BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2604981 =	123 (1.020)	6 (0.050)	7/242	NT	5.0%	coding (171/1440 nt)	hyfD	hydrogenase 4, membrane subunit
*	?	NC_000913	2605003 =	112 (1.000)	6 (0.050)	7/242	NT	5.0%	coding (193/1440 nt)	hyfD	hydrogenase 4, membrane subunit

Only 100 of 148 total aligned reads displayed.

GTTATTGCTGCCTTTTATCGGCGCACTGGTCGTTTCGTTTTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATCTGACGGATAAAAATCGCGAAC  >  NC_000913/2604834‑2605129

attcgtgccgttatgcgggtgttcgcgatttttatccgtcagataacccgtggagtagatcgtgaccagcaaaccgagaaacaccaccacaaacagaatcagcgtactcacgcgatcaatgaccaggccaaacaacgccacatccccCa                                                                                                                                                     <  4:313329‑M1/2‑1 (MQ=255)

 ttcgtgccgttatgcgggtgttcgcgatttttatccgtcagataacccgtggagtagatcgtgaccagcaaaccgagaaacaccaccacaaacagaatcagcgtactcacgcgatcaatgaccaggccaaacaacgccacatccccCac                                                                                                                                                    >  1:57597‑M1/147‑149 (MQ=255)

 ttcgtgccgttatgcgggtgttcgcgatttttatccgtcagataacccgtggagtagatcgtgaccagcaaaccgagaaacaccaccacaaacagaatcagcgtactcacgcgatcaatgaccaggccaaacaacgccacatccccCac                                                                                                                                                    <  1:631290‑M1/3‑1 (MQ=255)

     tgccgttatgcgggtgttcgcgatttttatccgtcagataacccgtggagtagatcgtgaccagcaaaccgagaaacaccaccacaaacagaatcagcgtactcacgcgatcaatgaccaggccaaacaacgccacatccccCacgttg                                                                                                                                                <  4:537381‑M1/7‑1 (MQ=255)

     tgacgttatgcgggtgttcgcgatttttatccgtcagataacccgtggagtagatcgtgaccagcaaaccgagaaacaccaccacaaacagaatcagcgtactcacgcgatcaatgaccaggccaaacaacgccacatccccCacgttg                                                                                                                                                >  2:414388‑M1/143‑149 (MQ=255)

      gccgttatgcgggtgttcgcgatttttatccgtcagataacccgtggagtagatcgtgaccagcaaaccgagaaacaccaccacaaacagaatcagcgtactcacgcgatcaatgaccaggccaaacaacgccacatccccCacgttga                                                                                                                                               >  2:174751‑M1/142‑149 (MQ=255)

           cTTTTATCGGCGCACTGGTCGTTTCGTTTTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATATTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCacgttgacgttg                                                                                                                                          <  4:180171/149‑1 (MQ=255)

                    gcgcACTGGTCGTTTCGTTTTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTg                                                                                                                                 >  2:420534/1‑149 (MQ=255)

                    gcgcACTGGTCGTTTCGTTTTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTg                                                                                                                                 >  3:235665/1‑149 (MQ=255)

                     ttcgcgatttttatccgtcagataacccgtggagtagatcgtgaccagcaaaccgagaaacaccaccacaaacagaatcagcgtactcacgcgatcaatgaccaggccaaacaacgccacatccccCACGTTGACGTTGGTCAACGTgg                                                                                                                                >  4:20332‑M1/127‑149 (MQ=255)

                      gcACTGGTCGTTTCGTTTTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACCAACGTCAACGTgac                                                                                                                               <  1:43358/149‑3 (MQ=255)

                       cACTGGTCGTTTCGTTTTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTgggg                                                                                                                              <  2:272646/149‑1 (MQ=255)

                        aCTGGTCGTTTCGTTTTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTggggg                                                                                                                             >  3:811259/1‑149 (MQ=255)

                          tGGTCGTTTCGTTTTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCacgttga                                                                                                                                               >  1:320360/1‑129 (MQ=255)

                          tGGTCGTTTCGTTTTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCacgttga                                                                                                                                               <  2:320360/129‑1 (MQ=255)

                             tcgtttcgttTTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCTGTCACGTTGACGTTGGTCAACGTGGGGGAtgtg                                                                                                                        >  4:212924/1‑149 (MQ=255)

                               gtttcgtttTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTggg                                                                                                                               <  4:828136/140‑1 (MQ=255)

                               gtttcgtttTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTggg                                                                                                                               >  3:828136/1‑140 (MQ=255)

                                tttcgtttTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCg                                                                                                                     >  4:289779/1‑149 (MQ=255)

                                    gtttTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGAtg                                                                                                                          >  2:450443/1‑140 (MQ=255)

                                    gtttTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGAtg                                                                                                                          <  1:450443/140‑1 (MQ=255)

                                     ttttCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCgttgtt                                                                                                                >  1:246604/1‑149 (MQ=255)

                                      tttCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGttt                                                                                                               <  3:693977/149‑1 (MQ=255)

                                      tttCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGttt                                                                                                               >  1:116978/1‑149 (MQ=255)

                                      tttCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCGGTGCAGGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCCACGTGGGGGATGTGGCGTTGttt                                                                                                               <  2:275077/149‑1 (MQ=255)

                                       ttCGCCACCACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTg                                                                                                              <  2:873427/149‑1 (MQ=255)

                                       ttCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTg                                                                                                              <  4:615388/149‑1 (MQ=255)

                                       ttCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTg                                                                                                              <  2:155965/149‑1 (MQ=255)

                                       ttCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTg                                                                                                              <  2:913408/149‑1 (MQ=255)

                                        tCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCac                                                                                                                                                    >  4:758082/1‑110 (MQ=255)

                                          gCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCgttgtt                                                                                                                >  2:318228/1‑144 (MQ=255)

                                          gCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCgttgtt                                                                                                                <  1:318228/144‑1 (MQ=255)

                                           ccACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCt                                                                                                          <  4:293663/149‑1 (MQ=255)

                                           ccACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCt                                                                                                          >  1:706971/1‑149 (MQ=255)

                                            cacaACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTAGCGTTGTTTGGCCTg                                                                                                         <  2:130315/149‑1 (MQ=255)

                                               aaCGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTc                                                                                                      >  3:992706/1‑149 (MQ=255)

                                                      ggCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATc                                                                                               >  3:831453/1‑149 (MQ=255)

                                                          gccgAATGGGGGGTTTTGTTCGCCGTGCTGCCCACGCTGTGCATGTTGTCTCTTTTCTCCGCGTTTTATCCGGCCGATAAAGTTGCCGTAACGTTGACGTTGGTCAACGTAGGGGATGTGCCGTTGTTTGGCCTGGTCATTGATCGCGt                                                                                           <  2:673575/149‑1 (MQ=255)

                                                          gccgAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGt                                                                                           <  2:540300/149‑1 (MQ=255)

                                                           ccgAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTg                                                                                          <  3:1042985/149‑1 (MQ=255)

                                                               aTGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTa                                                                                      <  4:953835/149‑1 (MQ=255)

                                                                      gTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACACTGAt                                                                               >  2:715487/1‑149 (MQ=255)

                                                                        tttGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTc                                                                             >  4:740936/1‑149 (MQ=255)

                                                                          cgagaaacaccaccacaaacagaatcagcgtactcacgcgatcaatgaccaggccaaacaacgccacatccccCACGTTGACGTTGGTCAACGTggg                                                                                                                               >  1:959081‑M1/74‑97 (MQ=255)

                                                                           gTTGGCCGCGCTGACGACGCTGTGCATGTTGTCACTGATCCCCGCGTTTTATCAGGGCGATAAAGTTGCGGTCTCGGTGTCGTTGGTCTAGTTGGGGGAGGTGGCGTTGTTTGGCCTGGTCATTGATCGCTGGAGTGCGCTGATTCTGt                                                                          <  2:216278/149‑1 (MQ=255)

                                                                            ttCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGtt                                                                         >  3:922261/1‑149 (MQ=255)

                                                                            ttCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGtt                                                                         >  3:600110/1‑149 (MQ=255)

                                                                             tCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGttt                                                                        <  3:666684/149‑1 (MQ=255)

                                                                               gccgcGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTtgt                                                                      <  1:898837/149‑1 (MQ=255)

                                                                                ccgcGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTtgtg                                                                     >  2:734098/1‑149 (MQ=255)

                                                                                ccgcGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTtgtg                                                                     <  3:289779/149‑1 (MQ=255)

                                                                                 cgcgCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTgtgg                                                                    <  3:752824/149‑1 (MQ=255)

                                                                                  gcgcTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTgtggt                                                                   >  3:255233/1‑149 (MQ=255)

                                                                                    gcTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTttggtg                                                                  <  4:301395/148‑1 (MQ=255)

                                                                                    gcTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTgtggtg                                                                  >  3:301395/1‑148 (MQ=255)

                                                                                        aCCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCacgttgacgttg                                                                                                                                          <  3:361099/72‑1 (MQ=255)

                                                                                         ccACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCGCGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGttt                                                            <  2:342993/149‑1 (MQ=255)

                                                                                          cACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTtc                                                           >  1:835100/1‑149 (MQ=255)

                                                                                                    aTGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGt                                                                                           <  4:1070361/107‑1 (MQ=255)

                                                                                                    aTGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGt                                                                                           >  3:1070361/1‑107 (MQ=255)

                                                                                                          tCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCAtt                                                                                                   <  1:62776/93‑1 (MQ=255)

                                                                                                          tCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGt                                                                                           >  1:332409/1‑101 (MQ=255)

                                                                                                          tCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGt                                                                                           <  2:332409/101‑1 (MQ=255)

                                                                                                            aCTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCt                                                                                                          <  3:754769/84‑1 (MQ=255)

                                                                                                            aCTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGa                                         <  1:724835/149‑1 (MQ=255)

                                                                                                            aCTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGa                                         >  4:860605/1‑149 (MQ=255)

                                                                                                            aCTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGa                                         >  4:710865/1‑149 (MQ=255)

                                                                                                             cTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGAt                                        <  2:224906/149‑1 (MQ=255)

                                                                                                             cTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGAt                                        <  1:798779/149‑1 (MQ=255)

                                                                                                              tGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATc                                       <  3:317001/149‑1 (MQ=255)

                                                                                                                   tcCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACt                                   <  2:877821/148‑1 (MQ=255)

                                                                                                                   tcCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTc                                  >  1:422422/1‑149 (MQ=255)

                                                                                                                   tcCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTCGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGtt                                                                         <  3:782021/110‑1 (MQ=255)

                                                                                                                   tcCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGAAGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGtt                                                                         >  4:782021/1‑110 (MQ=255)

                                                                                                                   tcCGCGTTTTATCACGCCGATAAAGTTGCCGCCACGTTGCCGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCTCGTGAGTACGCTGATCCCGTGTGTGGTGGTGGTTCTCGGTTTGCTGGTCACGATCTACTc                                  >  1:749178/1‑149 (MQ=255)

                                                                                                                     cgcgTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCa                                >  4:990776/1‑149 (MQ=255)

                                                                                                                     cgcgTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCa                                >  1:711839/1‑149 (MQ=255)

                                                                                                                     cgcgTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCa                                >  2:631290/1‑149 (MQ=255)

                                                                                                                      gcgTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGCACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCAc                               >  1:414895/1‑149 (MQ=255)

                                                                                                                        gTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACgg                             <  2:625401/149‑1 (MQ=255)

                                                                                                                         ttttATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACggg                            >  1:765814/1‑149 (MQ=255)

                                                                                                                          tttATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTg                                                <  1:181731/128‑1 (MQ=255)

                                                                                                                          ccaggccaaacaacgccacatccccCACGTTGACGTTGGTCAAc                                                                                                                                    >  1:56729‑M1/26‑44 (MQ=255)

                                                                                                                          ccaggccaaacaacgccacatccccCACGTTGACGTTGGTCAAc                                                                                                                                    <  2:56729‑M1/19‑1 (MQ=255)

                                                                                                                              tCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATc                       >  2:599036/1‑149 (MQ=255)

                                                                                                                              tCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATc                       >  4:587966/1‑149 (MQ=255)

                                                                                                                              tCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATc                       <  3:596164/149‑1 (MQ=255)

                                                                                                                                aGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATCTg                     >  1:858628/1‑149 (MQ=255)

                                                                                                                                aGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTAGTCACGATCTACTCCACGGGTTATCTg                     >  2:423546/1‑149 (MQ=255)

                                                                                                                                aGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGT‑GGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATCTGa                    <  3:176076/149‑1 (MQ=255)

                                                                                                                                 ggCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATCTGa                    <  3:990776/149‑1 (MQ=255)

                                                                                                                                 ggCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATCTGa                    >  4:234280/1‑149 (MQ=255)

                                                                                                                                 ggCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATCTGa                    >  3:445758/1‑149 (MQ=255)

                                                                                                                                          cacatccccCACGTTGACCAACGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGt                                                                                           >  4:647574‑M1/10‑69 (MQ=255)

                                                                                                                                           gTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATCTGACGGATaaaaa          <  2:761570/149‑1 (MQ=255)

                                                                                                                                             tgctgTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATCTGACGGATAAAAATc        <  3:212924/145‑1 (MQ=255)

                                                                                                                                              gCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATCTGACGGATAAAAATcg       >  2:722425/1‑149 (MQ=255)

                                                                                                                                                 gTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATCTGACGGATAAAAATCGCGa    >  4:148949/1‑149 (MQ=255)

                                                                                                                                                 ccCACGTTGACCAACGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCg                                                        >  2:959081‑M1/3‑97 (MQ=255)

                                                                                                                                                  tCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATCTGACGGATAAAAATCGCGaa   <  1:354303/149‑1 (MQ=255)

GTTATTGCTGCCTTTTATCGGCGCACTGGTCGTTTCGTTTTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATCTGACGGATAAAAATCGCGAAC  >  NC_000913/2604834‑2605129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.