New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3091089 =79 (0.660)5 (0.040) 5/242 NT 6.0% intergenic (+35/‑45) endA/rsmE DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase, SAM‑dependent
?NC_000913 3091113 = 82 (0.730)intergenic (+59/‑21) endA/rsmE DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase, SAM‑dependent

Only 100 of 123 total aligned reads displayed.

AACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATGG  >  NC_000913/3090941‑3091236
                                                                                                                                                    |                                                                                                                                                   
aaCAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTAC                                                                                                                                                     <  2:768175‑M1/149‑1 (MQ=255)
 caattgagacgcctgccccggccccatgcgcagtacgcgcccgatatggttggcggcatcttcgcaaagcgcgatgtgagaatggctggtcagtggttcaggatgataaatgcgggggatacgcatagttaaaaatccgcgtcgtctcc                                                                                                                                                    <  2:872941‑M1/2‑1 (MQ=255)
  cAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAATGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCC                                                                                                                                                   <  2:786158‑M1/149‑1 (MQ=255)
   aaGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCC                                                                                                                                                  <  4:728674‑M1/149‑1 (MQ=255)
    ttgcaacgcctgccccggccccatgcgcagtacgcgcccgatatggttggcggcatcttcgcaaagcgcgatgtgagaatggctggtcagtggttcaggatgataaatgcgggggatacgcatagttaaaaatccgcgtcgtctCCCCa                                                                                                                                                 <  3:951966‑M1/5‑1 (MQ=255)
    aGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAATGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCA                                                                                                                                                 >  4:17520‑M1/1‑149 (MQ=255)
    aGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTGCCCCA                                                                                                                                                 >  3:796716‑M1/1‑149 (MQ=255)
     tgcaacgcctgccccggccccatgcgcagtacgcgcccgatatggttggcggcatcttcgcaaagcgcgatgtgagaatggctggtcagtggttcaggatgataaatgcgggggatacgcatagttaaaaatccgcgtcgtctCCCCAc                                                                                                                                                <  3:242324‑M1/6‑1 (MQ=255)
             cGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACaa                                                                                                                                        >  3:227026/1‑149 (MQ=255)
                    cGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGgttgtacgcgtg                                                                                                                                 >  2:1102365‑M1/1‑137 (MQ=255)
                    cGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGgttgtacgcgtg                                                                                                                                 <  3:1033197‑M1/149‑13 (MQ=255)
                     gACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACcgcgtgg                                                                                                                                >  4:16793‑M2/1‑142 (MQ=255)
                     gACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACcgcgtgg                                                                                                                                >  4:330892‑M2/1‑142 (MQ=255)
                      aCTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGgttgtacgcgtggg                                                                                                                               <  1:154632‑M1/149‑15 (MQ=255)
                      aCTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACcgcgtggg                                                                                                                               >  1:950063‑M2/1‑141 (MQ=255)
                       cccatgcgcagtacgcgcccgatatggttggcggcatcttcgcaaagcgcgatgtgagaatggctggtcagtggttcaggatgataaatgcgggggatacgcatagttaaaaatccgcgtcgtctCCCCACGCGTACAACCGCGTgggg                                                                                                                              >  3:902497‑M1/126‑149 (MQ=255)
                         gggAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGgag                                                                                                                            <  3:402936/149‑1 (MQ=255)
                         gggAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGgag                                                                                                                            >  1:877907/1‑149 (MQ=255)
                          ggAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGgaga                                                                                                                           >  4:585878/1‑149 (MQ=255)
                          ggAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGgaga                                                                                                                           <  1:725252/149‑1 (MQ=255)
                            aGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGgttgtacgcgtggggtaggg                                                                                                                         <  4:1049608‑M1/149‑21 (MQ=255)
                             gTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAgacga                                                                                                                        <  1:702629/149‑1 (MQ=255)
                              tGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAgacgac                                                                                                                       >  4:243846/1‑149 (MQ=255)
                                cGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGAcgc                                                                                                                     <  1:966424/149‑1 (MQ=255)
                                cGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGAcgc                                                                                                                     <  2:643004/149‑1 (MQ=255)
                                  aGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCgg                                                                                                                   >  3:411582/1‑149 (MQ=255)
                                   gcgcGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGGTTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGAAGACGACGCGGa                                                                                                                  >  1:227266/1‑149 (MQ=255)
                                     gcgATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAgacgac                                                                                                                       <  1:797400/142‑1 (MQ=255)
                                     gcgATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAgacgac                                                                                                                       >  2:797400/1‑142 (MQ=255)
                                                      aaGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGAGTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATcc                                                                                               <  1:10116/149‑1 (MQ=255)
                                                             aGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCAt                                                                                        >  4:1017566/1‑149 (MQ=255)
                                                             aGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCAt                                                                                        >  4:281110/1‑149 (MQ=255)
                                                              gggCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCAtt                                                                                       <  3:785717/149‑1 (MQ=255)
                                                                gCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTa                                                                                     <  2:364579/149‑1 (MQ=255)
                                                                gCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTa                                                                                     >  4:1041200/1‑149 (MQ=255)
                                                                gCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTa                                                                                     >  2:1000970/1‑149 (MQ=255)
                                                                  aaTCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatc                                                                                   <  1:1090730/149‑1 (MQ=255)
                                                                   aTCATAACCCGTATGTGCAACGCTCTTGCCAGGCGCGAAACAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatca                                                                                  <  4:865079/149‑1 (MQ=255)
                                                                    tCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACcgcgtg                                                                                                                                 >  4:615435‑M2/1‑95 (MQ=255)
                                                                    tCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACcgcgtg                                                                                                                                 <  3:615435‑M2/101‑7 (MQ=255)
                                                                    tCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatcat                                                                                 <  2:865338/149‑1 (MQ=255)
                                                                     cATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatcatc                                                                                <  1:668157/149‑1 (MQ=255)
                                                                     cATAACCCGTATGTGCAACGCGCTTGCCAAGCGCGAAAGAACTAACCTACACTTGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatcatc                                                                                <  2:44142/149‑1 (MQ=255)
                                                                       tAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTaa                                                                                                           >  3:380612/1‑120 (MQ=255)
                                                                       tAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTaa                                                                                                           <  4:380612/120‑1 (MQ=255)
                                                                          cccGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTCCACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGaa                                                                           <  4:227026/149‑1 (MQ=255)
                                                                          cccGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGaa                                                                           <  2:724733/149‑1 (MQ=255)
                                                                           ccGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAAc                                                                          >  2:374950/1‑149 (MQ=255)
                                                                                 gtgCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGa                                                                    <  2:1024351/149‑1 (MQ=255)
                                                                                   gCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatcatc                                                                                >  4:487544/1‑135 (MQ=255)
                                                                                   gCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatcatc                                                                                <  3:487544/135‑1 (MQ=255)
                                                                                     aaCGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAg                                                                >  2:366987/1‑149 (MQ=255)
                                                                                     aaCGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAg                                                                >  1:441984/1‑149 (MQ=255)
                                                                                     aaCGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAg                                                                >  1:166843/1‑149 (MQ=255)
                                                                                        gcgcTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCa                                                             >  4:1077016/1‑149 (MQ=255)
                                                                                            ttGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATtct                                                         >  3:992131/1‑149 (MQ=255)
                                                                                               ccAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTcac                                                      <  4:710912/149‑1 (MQ=255)
                                                                                                cAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTa                                                                                                            <  2:67750/94‑1 (MQ=255)
                                                                                                cAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTa                                                                                                            >  1:67750/1‑94 (MQ=255)
                                                                                                cAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTcaca                                                     >  1:55608/1‑149 (MQ=255)
                                                                                                  ggCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTaa                                                                                                           >  3:659500/1‑93 (MQ=255)
                                                                                                  ggCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTaa                                                                                                           <  4:659500/93‑1 (MQ=255)
                                                                                                       gAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGgttgtacgcgtggggtaggg                                                                                                                         <  2:1042696‑M1/74‑21 (MQ=255)
                                                                                                       gAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGgttgtacgcgtggggtaggg                                                                                                                         >  1:1042696‑M1/1‑54 (MQ=255)
                                                                                                       gAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGgttgtacgcgtggggtagg                                                                                                                          >  4:74989‑M1/1‑54 (MQ=255)
                                                                                                       gAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGgttgtacgcgtggggtagg                                                                                                                          <  3:74989‑M1/73‑20 (MQ=255)
                                                                                                         aaGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCttt                                            <  1:756146/149‑1 (MQ=255)
                                                                                                          agagCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAG‑CATTCTCACATCGCGCTTTGc                                          <  1:415783/149‑1 (MQ=255)
                                                                                                             gCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGa                                        >  3:906427/1‑149 (MQ=255)
                                                                                                              cTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGaa                                       <  3:770007/149‑1 (MQ=255)
                                                                                                              cTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGaa                                       <  1:643847/149‑1 (MQ=255)
                                                                                                              cTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGaa                                       <  3:242466/149‑1 (MQ=255)
                                                                                                                 aCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGAt                                    <  1:1000970/149‑1 (MQ=255)
                                                                                                                   cTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATgc                                  >  2:1077361/1‑149 (MQ=255)
                                                                                                                    aacacTAGGGGGATTCTTTTTGTTACCCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTACCCCCCGCTTTTATCATCCTGAACCACTGACCAGCCATTCCCACATCGCGTTTTGCGAAGATgcc                                 <  2:877907/148‑1 (MQ=255)
                                                                                                                         tAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCt                                              >  4:965077/1‑131 (MQ=255)
                                                                                                                         tAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCaa                            <  4:778616/149‑1 (MQ=255)
                                                                                                                         tAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCaa                            <  1:374950/149‑1 (MQ=255)
                                                                                                                           gcatagttaaaaatccgcgtcgtctCCCCACGCGTACAACCGCGTggg                                                                                                                               >  1:440654‑M1/26‑48 (MQ=255)
                                                                                                                           gcatagttaaaaatccgcgtcgtctCCCCACGCGTACAACCGCGTggg                                                                                                                               <  2:440654‑M1/23‑1 (MQ=255)
                                                                                                                             gggATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGTGAAGATGCCGCCAACCat                        <  3:1017566/149‑1 (MQ=255)
                                                                                                                             gggATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCat                        >  2:438700/1‑149 (MQ=255)
                                                                                                                              gggttCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAGCTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCata                       <  2:227266/146‑1 (MQ=255)
                                                                                                                                         gTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTa            <  3:975897/149‑1 (MQ=255)
                                                                                                                                           gcgtcgtctCCCCACGCGGTTGTACGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGaa                                       >  2:602994‑M1/10‑120 (MQ=255)
                                                                                                                                             aCCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGAt                                                                                                                 <  3:950939/44‑1 (MQ=255)
                                                                                                                                             aCCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGAt                                                                                                                 >  4:950939/1‑44 (MQ=255)
                                                                                                                                             aCCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatca                                                                                  <  1:757781/75‑1 (MQ=255)
                                                                                                                                             aCCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatca                                                                                  >  2:757781/1‑75 (MQ=255)
                                                                                                                                               cccTACCCCACGCGTACAACcgcgtggggtaggggttaacaaaaagaatcccgctagtgtaggttagctctttc                                                                                 <  2:1042696‑M2/74‑55 (MQ=255)
                                                                                                                                               cccTACCCCACGCGTACAACcgcgtggggtaggggttaacaaaaagaatcccgctagtgtaggttagctctttc                                                                                 >  1:1042696‑M2/1‑20 (MQ=255)
                                                                                                                                               cccTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGACGATGCCGCCAACCATATCGGGCGCGTACTgcgc      >  3:191725/1‑149 (MQ=255)
                                                                                                                                               cccTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTgcgc      >  2:542120/1‑149 (MQ=255)
                                                                                                                                                ccTACCCCACGCGTACAACcgcgtggggtaggggttaacaaaaagaatcccgctagtgtaggttagctctttc                                                                                 >  4:74989‑M2/1‑19 (MQ=255)
                                                                                                                                                ccTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCa     >  3:73024/1‑149 (MQ=255)
                                                                                                                                                ccTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCa     >  3:753711/1‑149 (MQ=255)
                                                                                                                                                 cTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATtctc                                                        >  2:24172/1‑97 (MQ=255)
                                                                                                                                                 cTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATtctc                                                        <  1:24172/97‑1 (MQ=255)
                                                                                                                                                 cTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCAt    <  4:628120/149‑1 (MQ=255)
                                                                                                                                                  tACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATg   <  3:585878/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
AACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATGG  >  NC_000913/3090941‑3091236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.