| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3819511 = | 442 (3.680) | 14 (0.130) | 9/242 | NT | 3.4% | coding (1660/1683 nt) | ligB | DNA ligase, NAD(+)‑dependent |
| ? | NC_000913 | 3819537 = | 381 (3.410) | coding (1634/1683 nt) | ligB | DNA ligase, NAD(+)‑dependent | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATGCCAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3819666‑3819511‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcccagcTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGGGTT > NC_000913/3819537‑3819683 ATGCCAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCT < 4:621198/149‑1ATGCCAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCT > 1:608678/1‑149 GCCAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGC > 3:376971/1‑149 CCAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCC < 3:1024760/149‑1 CCAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCC > 2:561498/1‑149 CCAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCC > 1:905471/1‑149 CCAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCC < 4:629305/149‑1 CCAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCC > 1:957689/1‑149 CCAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCC > 4:923242/1‑149 CAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCATTTCTGGCAGCAGCTGCCGCGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAAGAAAATGCGCAAATCAAGACGCTGTGCAGTTGGCTGGATGCCC > 4:142657/1‑149 CAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCCC > 4:413797/1‑149 CAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCCC > 3:1050094/1‑149 CAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCCC > 2:511209/1‑149 CAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCCC > 1:282941/1‑149 CAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCCC < 4:271134/149‑1 CAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCCC < 1:667613/149‑1 AGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCCCA < 2:474682/149‑1 AGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCCCA < 1:753419/149‑1 CTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGC < 1:806501/149‑1 GTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGC > 3:597696/1‑119 GTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGC < 4:597696/119‑1 CAAGAAGCTGGGCAGTTGGCTGGCTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGT > 2:507423/1‑149 GAAGCTGGGCAGTTGGCTGGCTGCCCAGCTTATTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCGCGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGCCCAGGACCGTTCA > 3:665025/1‑149 GCTGGGCAGTTGGCTGGCTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCA > 2:412368/1‑149 TGGGCAGTTGGCTGGCTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTTCTAAATAACAGTGGCGACCAGGACCGTTCGTAACT > 3:306395/1‑149 TGGGCAGTTGGCTGGCTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCTCT > 2:864664/1‑149 TGGGCAGTTGGCTGGCTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACT > 2:109973/1‑149 GGGCAGTTGGCTGGCTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTACCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTG > 2:718177/1‑149 GGGCAGTTGGCTGGCTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAAT > 4:1051186/1‑55 GGGCAGTTGGCTGGCTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAAT < 3:1051186/55‑1 GGGCAGTTCGCTGGCTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTG > 2:859356/1‑149 TGGCTGGCTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAA < 2:806501/149‑1 CTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGC < 3:875531/149‑1 CTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGC < 1:92709/149‑1 TGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCC > 3:522578/1‑149 TGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCC > 3:646079/1‑149 TGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCC > 1:1032182/1‑149 GCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATCACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCC < 4:956107/149‑1 cgAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGG > 4:741676/3‑149 CCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAGTAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGG < 1:372513/149‑1 CCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGG > 1:280828/1‑149 CCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGG > 3:65590/1‑149 CCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGG > 3:356005/1‑149 CCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGG > 2:123979/1‑149 CCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGG > 2:109899/1‑149 CCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGG < 1:507423/149‑1 CAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGGG > 3:840895/1‑149 CAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAA < 4:430388/104‑1 CAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGCCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCCCCGTGCTAAATAAAA > 3:430388/1‑104 AGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAATCGCCGCCCGGGT > 3:1059750/1‑149 AGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGGGT < 2:416779/149‑1 GCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGTGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGGGTT > 3:614943/1‑149 GCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGGGTT > 4:469591/1‑149 GCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGGGTT > 4:969246/1‑149 ATGCCAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3819666‑3819511‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcccagcTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTGCTAAATAAAAGTTGCGACCAGGACCGTTCATCACTGGCATTAAGCGCCGCCCGGGTT > NC_000913/3819537‑3819683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |