BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3838216	533 (2.800)	4 (0.020)	4/282	NT	0.76%	intergenic (+79/‑32)	setC/yicL	putative arabinose efflux transporter/EamA family inner membrane putative transporter
*	?	NC_000913	= 3838231	543 (3.020)	4 (0.020)	4/282	NT	0.76%	intergenic (+94/‑17)	setC/yicL	putative arabinose efflux transporter/EamA family inner membrane putative transporter
Rejected: Frequency below/above cutoff threshold.

Only 100 of 689 total aligned reads displayed.

TTTTCAGGACTTGATGCCTGAAAAAATAGGCTCTGCGACAACGTTATATGCAAATACTTCACGCGTCGGCTGGATTATCGCCGGCTCTGTTGACGGAATTATGGTTGAAATCTGGAGCTACCATGCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGTTTTTGACTATGACGCGTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCG  >  NC_000913/3837942‑3838485

          ttGATGCCTGAAAAAATAGGCTCTGCGACAACGTTATATGCAAATACTTCACGCGTCGGCTGGATTATAGCCGGCTCTGTTGACGGAATTATGGTTGAAATCTGGAGCTACCATGCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACa                                                                                                                                                                                                                                                                     <  4:484796/275‑1 (MQ=255)

            aaTGCATGAAAAAAAAGGCTCTGAGAAAAAGTTATATGCAAATACATCACGGGTAGGGGAGATTATGGCCGGGTTGGTTGACGGAATTATGGGTGGAATCTGGAGGTTCCATGCGTTGTTGTGGCTGTAGATGGGGATGTTTGGTATTGCGATGAGTTGGCTGCTGTTGATTAAAGATATGTAGCTGACCAGTCTGGGCTAAGAAAAATCGGCGGGGCGCAAACAGTGCCATCCTCGCAATTTTTGCTATCATGCCTGCATACATAAACGACaaa                                                                                                                                                                                                                                                                   <  4:116848/274‑1 (MQ=255)

                       aaaaAGGCTCTGGGTAAACGTTATATTCAAATACTTCACGCGTCGGCTGGATTATCGCCGGCTCTGTTGACGGAATTATGGTTGAAATCTGGGGCTACCATGCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtatgca                                                                                                                                                                                                                                                         >  4:596513‑M2/1‑267 (MQ=255)

                             gCTCTGCGACAACGTTTTATGCAAATACTTCACGCGTCGGCTGGATTATCGCCGGCTCTGTTGACGGAATTATGGTTGAAATCTGGAGCTACCATGCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGGAAACAGAGCCATCCTCGCCCTCTTTGATATCATGCCTGCATACATACACTACAAAACAgtctacagcggga                                                                                                                                                                                                                                                   <  1:135134‑M2/274‑14 (MQ=255)

                                     aCAACGTTATATGCAAATACTTCACGCGTCGGCTGGATTATCGCCGGCTCTGTTGACGGAATTATGGTTGAAATCTGGAGCTACCATGCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGt                                                                                                                                                                                                                                          <  2:141622/275‑1 (MQ=255)

                                       acatttATATGCAATTCATTCACGCGTCGGCTGGATTATCGCCGGCTCTGTTGACGGAATTATGGTTGAAATCTGGAGCTACCTTGCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGGGATGAATTGCCGGCCGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAGGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCGTTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTc                                                                                                                                                                                                                                        <  4:194655/271‑1 (MQ=255)

                                            tataTGCAAATACTTCACGCGTCGGCTGGATTATCGCCGGCTCTGTTGACGGAATTATGGTTGAAATCTGGAGCTACCATGCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTccac                                                                                                                                                                                                                                     <  2:486588/273‑1 (MQ=255)

                                                          tCACGCGTCGGCTGGATTATCGCCGGCTCTTTTGACGGAATTATGGTTGAAATCTGGAGCTACCATGCGTTGTTCTGGCTGGCGATAGGGGTGTTGGGTAGTGCGAAGATTTGCCTGCTGTTTATTAAAGATATTTAGGTCACCAGTCTGGGCTGAGAAAATTCGGCATGGCGCAAACCGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACAAAAACTACAAAACAGTATCCAAAGGGAAAAATGGGTTCCACACAAAAgggagcgac                                                                                                                                                                                                                      >  4:285364/1‑268 (MQ=255)

                                                               cgTCGGCTGGATTATCGCCGGCTCTGTTGACGGAATTATGGTTGAAATCTGGAGCTACCATGCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAgg                                                                                                                                                                                                                             <  2:50357/262‑1 (MQ=255)

                                                                                  ggCTCTGTTGACGGAATTATGGTTGAAATCTGGAGCTACCATGCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGAATGCTGAACGTTCTGATTGCCGCCGtgttg                                                                                                                                                                                             >  2:71850/1‑275 (MQ=255)

                                                                                        gTTGATGTAATTTTGTTTGAAAGCTGGAGGTACCATGCGTGTTTCTGGCTGGCGATAGGGATGTTGGTTATTGGTATGATTTGCCTGCTGTTTATTAAAGATATTTAGCCCACCCGGCTGGGCTAAGAAAAACTGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTgggg                                                                                                                                                                                        <  4:403703/274‑1 (MQ=255)

                                                                                                     tGGTTGAAATCTGGAGCTACCATGCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCt                                                                                                                                                                          <  2:82953/275‑1 (MQ=255)

                                                                                                          tagttttGGAGTTACGCTGTGTNNTTCTGNTGGGCGATGTGGATGTTGGGTATTGCGAGTATTTGCCTGGTGTTTATTAAAGATAATTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGATATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTgcgcg                                                                                                                                                                     <  3:18023/269‑1 (MQ=255)

                                                                                                                      tACCATGCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATaaa                                                                                                                                                                                                                                                                          <  2:688801/162‑1 (MQ=255)

                                                                                                                           gtcgtttgtCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTTGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCa                                                                                                                                                    <  2:436287/267‑1 (MQ=255)

                                                                                                                            gCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAgg                                                                                                                                                                                                                             <  4:447388/201‑1 (MQ=255)

                                                                                                                                   tCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATaaa                                                                                                                                                                                                                                                                          <  7:452136/149‑1 (MQ=255)

                                                                                                                                    ccggctggcGATATGGATGTGGGGTATTGCGATGATTTGCCTGCTGTTTATTATAGATATTTAGCTCACCAGTCTGGGCTACGAAAAATCGGCTTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAAc                                                                                                                                                                                                                                                                         <  8:77513/147‑1 (MQ=255)

                                                                                                                                           gtgATAGGGATGTTGGGTATTGCTTTGATTTGCCTGTTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACaaaa                                                                                                                                                                                                                                                                  <  6:658545/147‑1 (MQ=255)

                                                                                                                                           gcGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACaaaa                                                                                                                                                                                                                                                                  <  6:919035/149‑1 (MQ=255)

                                                                                                                                            ggATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCTTACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGc                                                                                                                                   <  4:544763/274‑1 (MQ=255)

                                                                                                                                             gATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAACAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGCCAAAACa                                                                                                                                                                                                                                                                <  6:706797/149‑1 (MQ=255)

                                                                                                                                               tAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgt                                                                                                                                                                                                                                                              >  6:341057‑M2/1‑147 (MQ=255)

                                                                                                                                               tAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgt                                                                                                                                                                                                                                                              >  8:717812‑M2/1‑147 (MQ=255)

                                                                                                                                                aGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgta                                                                                                                                                                                                                                                             >  6:532111‑M2/1‑146 (MQ=255)

                                                                                                                                                  ggATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCGCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtatg                                                                                                                                                                                                                                                           <  8:355098‑M2/149‑6 (MQ=255)

                                                                                                                                                   gATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtatgc                                                                                                                                                                                                                                                          >  6:876784‑M2/1‑143 (MQ=255)

                                                                                                                                                   gATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtatgc                                                                                                                                                                                                                                                          >  6:966021‑M2/1‑143 (MQ=255)

                                                                                                                                                   gATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtatgc                                                                                                                                                                                                                                                          <  5:51760‑M2/149‑7 (MQ=255)

                                                                                                                                                   gATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgt                                                                                                                                                                                                                                                              >  7:945465‑M2/1‑143 (MQ=255)

                                                                                                                                                     tGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtatgcag                                                                                                                                                                                                                                                        >  7:308386‑M2/1‑141 (MQ=255)

                                                                                                                                                       ttGGGTATTGTGATGATTTGCCTGCTGTGTATTAAAGATATTTAGCTCACCAGTCGGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACACAACAGTATGCagag                                                                                                                                                                                                                                                      <  6:44930/149‑1 (MQ=255)

                                                                                                                                                         gggTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAggg                                                                                                                                                                                                                                                    >  7:233390/1‑149 (MQ=255)

                                                                                                                                                                gCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATg                                                                                                                                                                                                                                             <  5:579929/149‑1 (MQ=255)

                                                                                                                                                                  gatgatTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATggg                                                                                                                                                                                                                                           <  6:735263/149‑1 (MQ=255)

                                                                                                                                                                      atTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGa                                                                                                                                                                                                                                                   >  2:337203/1‑137 (MQ=255)

                                                                                                                                                                          gCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGaaaaa                                                                                                                                                                                                                                               <  4:337203/137‑1 (MQ=255)

                                                                                                                                                                            ctgctgTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTgggg                                                                                                                                                                                        <  2:39526/190‑1 (MQ=255)

                                                                                                                                                                             tgctgTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGaa                                                                                                                                                                                                                                >  5:351272/1‑149 (MQ=255)

                                                                                                                                                                              gctgTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGaaa                                                                                                                                                                                                                               <  5:932234/149‑1 (MQ=255)

                                                                                                                                                                                 gTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAggg                                                                                                                                                                                                                            <  5:304392/149‑1 (MQ=255)

                                                                                                                                                                                 gTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAggg                                                                                                                                                                                                                            >  6:575695/1‑149 (MQ=255)

                                                                                                                                                                                    tattaAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGAt                                                                                                                                                                                                                         <  5:118290/149‑1 (MQ=255)

                                                                                                                                                                                     attaAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATg                                                                                                                                                                                                                        >  8:233445/1‑149 (MQ=255)

                                                                                                                                                                                         aaGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGa                                                                                                                                                                                                                    <  7:117047/149‑1 (MQ=255)

                                                                                                                                                                                          aGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGaa                                                                                                                                                                                                                   >  5:451567/1‑149 (MQ=255)

                                                                                                                                                                                            atatTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACg                                                                                                                                                                                                                 >  5:973638/1‑149 (MQ=255)

                                                                                                                                                                                              atTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGtt                                                                                                                                                                                                               <  6:842989/149‑1 (MQ=255)

                                                                                                                                                                                               tttAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTc                                                                                                                                                                                                              <  7:577968/149‑1 (MQ=255)

                                                                                                                                                                                                  aGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGa                                                                                                                                                                                                           <  8:659742/149‑1 (MQ=255)

                                                                                                                                                                                                    cTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGAtt                                                                                                                                                                                                         <  5:767007/149‑1 (MQ=255)

                                                                                                                                                                                                      cACCAGTCTAGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGAtt                                                                                                                                                                                                         >  4:706513/1‑147 (MQ=255)

                                                                                                                                                                                                       aCCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACTGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGc                                                                                                                                                                                                                       <  7:697281/132‑1 (MQ=255)

                                                                                                                                                                                                       aCCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTgcc                                                                                                                                                                                                      >  8:55273/1‑149 (MQ=255)

                                                                                                                                                                                                       aCCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTgc                                                                                                                                                                                                       >  4:666690/1‑148 (MQ=255)

                                                                                                                                                                                                           gTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATaaa                                                                                                                                                                                                                                                                          <  2:642220/77‑1 (MQ=255)

                                                                                                                                                                                                           gTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtatgcag                                                                                                                                                                                                                                                        >  2:557778‑M2/1‑87 (MQ=255)

                                                                                                                                                                                                              tGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCgtgt                                                                                                                                                                                               <  6:278810/149‑1 (MQ=255)

                                                                                                                                                                                                                  cTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTtgtg                                                                                                                                                                                           <  7:533044/149‑1 (MQ=255)

                                                                                                                                                                                                                   tAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTgg                                                                                                                                                                                          <  7:8072/149‑1 (MQ=255)

                                                                                                                                                                                                                      gAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAgg                                                                                                                                                                                                                             <  7:738961/111‑1 (MQ=255)

                                                                                                                                                                                                                      gAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGa                                                                                                                                                                                       >  6:119492/1‑149 (MQ=255)

                                                                                                                                                                                                                       aaaaaTCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGaa                                                                                                                                                                                      <  6:234261/149‑1 (MQ=255)

                                                                                                                                                                                                                       aaaaaTCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGaa                                                                                                                                                                                      <  7:913909/149‑1 (MQ=255)

                                                                                                                                                                                                                       aaaaaTCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGaa                                                                                                                                                                                      >  5:891078/1‑149 (MQ=255)

                                                                                                                                                                                                                       aaaaaTCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGCGGa                                                                                                                                                                                                                          <  5:85270/113‑1 (MQ=255)

                                                                                                                                                                                                                       aaaaaTCGGCGTGGCGCAAACAGAGCCATCCTCGCCAATTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGaa                                                                                                                                                                                      <  5:80730/149‑1 (MQ=255)

                                                                                                                                                                                                                          aaTCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGtgttgt                                                                                                                                                                                            >  2:271361/1‑140 (MQ=255)

                                                                                                                                                                                                                               gCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAggg                                                                                                                                                                              <  5:1014278/149‑1 (MQ=255)

                                                                                                                                                                                                                               gCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAggg                                                                                                                                                                              >  8:153321/1‑149 (MQ=255)

                                                                                                                                                                                                                               gCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTgcgcg                                                                                                                                                                     <  4:731840/158‑1 (MQ=255)

                                                                                                                                                                                                                                    gcgcAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTccac                                                                                                                                                                                                                                     <  1:81197/89‑1 (MQ=255)

                                                                                                                                                                                                                                      gcAAACAGAGCCATCCTCGCCATTTTTGCTAGCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGAATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTgcg                                                                                                                                                                       >  8:185212/1‑149 (MQ=255)

                                                                                                                                                                                                                                         aaCAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTgcgcgc                                                                                                                                                                    >  7:1032834/1‑149 (MQ=255)

                                                                                                                                                                                                                                           cAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCaa                                                                                                                                                                  <  7:383604/149‑1 (MQ=255)

                                                                                                                                                                                                                                            agagCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAAt                                                                                                                                                                 >  7:640999/1‑149 (MQ=255)

                                                                                                                                                                                                                                                  aTCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTgggg                                                                                                                                                                                        <  1:108027/120‑1 (MQ=255)

                                                                                                                                                                                                                                                   tCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGACAGGGGATGCTGAACGTTCTg                                                                                                                                                                                                            >  1:186016/1‑99 (MQ=255)

                                                                                                                                                                                                                                                      tCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGAtt                                                                                                                                                                                                         <  5:19660/99‑1 (MQ=255)

                                                                                                                                                                                                                                                      tCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGa                                                                                                                                                       >  6:618561/1‑149 (MQ=255)

                                                                                                                                                                                                                                                      tCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGa                                                                                                                                                       <  5:1069942/149‑1 (MQ=255)

                                                                                                                                                                                                                                                        gCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtatgcaggcatgatagcaaaaatggcgaggatggctctgtttgcgccacgccgatttttcttagcccagactggtga                                                                                                                                                                                  >  8:927834‑M2/1‑42 (MQ=255)

                                                                                                                                                                                                                                                         ccATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCa                                                                                                                                                    >  8:281437/1‑149 (MQ=255)

                                                                                                                                                                                                                                                           aTTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATa                                                                                                                                                                <  5:659572/135‑1 (MQ=255)

                                                                                                                                                                                                                                                                   tATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAgg                                                                                                                                                                               <  6:181573/112‑1 (MQ=255)

                                                                                                                                                                                                                                                                   tATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATg                                                                                                                                          >  6:81039/1‑149 (MQ=255)

                                                                                                                                                                                                                                                                    aTCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAggg                                                                                                                                                                              <  8:1074168/112‑1 (MQ=255)

                                                                                                                                                                                                                                                                     tCATGCCTGCATACATAAACGACAAAACAGTATGCAGATGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATgtc                                                                                                                                        >  8:872776/1‑149 (MQ=255)

                                                                                                                                                                                                                                                                      cATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTGTGCGCGCAATACATCATGGAGCAAAGCCAGATgtcg                                                                                                                                       <  7:153566/149‑1 (MQ=255)

                                                                                                                                                                                                                                                                        tGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATgtcgtc                                                                                                                                     <  8:42612/149‑1 (MQ=255)

                                                                                                                                                                                                                                                                             gCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGAAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGt                                                                                                                                <  8:1022289/149‑1 (MQ=255)

                                                                                                                                                                                                                                                                              cATACtgttttgtcgtttatgtatgcaggcatgatagcaaaaatggcgaggatggctctgtttgcgccacgccgatttttcttagcccagactggtgagctaaatatctttaataaacagcaggcaaatcatcgcaatacccaacatcc                                                                                                                               <  6:1028528‑M1/149‑145 (MQ=255)

                                                                                                                                                                                                                                                                               atacataAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGttt                                                                                                                              >  8:521441/1‑149 (MQ=255)

                                                                                                                                                                                                                                                                               aTACtgttttgtcgtttatgtatgcaggcatgatagcaaaaatggcgaggatggctctgtttgcgccacgccgatttttcttagcccagactggtgagctaaatatctttaataaacagcaggcaaatcatcgcaatacccaa                                                                                                                                    <  7:618300‑M1/143‑140 (MQ=255)

                                                                                                                                                                                                                                                                                 acataAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGCAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGATCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGttttt                                                                                                                            >  5:14968/1‑149 (MQ=255)

                                                                                                                                                                                                                                                                                 acataAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATTCTGAACTTTCTGATTGCCGCCGTTTTGTGGGGAAGTTCAGGGGTCTGCCCGCAATACATCATGGAGCAAACCCAGATGTCGTCTCAGttttt                                                                                                                            <  6:791707/149‑1 (MQ=255)

                                                                                                                                                                                                                                                                                 acataAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCa                                                                                                                                                                                 >  5:383177/1‑96 (MQ=255)

                                                                                                                                                                                                                                                                                 acataAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCa                                                                                                                                                                                 <  6:383177/96‑1 (MQ=255)

                                                                                                                                                                                                                                                                                 acataAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAgg                                                                                                                                                                               <  6:1092903/98‑1 (MQ=255)

                                                                                                                                                                                                                                                                                  cataAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGTTTTTg                                                                                                                           <  5:248204/149‑1 (MQ=255)

TTTTCAGGACTTGATGCCTGAAAAAATAGGCTCTGCGACAACGTTATATGCAAATACTTCACGCGTCGGCTGGATTATCGCCGGCTCTGTTGACGGAATTATGGTTGAAATCTGGAGCTACCATGCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGTTTTTGACTATGACGCGTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCG  >  NC_000913/3837942‑3838485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.