New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4404330 =167 (0.880)4 (0.020) 4/292 NT 2.5% intergenic (+26/‑56) hflC/yjeT HflB protease modulator specific for phage lambda cII repressor/DUF2065 family protein
?NC_000913 4404365 = 150 (0.810)intergenic (+61/‑21) hflC/yjeT HflB protease modulator specific for phage lambda cII repressor/DUF2065 family protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 198 total aligned reads displayed.

AAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCATTCAGTAAAGATCCGGACTTCTACGCATTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAATATTTTACGTCGTTTTGGCGGTGGACTTGTGGTTGCGGGCGTTGTGGTCTACTACATGTTGAGGAAAACGATTGGCTGAACAAAAAACAGA  >  NC_000913/4404066‑4404595
                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                         
aaGTGACCAGAACGCTGGCAGGAGAGGAGCGTCAGTGTCGCATAATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCATTCAGTAAAGATCCGGACTTCTACGCATACATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCCGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGc                                                                                                                                                                                                                                                                 <  1:125838/275‑1 (MQ=255)
  tggACCAGACCGCTGGCGGAAGCTGAGCGGCAGGGCCGAGGCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCGGATGCATTCAGTAAAGATCCGGACTTCTACGCAGTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGc                                                                                                                                                                                                                                                                 <  4:178564/271‑1 (MQ=255)
      ccAGAACGCTGGCAGAAACTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCATTCAGTAAAGATCCGGACTTCTACGCATTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCt                                                                                                                                                                                                                                                            <  2:389946/274‑1 (MQ=255)
         gAACGCTGGCAGAAGCTGGGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCATTCAGTAAAGATCCGGACTTCTACGCCTTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAgg                                                                                                                                                                                                                                                        <  4:646921/275‑1 (MQ=255)
                             agatagagCCGAATAATGCGTGGTGAAGTCGATGCCGAAGCAGCCAAACTTTTTCCTGATTCATTAAGGAAAGATCCGGACTTCTACGCATTCATCCGTAGCCGGCGGGCGTATGAGAACAGCTTCTCGGGAAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTGAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttcttt                                                                                                                                                                                                                                     <  4:147889/267‑1 (MQ=255)
                                       gCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCATTCAGTAAAGATCCTGACTTCTACGCATTCATCCGTAGCCTGCGTGCTTATGAGAACATCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGa                                                                                                                                                                                                                          <  2:205878/275‑1 (MQ=255)
                                                   gtgAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCATTCAGTAAAGATCCGGACTTCTACGCATTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCAGCTACATGAAGACGCCGACTTCCGCAACGCGTTAAGATAACGACTGCGGTACAGGTCAATAAAGCCACCGACTCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATaatgaatg                                                                                                                                                                                                                 >  2:162447/1‑272 (MQ=255)
                                                                                       aTGCATTCAGTAAAGATCCGGACTTCTACGCATTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTa                                                                                                                                                                          >  1:19951/1‑275 (MQ=255)
                                                                                                 tAAAGATCCGGACTTCTACGCATTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGCAGGtt                                                                                                                                                                >  2:26620/1‑275 (MQ=255)
                                                                                                      aTCCGGACTTCTACGCATTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAgg                                                                                                                                                            >  4:498519/1‑274 (MQ=255)
                                                                                                                    gCATTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATa                                                                                                                                                                                                                                                                           >  7:1043354/1‑149 (MQ=255)
                                                                                                                     taaaatattatcgggcaaattggtcatcgcagagatcatcttcttccatgccttcgggtaaagcatcggccctaaaccttccagtaccaaaaccagggcaagcgccagccagattgtcgaattcattcattatccttatagaaaaagaa                                                                                                                                                                                                                                                                          >  6:420473‑M1/148‑149 (MQ=255)
                                                                                                                      aaaatattatcgggcaaattggtcatcgcagagatcatcttcttccatgccttcgggtaaagcatcggccctaaaccttccagtaccaaaaccagggcaagcgccagccagattgtcgaattcattcattatccttatagaaaaagaaa                                                                                                                                                                                                                                                                         >  6:750017‑M1/147‑149 (MQ=255)
                                                                                                                      aaaatattatcgggcaaattggtcatcgcagagatcatcttcttccatgccttcgggtaaagcatcggccctaaaccttccagtaccaaaaccagggcaagcgccagccagattgtcgaattcattcattatccttatagaaaaagaaa                                                                                                                                                                                                                                                                         >  7:449318‑M1/147‑149 (MQ=255)
                                                                                                                      aTTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATaaa                                                                                                                                                                                                                                                                         >  6:278204/1‑149 (MQ=255)
                                                                                                                       ttCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAg                                                                                                                                                                                                                                                                        >  7:361494/1‑149 (MQ=255)
                                                                                                                                    tGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGa                                                                                                                                                                                                          >  4:607476/1‑198 (MQ=255)
                                                                                                                                      cGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAgat                                                                                                                           <  2:498519/275‑1 (MQ=255)
                                                                                                                                       gTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAgg                                                                                                                                                                                                                                                        <  6:350491/149‑1 (MQ=255)
                                                                                                                                       gTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAgg                                                                                                                                                                                                                                                        <  7:892922/149‑1 (MQ=255)
                                                                                                                                        tGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAggg                                                                                                                                                                                                                                                       >  5:165977/1‑149 (MQ=255)
                                                                                                                                        tGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAAt                                                                                                                                                                                                      <  2:607476/198‑1 (MQ=255)
                                                                                                                                              tGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCg                                                                                                                                                                                                                                                 >  6:543391/1‑149 (MQ=255)
                                                                                                                                               tcgcagagatcatcttcttccatgccttcgggtaaagcatcggccctaaaccttccagtaccaaaaccagggcaagcgccagccagattgtcgaattcattcattatccttatagaaaaagaa                                                                                                                                                                                                                                                                          >  5:451240‑M1/122‑123 (MQ=255)
                                                                                                                                                 gaACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCggtg                                                                                                                                                                                                                                              <  8:1043354/149‑1 (MQ=255)
                                                                                                                                                 gaACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCggtg                                                                                                                                                                                                                                              >  5:270548/1‑149 (MQ=255)
                                                                                                                                                  aaCAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCggtgg                                                                                                                                                                                                                                             >  8:1021013/1‑149 (MQ=255)
                                                                                                                                                    cAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGtt                                                                                                                                                                                                                                           <  7:219089/149‑1 (MQ=255)
                                                                                                                                                       cTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTg                                                                                                                                                                                   >  2:14134/1‑202 (MQ=255)
                                                                                                                                                       cTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTATTCTTTTTCTATAAGGATAATGAATGAATTCGAAAAACTGGCTGGAGCTAGNCCTGGTTTGGGTACTGGTAGGTTTAGGGCCGATGCTTTACCCGTAGGCAGGGAAGAAGATGAACTCTGAGGTGGCCa                                                                                                          >  3:144424/1‑275 (MQ=255)
                                                                                                                                                          ctctGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttcttt                                                                                                                                                                                                                                     <  8:361494/149‑1 (MQ=255)
                                                                                                                                                            ctGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttcttttt                                                                                                                                                                                                                                   <  7:489890/149‑1 (MQ=255)
                                                                                                                                                             tGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttctttttc                                                                                                                                                                                                                                  >  8:222356/1‑149 (MQ=255)
                                                                                                                                                               gCAATCAGGCAGTGATGTTCATGAGCCCGGATAGCGATGTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGcc                                                                                                   <  1:144424/274‑1 (MQ=255)
                                                                                                                                                                 aaTCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGc                                                                                                                                                                                                                                                                       >  5:385102/1‑108 (MQ=255)
                                                                                                                                                                  aTCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATaa                                                                                                                                                                                                                             <  5:857451/149‑1 (MQ=255)
                                                                                                                                                                   tCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAg                                                                                                                                                                                                                            >  7:125090/1‑149 (MQ=255)
                                                                                                                                                                     aGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGa                                                                                                                                                                                                                          >  7:888592/1‑149 (MQ=255)
                                                                                                                                                                       gACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATa                                                                                                                                                                                                                        >  8:54656/1‑149 (MQ=255)
                                                                                                                                                                       gACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATa                                                                                                                                                                                                                        >  8:200610/1‑149 (MQ=255)
                                                                                                                                                                       gACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATa                                                                                                                                                                                                                        >  8:989395/1‑149 (MQ=255)
                                                                                                                                                                        aCGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATaa                                                                                                                                                                                                                       >  6:397309/1‑149 (MQ=255)
                                                                                                                                                                         cGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATaat                                                                                                                                                                                                                      <  5:58748/149‑1 (MQ=255)
                                                                                                                                                                             aTGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATaatgaat                                                                                                                                                                                                                  >  7:468313/1‑149 (MQ=255)
                                                                                                                                                                             aTGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATaatgaat                                                                                                                                                                                                                  >  7:307287/1‑149 (MQ=255)
                                                                                                                                                                             aTGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATaatgaat                                                                                                                                                                                                                  <  7:1021013/149‑1 (MQ=255)
                                                                                                                                                                                gTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAAAGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAAtgaatgaa                                                                                                                                                                                                               >  7:753721/1‑149 (MQ=255)
                                                                                                                                                                                 aagcatcggccctaaaccttccagtaccaaaaccagggcaagcgccagccagattgtcgaattcattcattatccttatagaaaaagAAAGCCACCGCATCCTCAGGGATGTCGGTGGtttt                                                                                                                                                                                                                                         >  7:656648‑M1/88‑122 (MQ=255)
                                                                                                                                                                                 aagcatcggccctaaaccttccagtaccaaaaccagggcaagcgccagccagattgtcgaattcattcattatccttatagaaaaagAAAGCCACCGCATCCTCAGGGATGTCGGTGGtttt                                                                                                                                                                                                                                         <  8:656648‑M1/35‑1 (MQ=255)
                                                                                                                                                                                     gAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGttttctt                                                                                                                                                                                                                                      >  8:305223/1‑121 (MQ=255)
                                                                                                                                                                                     gAGCCCGGATAGCGATTTCTTCAGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGa                                                                                                                                                                                                          >  7:179912/1‑149 (MQ=255)
                                                                                                                                                                                       gCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAg                                                                                                                                                                                                                                                         >  5:992598/1‑100 (MQ=255)
                                                                                                                                                                                        cacGGATAGCGATTTCTTCCGCTACATGAAGGCGCCGACTTCCGCAACGCGTTAATATAATGACTGCGGTACATGTCAATAAAGCCACCGCATCCTCAGGTATGTCGGTGGTTGTCTTTTTCTATAAGGATAATGAATGAATTCGACaa                                                                                                                                                                                                       <  6:901422/147‑1 (MQ=255)
                                                                                                                                                                                          cGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACCGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATctggctg                                                                                                                                                                                               >  4:732456/1‑155 (MQ=255)
                                                                                                                                                                                           ggATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATct                                                                                                                                                                                                    <  8:75526/149‑1 (MQ=255)
                                                                                                                                                                                            gATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATctg                                                                                                                                                                                                   <  8:628641/149‑1 (MQ=255)
                                                                                                                                                                                             aTAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCa                                                                                                                                                                                                                                                          <  5:103766/93‑1 (MQ=255)
                                                                                                                                                                                                  gATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCtggctggc                                                                                                                                                                                             <  7:272092/149‑1 (MQ=255)
                                                                                                                                                                                                    tttCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGgcgc                                                                                                                                                                                           >  5:684000/1‑149 (MQ=255)
                                                                                                                                                                                                       cttcCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTg                                                                                                                                                                                        <  6:648433/149‑1 (MQ=255)
                                                                                                                                                                                                           cGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCt                                                                                                                                                                                    <  8:166836/149‑1 (MQ=255)
                                                                                                                                                                                                                 aTGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGtttt                                                                                                                                                                              >  8:775032/1‑149 (MQ=255)
                                                                                                                                                                                                                  tGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGTCAATCTGGCTGGCGCTTGCCCTGGTTTTg                                                                                                                                                                             <  7:925781/149‑1 (MQ=255)
                                                                                                                                                                                                                  tGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTg                                                                                                                                                                             <  7:157404/149‑1 (MQ=255)
                                                                                                                                                                                                                            gACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCa                                                                                                                                      <  2:736746/178‑1 (MQ=255)
                                                                                                                                                                                                                               ttCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGtt                                                                                                                                                                <  5:207197/149‑1 (MQ=255)
                                                                                                                                                                                                                               ttCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGtt                                                                                                                                                                <  6:450300/149‑1 (MQ=255)
                                                                                                                                                                                                                               ttCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGtt                                                                                                                                                                >  6:207197/1‑149 (MQ=255)
                                                                                                                                                                                                                                   gCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGTTGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAgg                                                                                                                                                            >  7:390212/1‑149 (MQ=255)
                                                                                                                                                                                                                                        gcgTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCt                                                                                                                                                                                          <  4:269273/114‑1 (MQ=255)
                                                                                                                                                                                                                                        gcgTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGa                                                                                                                                                       <  8:949209/149‑1 (MQ=255)
                                                                                                                                                                                                                                         cgTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGAt                                                                                                                                                      <  7:239286/149‑1 (MQ=255)
                                                                                                                                                                                                                                             aaTATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCtt                                                                                                                                                  <  6:711482/149‑1 (MQ=255)
                                                                                                                                                                                                                                               tataACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTa                                                                                                                                                <  6:1101668/149‑1 (MQ=255)
                                                                                                                                                                                                                                               tataACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTa                                                                                                                                                >  5:1010806/1‑149 (MQ=255)
                                                                                                                                                                                                                                               tataACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTa                                                                                                                                                <  5:543391/149‑1 (MQ=255)
                                                                                                                                                                                                                                                 taACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTAcc                                                                                                                                              >  7:750173/1‑149 (MQ=255)
                                                                                                                                                                                                                                                 taACGACAGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTAGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGTCAATCTGGCTGGCGCTTTCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTAcc                                                                                                                                              >  6:544359/1‑149 (MQ=255)
                                                                                                                                                                                                                                                  aaCGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTAccc                                                                                                                                             >  7:859917/1‑149 (MQ=255)
                                                                                                                                                                                                                                                  aaCGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTAccc                                                                                                                                             >  6:361120/1‑149 (MQ=255)
                                                                                                                                                                                                                                                   aCGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCt                                                                                                                                                                                          >  2:699117/1‑103 (MQ=255)
                                                                                                                                                                                                                                                   aCGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGtttt                                                                                                                                                                              <  8:462114/115‑1 (MQ=255)
                                                                                                                                                                                                                                                    cGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAATATTTTACGTCGTTTTGGCGGTGGACTTGTGGTTGCGGGCg                                                    >  4:419469/1‑236 (MQ=255)
                                                                                                                                                                                                                                                      aCTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAg                                                                                                                                         <  5:80301/149‑1 (MQ=255)
                                                                                                                                                                                                                                                        tGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGc                                                                                                                                       <  7:989395/149‑1 (MQ=255)
                                                                                                                                                                                                                                                        tGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAATATTTTACGTCGTTTTGGCGGTGGACTTGTGGTTGCGGGCGTtgt                                                <  2:419469/236‑1 (MQ=255)
                                                                                                                                                                                                                                                          cGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAatat                                                                                          >  1:98468/1‑192 (MQ=255)
                                                                                                                                                                                                                                                              aCAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAAGCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAATATTTTACGTCGTTTTGGCGGTGGACTTGTGGTTGCGGGCGTTGTGGt                                             <  1:137774/233‑1 (MQ=255)
                                                                                                                                                                                                                                                               cAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGACCTCTGCGATGACCAATTTGCCCGATAATATTTTACGTCGTTTTGGCGGTGGCATTGTGGTTGCGGGCGTTGTGGTCTACTACATGTTGAGGACAACGATGGCGTGAACCAAAAACAGa  >  4:129517/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                  gTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGaagaag                                                                                                                             >  6:580850/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                  gTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGaagaag                                                                                                                             >  8:748076/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                  gTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGaagaag                                                                                                                             >  5:880774/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                   tCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTg                                                                                                                                                                             >  8:864378/1‑100 (MQ=255)
                                                                                                                                                                                                                                                                   tCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAagaaga                                                                                                                            >  5:658883/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                   tCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAagaaga                                                                                                                            >  7:688303/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                      aTAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTAc                                                                                                                                                                         >  7:549078/1‑101 (MQ=255)
                                                                                                                                                                                                                                                                       tAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTgg                                                                                                                                                                            <  6:63300/97‑1 (MQ=255)
                                                                                                                                                                                                                                                                       tAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTgg                                                                                                                                                                            >  5:63300/1‑97 (MQ=255)
                                                                                                                                                                                                                                                                       tAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAgatgat                                                                                                                        <  8:390212/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                        AAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGAtc                                                                                                                       <  5:352612‑M1/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                         
AAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCATTCAGTAAAGATCCGGACTTCTACGCATTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAATATAACGACTGCGGTACAGGTCAATAAAGCCACCGCATCCTCAGGGATGTCGGTGGTTTTCTTTTTCTATAAGGATAATGAATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAATATTTTACGTCGTTTTGGCGGTGGACTTGTGGTTGCGGGCGTTGTGGTCTACTACATGTTGAGGAAAACGATTGGCTGAACAAAAAACAGA  >  NC_000913/4404066‑4404595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.