New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3619878 =NA (NA)9 (0.050) 7/280 NT 100% coding (687/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 3619892 = 0 (0.000)coding (701/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGG  >  NC_000913/3619619‑3620161
                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                             
ccgggtggcgtccagccatagcgcaccagcggcgcggcaggtaaatgctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcagggtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTc                                                                                                                                                                                                                                                                              <  1:119936‑M2/2‑1 (MQ=255)
         gtccacccaaagtgaaccagcgggccggaaggtaaattctccggggattccgggtcgtgcgtcagccaaacggcagacagagggatgccgttggcccggccatattcggtgtaacccggcagggtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCACCGGCGTg                                                                                                                                                                                                                                                                     <  4:325553‑M2/11‑1 (MQ=255)
           ccagccatagcgcaccagcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcagggtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCACCGGCGTGa                                                                                                                                                                                                                                                                    <  2:41845‑M2/12‑1 (MQ=255)
                          cagcagcgcggcaggtaagttctccgggtattccgggtcgtacgtcgtccacacggcagacagacggatgccgttgtcccggccatattcggtgtgacccggcagggtatcagaaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgcccggcaccatccgtcacgccggtgatttcgccgctgaatTCACCGGCGTGACGGATGGTGCCGGGCg                                                                                                                                                                                                                                                    <  2:251781‑M2/28‑1 (MQ=255)
                           accggggcgggagtgaaattctccgggtattccgggccgggcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcagggtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCACCGGCGTGACGGATGGTGCCTGGCGt                                                                                                                                                                                                                                                   <  2:361068‑M2/29‑1 (MQ=255)
                                                                                                                             cggcagggtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatt                                                                                                                                                                                                                                                                               >  5:180752‑M2/149‑149 (MQ=255)
                                                                                                                              ggcagggtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTc                                                                                                                                                                                                                                                                              >  7:143319‑M2/148‑149 (MQ=255)
                                                                                                                                cagggtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCAc                                                                                                                                                                                                                                                                            <  7:247543‑M2/4‑1 (MQ=255)
                                                                                                                                cagggtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCAc                                                                                                                                                                                                                                                                            <  7:281085‑M2/4‑1 (MQ=255)
                                                                                                                                cagggtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCAc                                                                                                                                                                                                                                                                            <  8:1076217‑M2/4‑1 (MQ=255)
                                                                                                                                cagggtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCACCGGCGTGACGGATGGTGCCTg                                                                                                                                                                                                                                                       >  2:312562‑M2/146‑170 (MQ=255)
                                                                                                                                 agggtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCAcc                                                                                                                                                                                                                                                                           <  7:815786‑M2/5‑1 (MQ=255)
                                                                                                                                  gggtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCACCg                                                                                                                                                                                                                                                                          <  8:282024‑M2/6‑1 (MQ=255)
                                                                                                                                  gggtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCACCg                                                                                                                                                                                                                                                                          >  8:660122‑M2/144‑149 (MQ=255)
                                                                                                                                    gtatcagtaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCACCGGc                                                                                                                                                                                                                                                                        <  6:243437‑M2/8‑1 (MQ=255)
                                                                                                                                    gtatcaggaaaagcggacggttccgtcccgccggaagtggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgattttgccgctgaatTCACCGGc                                                                                                                                                                                                                                                                        <  6:200652‑M2/8‑1 (MQ=255)
                                                                                                                                    gtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCACCGGc                                                                                                                                                                                                                                                                        <  7:1000606‑M2/8‑1 (MQ=255)
                                                                                                                                    gtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCACCGGCGTGACGGATGGTGCCTGGCGt                                                                                                                                                                                                                                                   <  4:312562‑M2/29‑1 (MQ=255)
                                                                                                                                    gtatcaggaaaagcggacggttccatcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCACCGGc                                                                                                                                                                                                                                                                        <  5:94803‑M2/8‑1 (MQ=255)
                                                                                                                                     tatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCACCGGCg                                                                                                                                                                                                                                                                       >  5:363430‑M2/141‑149 (MQ=255)
                                                                                                                                     tatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCACCGGCg                                                                                                                                                                                                                                                                       <  8:60565‑M2/9‑1 (MQ=255)
                                                                                                                                               agcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatt                                                                                                                                                                                                                                                                               >  2:190870‑M2/131‑131 (MQ=255)
                                                                                                                                                   gacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCAcc                                                                                                                                                                                                                                                                           <  4:190870‑M2/5‑1 (MQ=255)
                                                                                                                                                          ccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTCACCGGCGTGACGGATGGTGCCTGGCGTc                                                                                                                                                                                                                                                  >  4:728979‑M2/120‑149 (MQ=255)
                                                                                                                                                                                                 cccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccaaccgtcacgccggtgaattcagcggcgaaaTCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCTCAGCGGGAAGAAGAAGCCCGGCAGACGGCCATTTCCGGCGGGACGGAACCGGCCGCTTTTACTGATACCCTGCCGGGTTACACCGAAAATGGcc                                                                                                                       >  2:204957‑M2/81‑233 (MQ=255)
                                                                                                                                                                                                                                 aagtgacgccaggcaccatccgtcacgccggtgaattcagcggcgaaaTCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCggg                                                                                                                                                                           >  2:728979‑M2/49‑149 (MQ=255)
                                                                                                                                                                                                                                                             cggtgatttcgccgctgaatTCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGgc                                                                                                                                                                                                                      >  7:503432‑M2/21‑78 (MQ=255)
                                                                                                                                                                                                                                                             cggtgatttcgccgctgaatTCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGgc                                                                                                                                                                                                                      <  8:503432‑M2/58‑1 (MQ=255)
                                                                                                                                                                                                                                                                             gaagTCACCGGGTGGACGGATGGTGCCGGGCGTAACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCgg  <  2:263637‑M2/270‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 TCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAatat                                                                                                                           <  5:629967‑M2/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 TCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAatat                                                                                                                           >  8:438018‑M2/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                             
GCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGG  >  NC_000913/3619619‑3620161

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.