BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3838216	379 (3.160)	4 (0.040)	4/244	NT	1.1%	intergenic (+79/‑32)	setC/yicL	putative arabinose efflux transporter/EamA family inner membrane putative transporter
*	?	NC_000913	= 3838231	388 (3.440)	4 (0.040)	4/244	NT	1.1%	intergenic (+94/‑17)	setC/yicL	putative arabinose efflux transporter/EamA family inner membrane putative transporter
Rejected: Frequency below/above cutoff threshold.

Only 100 of 490 total aligned reads displayed.

GTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGTTTTTG  >  NC_000913/3838068‑3838364

       tggctggcGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACg                                                                                                                                               >  2:844556/1‑149 (MQ=255)

           tggcGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACaa                                                                                                                                           >  3:717812/1‑149 (MQ=255)

             gcGATAGGGATGTTGGGTATTGTGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACaaaa                                                                                                                                         <  4:403796/149‑1 (MQ=255)

             gcGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACaaaa                                                                                                                                         <  2:158442/149‑1 (MQ=255)

               gATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACa                                                                                                                                       <  3:412385/149‑1 (MQ=255)

                 tAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgt                                                                                                                                     >  3:9703‑M2/1‑147 (MQ=255)

                  aGGGATGTTGGGTATTGCGATGATCTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgta                                                                                                                                    >  2:720147‑M2/1‑146 (MQ=255)

                   gggATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtat                                                                                                                                   >  1:788041‑M2/1‑145 (MQ=255)

                    ggATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtatg                                                                                                                                  <  2:1028528‑M2/149‑6 (MQ=255)

                    ggATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgt                                                                                                                                     <  1:328847‑M2/146‑3 (MQ=255)

                    ggATGTTGGGTATTGCGATGATTTGCCAGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgt                                                                                                                                     >  2:328847‑M2/1‑144 (MQ=255)

                     gATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtatgc                                                                                                                                 >  2:966021‑M2/1‑143 (MQ=255)

                       tGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtatgcag                                                                                                                               <  2:623930‑M2/149‑9 (MQ=255)

                       tGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtatgcag                                                                                                                               >  3:308386‑M2/1‑141 (MQ=255)

                         ttGGGTATTGTGATGATTTGCCTGCTGTGTATTAAAGATATTTAGCTCACCAGTCGGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACACAACAGTATGCagag                                                                                                                             <  2:44930/149‑1 (MQ=255)

                         ttGGGTATCGCGATGATTCGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCagag                                                                                                                             <  4:712421/149‑1 (MQ=255)

                           gggTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtat                                                                                                                                   <  4:208418‑M2/141‑5 (MQ=255)

                           gggTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtat                                                                                                                                   >  3:208418‑M2/1‑137 (MQ=255)

                              tATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGaaa                                                                                                                        >  4:542355/1‑149 (MQ=255)

                                  gCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATg                                                                                                                    <  3:558298/149‑1 (MQ=255)

                                   cgatactttGCCTGCTATTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATgg                                                                                                                   <  1:893544/143‑1 (MQ=255)

                                   cGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATgg                                                                                                                   <  4:106839/149‑1 (MQ=255)

                                    gatgatTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATggg                                                                                                                  >  2:252057/1‑149 (MQ=255)

                                    gatgatTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATggg                                                                                                                  <  4:181791/149‑1 (MQ=255)

                                       gatTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTc                                                                                                               >  3:250826/1‑149 (MQ=255)

                                            gCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTccacca                                                                                                          <  1:244357/149‑1 (MQ=255)

                                               tgctgTTTATTAAAGATATTTAGCTGACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGaa                                                                                                       >  2:992928/1‑149 (MQ=255)

                                               tgctgTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGaa                                                                                                       >  1:351272/1‑149 (MQ=255)

                                                gctgTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGaaa                                                                                                      <  1:932234/149‑1 (MQ=255)

                                                 ctgTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAg                                                                                                     <  3:666512/149‑1 (MQ=255)

                                                  tgTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAgg                                                                                                    >  3:465830/1‑149 (MQ=255)

                                                  tgTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAgg                                                                                                    <  3:857869/149‑1 (MQ=255)

                                                   gTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAggg                                                                                                   >  2:81015/1‑149 (MQ=255)

                                                   gTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAggg                                                                                                   >  2:575695/1‑149 (MQ=255)

                                                    tttATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAgggg                                                                                                  >  2:118290/1‑149 (MQ=255)

                                                    tttATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAgggg                                                                                                  <  1:968065/149‑1 (MQ=255)

                                                     ttattaAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGa                                                                                                 <  1:1077370/149‑1 (MQ=255)

                                                      tattaAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGAt                                                                                                <  2:1076983/149‑1 (MQ=255)

                                                      tattaAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGAt                                                                                                <  1:118290/149‑1 (MQ=255)

                                                        ttaAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGc                                                                                              >  1:562874/1‑149 (MQ=255)

                                                            aGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGaa                                                                                          >  2:946304/1‑149 (MQ=255)

                                                             gATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCagag                                                                                                                             <  4:858058/113‑1 (MQ=255)

                                                                 tttAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTc                                                                                     <  1:844556/149‑1 (MQ=255)

                                                                    aGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGa                                                                                  <  4:659742/149‑1 (MQ=255)

                                                                     gCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGAt                                                                                 >  3:147832/1‑149 (MQ=255)

                                                                       tCACCAGTCTGGGCTAAGTAAAATCGGCGTGGCGCAAACAGAGCGATGCTCGCCATTTCGGCTATCATGCCTGGATACATAAACGACAAATTGTTATGTAGAGGGTAATATGGGTTCCACCAGAAAATGGATTCTGAACGTTCTGAttt                                                                               >  2:560828/1‑148 (MQ=255)

                                                                        cACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTgc                                                                              >  2:695517/1‑149 (MQ=255)

                                                                         aCCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACTGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGc                                                                                              <  3:697281/132‑1 (MQ=255)

                                                                                tGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCgtgt                                                                      <  2:278810/149‑1 (MQ=255)

                                                                                 gggCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGtgtt                                                                     >  2:751799/1‑149 (MQ=255)

                                                                                    cTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAACGGGGATGCTGAACGTTCTGATTGCCGCCGTGTtgtg                                                                  <  4:912440/149‑1 (MQ=255)

                                                                                    cTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTtgtg                                                                  >  1:459781/1‑149 (MQ=255)

                                                                                     tAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTgg                                                                 <  2:347010/149‑1 (MQ=255)

                                                                                     tAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTgg                                                                 >  1:266858/1‑149 (MQ=255)

                                                                                        gAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCgt                                                                        <  1:419202/139‑1 (MQ=255)

                                                                                         aaaaaaCGGCGGGGCCAAAACAAAGCCCACCTCGCCATTTTTGCTATCATGCCTGCATAAAAAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCAACAGAAAGGGGAAGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGaa                                                             <  2:837030/149‑1 (MQ=255)

                                                                                         aaaaaTCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGaa                                                             <  3:913909/149‑1 (MQ=255)

                                                                                         aaaaaTCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGaa                                                             <  4:616717/149‑1 (MQ=255)

                                                                                             aTCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTc                                                         >  2:612196/1‑149 (MQ=255)

                                                                                                 gCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAggg                                                     <  1:1014278/149‑1 (MQ=255)

                                                                                                       cgcAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTgc                                               >  3:378402/1‑149 (MQ=255)

                                                                                                       cgcAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTgc                                               <  2:531651/149‑1 (MQ=255)

                                                                                                        gcAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGaa                                                             >  2:909481/1‑134 (MQ=255)

                                                                                                              agagCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAAt                                        >  4:788643/1‑149 (MQ=255)

                                                                                                               gagCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATa                                       <  1:612196/149‑1 (MQ=255)

                                                                                                                 gCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATAca                                     >  4:245847/1‑149 (MQ=255)

                                                                                                                  ccATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATAcat                                    >  1:99837/1‑149 (MQ=255)

                                                                                                                    aTCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACa                                                                                                                                       <  2:209330/48‑1 (MQ=255)

                                                                                                                     tCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATAcatcat                                 >  3:582373/1‑149 (MQ=255)

                                                                                                                        tCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGa                              <  1:882339/149‑1 (MQ=255)

                                                                                                                          gCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAgtatgcaggcatgatagcaaaaatggcgaggatggctctgtttgcgccacgccgatttttcttagcccagactggtga                                                         <  3:927834‑M2/120‑79 (MQ=255)

                                                                                                                           ccATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCa                           >  4:281437/1‑149 (MQ=255)

                                                                                                                             aTTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATa                                       <  1:659572/135‑1 (MQ=255)

                                                                                                                             aTTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATa                                       >  2:659572/1‑135 (MQ=255)

                                                                                                                             aTTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCaaa                         >  4:1044702/1‑149 (MQ=255)

                                                                                                                             aTTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCaaa                         <  3:776354/149‑1 (MQ=255)

                                                                                                                             aTTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCaaa                         <  2:416649/149‑1 (MQ=255)

                                                                                                                                tttGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGcc                      <  1:695517/149‑1 (MQ=255)

                                                                                                                                     tATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAgg                                                      >  1:181573/1‑112 (MQ=255)

                                                                                                                                     tATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATg                 >  3:122252/1‑149 (MQ=255)

                                                                                                                                      aTCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAggg                                                     >  3:1074168/1‑112 (MQ=255)

                                                                                                                                         aTGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATgtcgt             <  1:204825/149‑1 (MQ=255)

                                                                                                                                         aTGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATgtcgt             >  3:637409/1‑149 (MQ=255)

                                                                                                                                          tGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATgtcgtc            <  3:528021/149‑1 (MQ=255)

                                                                                                                                               gCATACtgttttgtcgtttatgtatgcaggcatgatagcaaaaatggcgaggatggctctgtttgcgccacgccgatttttcttagcccagactggtgagctaaatatctttaataaacagcaggcaaatcatcgcaatacccaacatc       <  1:51760‑M1/149‑144 (MQ=255)

                                                                                                                                               gCATACtgttttgtcgtttatgtatgcaggcatgatagcaaaaatggcgaggatggctctgtttgcgccacgccgatttttcttagcccagactggtgagctaaatatctttaataaacagcaggcaaatcatcgcaatacccaacatc       <  1:382685‑M1/149‑144 (MQ=255)

                                                                                                                                               gCATACtgttttgtcgtttatgtatgcaggcatgatagcaaaaatggcgaggatggctctgtttgcgccacgccgatttttcttagcccagactggtgagctaaatatctttaataaacagcaggcaaatcatcgcaatacccaacatc       >  2:876784‑M1/1‑6 (MQ=255)

                                                                                                                                               gCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGt       >  1:1037453/1‑149 (MQ=255)

                                                                                                                                                cATACtgttttgtcgtttatgtatgcaggcatgatagcaaaaatggcgcggatggctctgtttgcgccacgccgatttttcttagcccagactggtgagctaaatatctttaataaacagcaggcaaatcatcgcaatacccaacatcc      <  4:355098‑M1/149‑145 (MQ=255)

                                                                                                                                                cATACtgttttgtcgtttatgtatgcaggcatgatagcaaaaatggcgaggatggctctgtttgcgccacgccgatttttcttagcccagactggtgagctaaatatctttaataaacagcaggcaaatcatcgcaatgcccaacatcc      <  4:153566‑M1/149‑145 (MQ=255)

                                                                                                                                                cATACtgttttgtcgtttatgtatgcaggcatgatagcaaaaatggcgaggatggctctgtttgcgccacgccgatttttcttagcccagactggtgagctaaatatctttaataaacagcaggcaaatcatcgcaatacccaacatcc      >  4:12562‑M1/1‑5 (MQ=255)

                                                                                                                                                 atacataAACGACAAAACAGTATGCAGAGGTAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGttt     >  1:811722/1‑149 (MQ=255)

                                                                                                                                                 atacataAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGttt     >  4:438035/1‑149 (MQ=255)

                                                                                                                                                 atacataAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGttt     >  4:521441/1‑149 (MQ=255)

                                                                                                                                                 aTACtgttttgtcgtttatgtatgcaggcatgatagcaaaaatggcgaggatggctctgtttgcgccacgccgatttttcttagcccagactggtgagctaaatatctttaataaacagcaggcaaatcatcgcaatacccaa           <  3:618300‑M1/143‑140 (MQ=255)

                                                                                                                                                  tacataAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAAAACATCATGGAGCAAAGCCAGATGTCGTCGCAGtttt    >  4:732381/1‑149 (MQ=255)

                                                                                                                                                   acataAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATTCTGAACTTTCTGATTGCCGCCGTTTTGTGGGGAAGTTCAGGGGTCTGCCCGCAATACATCATGGAGCAAACCCAGATGTCGTCTCAGttttt   <  2:791707/149‑1 (MQ=255)

                                                                                                                                                   acataAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGttttt   >  2:134161/1‑149 (MQ=255)

                                                                                                                                                   aCtgttttgtcgtttatgtatgcaggcatgatagcaaaaatggcgaggatggctctgtttgcgccacgccgatttttcttagcccagactggtgagctaaatatctttaataaacagcaggcaaatcatcgcaatacccaacatc       <  4:945465‑M1/145‑144 (MQ=255)

                                                                                                                                                    cataAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGTTTTTg  <  1:128140/149‑1 (MQ=255)

GTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAGCTCACCAGTCTGGGCTAAGAAAAATCGGCGTGGCGCAAACAGAGCCATCCTCGCCATTTTTGCTATCATGCCTGCATACATAAACGACAAAACAGTATGCAGAGGGAAAAATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGTTTTTG  >  NC_000913/3838068‑3838364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.