                                                                                                                                                                                                                           <  2:190917/274‑1 (MQ=255)
                                                                   gttttGGGTGATGACTATTTTGACATGTGGCAGGGGGAACTTGGCAGCGGTGGGGGTGCTGCCGGTGCCAGCCTGGGGAGGGGGCGGCAGGACCAGTTAGTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAGTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg                                                                                                                                                                                                             <  4:411552/270‑1 (MQ=21)
                                                                   gATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGCGAAGGctctgcattacctgttggtgtcccgtttccgtggccttacgccactccgccaaccggctggcttaaatg                                                                                                                                                                                                             >  1:149246‑M1/1‑206 (MQ=255)
                                                                                    ctTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttt                                                                                                                                                                                             >  2:635580‑M1/1‑189 (MQ=255)
                                                                                       tGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                                                                                                                                                                  <  2:686378/202‑1 (MQ=255)
                                                                                            tGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAAAGGCTCTCGAAAACCTTGGTTTGGGGGAAGGctatgcattacctgttgggttcccggttccgtggccttcaaccactccgccaccaggctggccgaaatgcacaggtcccactttttctgctgca                                                                                                                                                                                    >  4:295270‑M1/1‑181 (MQ=255)
                                                                                                                       tggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggccgaaatgcaatggttccggtttttctgctgaagaaaccccgggactggaaaaggcttat                                                                                                                                                         >  4:207751‑M1/1‑154 (MQ=255)
                                                                                                                            gCATCCGGTGCCAGACTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG                                                                                                                                                                                                                                                                                  >  7:83553‑M1/1‑149 (MQ=255)
                                                                                                                              agcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAg                                                                                                                                                                                                                                                                                >  8:616048‑M1/132‑149 (MQ=255)
                                                                                                                              aTCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAg                                                                                                                                                                                                                                                                                >  5:916707/1‑149 (MQ=255)
                                                                                                                                     tacgtcttagatctgtgttctggtcatttgttgatacgcgtacatcgccaataagcatgttaaatccccctggtaacagcagtaaagatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAATGAGCAAACCTCATTGCAGCACTGGCTACATTAGGCCGCCCCGGTTCCATCGCTATACCGGTTATGATTGGTGGTATTGAGTAATCAGTAACCATTGTGTGGGGGTGGAATGCCGACAAggcatctgccgcgtgggg                                                                                                                                           <  4:265259‑M1/151‑9 (MQ=255)
                                                                                                                                        gttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                                                                                                                                                                      >  6:122607‑M1/122‑149 (MQ=255)
                                                                                                                                          tgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATg                                                                                                                                                                                                                                                                    >  8:875495‑M1/120‑149 (MQ=255)
                                                                                                                                             ggAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                                                                                                                                                                 <  7:883216‑M1/149‑18 (MQ=255)
                                                                                                                                                 aaGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAAc                                                                                                                                                                                                                                                             >  7:99056/1‑149 (MQ=255)
                                                                                                                                                  aGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctgg                                                                                                                                                                                                                     <  4:389231‑M1/188‑62 (MQ=255)
                                                                                                                                                    tgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                                                                                                                                                                          >  7:779024‑M1/110‑149 (MQ=255)
                                                                                                                                                       tctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTAc                                                                                                                                                                                                                                                       >  5:1015855‑M1/107‑149 (MQ=255)
                                                                                                                                                        ggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACa                                                                                                                                                                                                                                                      >  7:460915/1‑149 (MQ=255)
                                                                                                                                                          ggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAtt                                                                                                                                                                                                                                                    >  5:583022‑M1/104‑149 (MQ=255)
                                                                                                                                                           aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                                                                                                                                                                                                                   <  8:605398/149‑1 (MQ=255)
                                                                                                                                                            cGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                                                                                                                                                                                                                     <  2:354847/162‑1 (MQ=255)
                                                                                                                                                             gACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                                                                                                                                                                 >  8:386562‑M1/1‑116 (MQ=255)
                                                                                                                                                                  gttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCa                                                                                                                                                                                                                                            <  6:198780‑M1/54‑1 (MQ=255)
                                                                                                                                                                   ttccttacCGCACTTCGCGCTCTGCTGTTAAGCCGCAAGATTCCCGTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCTATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAACAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGtt                                                                                                               <  2:618907/270‑1 (MQ=255)
                                                                                                                                                                       ttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAt                                                                                                                                                                                                                                                     >  8:540253/1‑135 (MQ=255)
                                                                                                                                                                            gtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                                                                                                                                                                                                                  >  7:636840‑M1/86‑149 (MQ=255)
                                                                                                                                                                            gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                                                                                                                                                                                                                  <  7:537832/149‑1 (MQ=255)
                                                                                                                                                                             tacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                                                                                                                                                                                 >  7:184989‑M1/85‑149 (MQ=255)
                                                                                                                                                                              acatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                                                                                                                                                                >  6:311011‑M1/84‑149 (MQ=255)
                                                                                                                                                                                ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcca                                                                                                                                                                                                                              >  8:130127‑M1/1‑97 (MQ=255)
                                                                                                                                                                                   gcgggcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgg                                                                                             <  2:207751‑M1/275‑182 (MQ=255)
                                                                                                                                                                                   gccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata                                                                                                                                                                                                                           <  5:263906‑M1/71‑1 (MQ=255)
                                                                                                                                                                                    ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAc                                                                                                                                                                                                                          <  7:142557‑M1/72‑1 (MQ=255)
                                                                                                                                                                                        taagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTCGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGc                                                                                        <  2:267338‑M1/202‑1 (MQ=255)
                                                                                                                                                                                              tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAAc                                                                                                                                                                                                                                                             <  4:522564‑M1/37‑1 (MQ=255)
                                                                                                                                                                                              tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                                                                                                                                                                                                               <  4:595996‑M1/67‑1 (MQ=255)
                                                                                                                                                                                                aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                                                                                                                                                                              >  5:121857/1‑149 (MQ=255)
                                                                                                                                                                                                aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                                                                                                                                                                              <  5:232128/149‑1 (MQ=255)
                                                                                                                                                                                                  gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                                                                                                                                                            <  7:528341/149‑1 (MQ=255)
                                                                                                                                                                                                  aaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                                                                                                                                                                         >  2:522564‑M1/64‑104 (MQ=255)
                                                                                                                                                                                                  aaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata                                                                                                                                                                                                                           >  2:595996‑M1/64‑134 (MQ=255)
                                                                                                                                                                                                  aaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                                                                                                                                                            >  5:393394‑M1/64‑149 (MQ=255)
                                                                                                                                                                                                    cGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctgactgaaatgcaa                                                                                                                                                                                                          <  5:215272‑M1/149‑73 (MQ=255)
                                                                                                                                                                                                     gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaat                                                                                                                                                                                                              >  6:810736‑M1/1‑76 (MQ=255)
                                                                                                                                                                                                         cctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                                                                                                                                                                                                               <  4:710382‑M1/67‑1 (MQ=255)
                                                                                                                                                                                                         cctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa                                                                                                                                                                                                                 <  4:680017‑M1/81‑1 (MQ=255)
                                                                                                                                                                                                          ctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCgg                                                                                                                                                                                                                                        <  2:556031‑M1/58‑1 (MQ=255)
                                                                                                                                                                                                          ctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                                                                                                                                                    >  8:859597‑M1/56‑149 (MQ=255)
                                                                                                                                                                                                          aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                                                                                                                                                    <  7:254779/149‑1 (MQ=255)
                                                                                                                                                                                                           tggtaaaagcaggcatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATCGAg                                                                                                                                                                                                   >  8:920455‑M1/55‑149 (MQ=255)
                                                                                                                                                                                                           tggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                                                                                                                                                                   >  5:614983‑M1/55‑149 (MQ=255)
                                                                                                                                                                                                              taaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGATTTCATAGCTATACCGGTTATAATTGGTGGTATTGAGCaa                                                                                                                                                                                                >  5:320428‑M1/52‑149 (MQ=255)
                                                                                                                                                                                                              cGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgct                                                                                                                                                                                                <  7:744394‑M1/149‑83 (MQ=255)
                                                                                                                                                                                                                   ggCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctggga                                                                                                       >  2:298551‑M1/1‑62 (MQ=255)
                                                                                                                                                                                                                     aggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTaa                                                                                                                                                                                         >  8:510484‑M1/45‑149 (MQ=255)
                                                                                                                                                                                                                       gaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGCCAATGTcagcgac                                                         <  4:343669‑M1/233‑3 (MQ=255)
                                                                                                                                                                                                                       gaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCa                                                         <  1:142367‑M1/233‑1 (MQ=255)
                                                                                                                                                                                                                        tatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGNTATTGAGCAATCATTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGCTGGNAATAAGGATTACTTCCCGGTGGGTTTTAATAATTCCGTTGTTGCTNTNTNTGACAATTATTGCAAttttatttcca                                                        >  3:74735/1‑265 (MQ=255)
                                                                                                                                                                                                                          tgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                                                                                                                                                                    >  6:630288‑M1/40‑149 (MQ=255)
                                                                                                                                                                                                                          tCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                                                                                                                                                                    <  5:805146/149‑1 (MQ=255)
                                                                                                                                                                                                                           cAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaag                                                                                                                                                                                   <  8:212900‑M1/149‑96 (MQ=255)
                                                                                                                                                                                                                            atgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCa                                                                                                                                                                                  >  7:606614‑M1/38‑149 (MQ=255)
                                                                                                                                                                                                                              aTCGGAAGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctgactgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcaggggtatg                                                  <  2:454430‑M1/275‑225 (MQ=255)
                                                                                                                                                                                                                                catttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg                                                                                                                                                                              <  7:1060911‑M1/116‑1 (MQ=255)
                                                                                                                                                                                                                                  gATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataccc                                                                                                                                                                            >  4:218431‑M1/1‑47 (MQ=255)
                                                                                                                                                                                                                                      gCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaa                                                                                                                                                                        <  2:218431‑M1/149‑107 (MQ=255)
                                                                                                                                                                                                                                          ttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATg                                                                                                                                                                    <  6:401480‑M1/126‑1 (MQ=255)
                                                                                                                                                                                                                                             tttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                                                                                                                                                    >  8:304172‑M1/21‑114 (MQ=255)
                                                                                                                                                                                                                                             tttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCg                                                                                                                                                                 <  6:322131‑M1/129‑1 (MQ=255)
                                                                                                                                                                                                                                              cAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaa                                                                                                                                                                <  6:930072‑M1/149‑115 (MQ=255)
                                                                                                                                                                                                                                              cAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaa                                                                                                                                                                <  5:881250‑M1/149‑115 (MQ=255)
                                                                                                                                                                                                                                               aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataccccgaactggcaaag                                                                                                                                                               <  6:1027283‑M1/149‑116 (MQ=255)
                                                                                                                                                                                                                                               aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                                                                                                                                                    <  7:381167/112‑1 (MQ=255)
                                                                                                                                                                                                                                                      tctcGAACACCTTGGGTTGGGAGAAGGctctgcattacctgtttgtttcccggttccttggccttcagccactccgccaacaggctggctgacatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcaggggtatgcaacggaggatcatgctcatggat                          <  4:635580‑M1/275‑249 (MQ=255)
                                                                                                                                                                                                                                                      tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatc                                                                                                                                                        >  5:744425‑M1/1‑27 (MQ=255)
                                                                                                                                                                                                                                                      tctcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt                                                                                                                                                                                                               <  5:1080894/94‑1 (MQ=255)
                                                                                                                                                                                                                                                      tctcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt                                                                                                                                                        <  5:188545/149‑1 (MQ=255)
                                                                                                                                                                                                                                                      tctcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGCACGCACCGGTTTCATAGCTATCCCGGTTATGACTGGTGTTTTTGAGCAGTCAGTAATCAGTCAGTGGGGGTGGAATGCCGCAAACGCATCTGCCTCTGGGGGGGATGGAAATACATGTGTATTCCCGGTTGCGTGTAATATTGACTGTGTTGCCGTTGTTGCAATTTATGACAATGTCAGGGGACCCAGCAATGCAGTTGCAACGGGGGGaaacc                          >  4:112988/1‑271 (MQ=255)
                                                                                                                                                                                                                                                       ctcGAAGACCTTGGTTTGGGAGAAGGctctgcattacctgtgggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatcc                                                                                                                                                       <  8:732741‑M1/149‑124 (MQ=255)
                                                                                                                                                                                                                                                        tcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt                                                                                                                                                                                                               >  6:888278‑M1/10‑92 (MQ=255)
                                                                                                                                                                                                                                                        tcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGCTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCt                                                                                                                                                      >  8:95914/1‑149 (MQ=255)
                                                                                                                                                                                                                                                         cGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccga                                                                                                                                                     <  6:1007997‑M1/149‑126 (MQ=255)
                                                                                                                                                                                                                                                          gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgc                                                                           <  2:25137‑M1/222‑200 (MQ=255)
                                                                                                                                                                                                                                                          gAAAACCTTGGGTGGGGAGAAGGGGCAAAACTCAATGCAGCAACGGCTACGTTAGGACGCACCGGTTTCATAGCGATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAGGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGGTTAAGAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTAGCAATGCAGTGGCaa                                      <  2:112988/259‑1 (MQ=255)
                                                                                                                                                                                                                                                           taaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGcc                                                                                                                                                   <  5:780817‑M1/143‑1 (MQ=255)
                                                                                                                                                                                                                                                           aaaaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaa                                                                                                                                                                <  6:233373‑M1/136‑115 (MQ=255)
                                                                                                                                                                                                                                                            aaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCct                                                                                                                                                  <  8:346342‑M1/144‑1 (MQ=255)
                                                                                                                                                                                                                                                                gTTGGTCTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg                                                                                                                                              <  6:780649‑M1/148‑1 (MQ=255)
                                                                                                                                                                                                                                                                cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacag                                                                                                                                                                                                                          >  6:740443‑M1/1‑17 (MQ=255)
                                                                                                                                                                                                                                                                     TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggggg                                                                                                                                         >  8:192186‑M1/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                         GGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                                                                                                                                                    >  5:514814‑M1/1‑86 (MQ=255)
                                                                                                                                                                                                                                                                         GGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                                                                                                                                                    <  6:514814‑M1/86‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcaggggtatgcaacggaggatcatgctcatggattaccgtcaagatccacgattgtga  <  2:387293‑M1/275‑273 (MQ=255)
                                                                                                                                                                                                                                                                               GGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGt                                                                                                                                                                          <  1:47078‑M1/106‑1 (MQ=255)
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                
GGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGT  >  NC_000913/1207533‑1208077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.