BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3091097	87 (0.720)	9 (0.080)	7/242	NT	9.9%	intergenic (+43/‑37)	endA/rsmE	DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase, SAM‑dependent
*	?	NC_000913	= 3091103	82 (0.730)	9 (0.080)	7/242	NT	9.9%	intergenic (+49/‑31)	endA/rsmE	DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase, SAM‑dependent

Only 100 of 117 total aligned reads displayed.

GGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATGGGGCCGGGGCAGGC  >  NC_000913/3090955‑3091249

 gTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACc                                                                                                                                                   >  2:1036446‑M2/1‑148 (MQ=255)

       gACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACcgcgtgg                                                                                                                                             >  4:16793‑M2/1‑142 (MQ=255)

       gACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACcgcgtgg                                                                                                                                             >  4:330892‑M2/1‑142 (MQ=255)

        aCTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACcgcgtggg                                                                                                                                            >  1:950063‑M2/1‑141 (MQ=255)

           gggAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGgag                                                                                                                                         >  1:877907/1‑149 (MQ=255)

            ggAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGgaga                                                                                                                                        <  1:725252/149‑1 (MQ=255)

               gTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAgacga                                                                                                                                     <  1:702629/149‑1 (MQ=255)

                  cGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGAcgc                                                                                                                                  <  2:643004/149‑1 (MQ=255)

                  cGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGAcgc                                                                                                                                  <  1:966424/149‑1 (MQ=255)

                    aGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCgg                                                                                                                                >  3:411582/1‑149 (MQ=255)

                     gcgcGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGGTTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGAAGACGACGCGGa                                                                                                                               >  1:227266/1‑149 (MQ=255)

                       gcgATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAgacgac                                                                                                                                    <  1:797400/142‑1 (MQ=255)

                         gATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGAtttt                                                                                                                           >  3:859787/1‑149 (MQ=255)

                                        aaGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGAGTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATcc                                                                                                            <  1:10116/149‑1 (MQ=255)

                                          ggTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATcccc                                                                                                          <  3:53461/149‑1 (MQ=255)

                                               aGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCAt                                                                                                     >  4:1017566/1‑149 (MQ=255)

                                               aGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCAt                                                                                                     >  4:281110/1‑149 (MQ=255)

                                                gggCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCAtt                                                                                                    <  3:785717/149‑1 (MQ=255)

                                                  gCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTa                                                                                                  <  2:364579/149‑1 (MQ=255)

                                                  gCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTa                                                                                                  >  4:1041200/1‑149 (MQ=255)

                                                  gCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTa                                                                                                  >  2:1000970/1‑149 (MQ=255)

                                                    aaTCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatc                                                                                                <  1:1090730/149‑1 (MQ=255)

                                                     aTCATAACCCGTATGTGCAACGCTCTTGCCAGGCGCGAAACAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatca                                                                                               <  4:865079/149‑1 (MQ=255)

                                                      tCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACcgcgtg                                                                                                                                              <  3:615435‑M2/101‑7 (MQ=255)

                                                      tCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACcgcgtg                                                                                                                                              >  4:615435‑M2/1‑95 (MQ=255)

                                                      tCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatcat                                                                                              <  2:865338/149‑1 (MQ=255)

                                                       cATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatcatc                                                                                             <  1:668157/149‑1 (MQ=255)

                                                       cATAACCCGTATGTGCAACGCGCTTGCCAAGCGCGAAAGAACTAACCTACACTTGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatcatc                                                                                             <  2:44142/149‑1 (MQ=255)

                                                         tAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTaa                                                                                                                        >  3:380612/1‑120 (MQ=255)

                                                         tAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTaa                                                                                                                        <  4:380612/120‑1 (MQ=255)

                                                            cccGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTCCACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGaa                                                                                        <  4:227026/149‑1 (MQ=255)

                                                            cccGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGaa                                                                                        <  2:724733/149‑1 (MQ=255)

                                                             ccGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAAc                                                                                       >  2:374950/1‑149 (MQ=255)

                                                                   gtgCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGa                                                                                 <  2:1024351/149‑1 (MQ=255)

                                                                     gCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatcatc                                                                                             <  3:487544/135‑1 (MQ=255)

                                                                     gCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatcatc                                                                                             >  4:487544/1‑135 (MQ=255)

                                                                          gcgcTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCa                                                                          >  4:242324/1‑149 (MQ=255)

                                                                          gcgcTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCa                                                                          >  4:1077016/1‑149 (MQ=255)

                                                                              ttGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATtct                                                                      >  4:770007/1‑149 (MQ=255)

                                                                              ttGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATtct                                                                      >  3:992131/1‑149 (MQ=255)

                                                                                 ccAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTcac                                                                   <  4:710912/149‑1 (MQ=255)

                                                                                  cAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTa                                                                                                                         <  2:67750/94‑1 (MQ=255)

                                                                                  cAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTa                                                                                                                         >  1:67750/1‑94 (MQ=255)

                                                                                  cAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTcaca                                                                  >  1:55608/1‑149 (MQ=255)

                                                                                    ggCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTaa                                                                                                                        <  4:659500/93‑1 (MQ=255)

                                                                                    ggCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATc                                                                >  2:21459/1‑149 (MQ=255)

                                                                                           aaGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCttt                                                         <  1:756146/149‑1 (MQ=255)

                                                                                            agagCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAG‑CATTCTCACATCGCGCTTTGc                                                       <  1:415783/149‑1 (MQ=255)

                                                                                               gCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGa                                                     >  3:906427/1‑149 (MQ=255)

                                                                                                cTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGaa                                                    <  3:770007/149‑1 (MQ=255)

                                                                                                cTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGaa                                                    <  1:643847/149‑1 (MQ=255)

                                                                                                cTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGaa                                                    <  3:242466/149‑1 (MQ=255)

                                                                                                  aaCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGa                                                  >  1:368937/1‑149 (MQ=255)

                                                                                                   aCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGAt                                                 <  1:1000970/149‑1 (MQ=255)

                                                                                                     cTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATgc                                               >  2:850773/1‑149 (MQ=255)

                                                                                                      aacacTAGGGGGATTCTTTTTGTTACCCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTACCCCCCGCTTTTATCATCCTGAACCACTGACCAGCCATTCCCACATCGCGTTTTGCGAAGATgcc                                              <  2:877907/148‑1 (MQ=255)

                                                                                                           tAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCt                                                           >  4:965077/1‑131 (MQ=255)

                                                                                                           tAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCt                                                           <  3:965077/131‑1 (MQ=255)

                                                                                                           tAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCaa                                         <  4:778616/149‑1 (MQ=255)

                                                                                                           tAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCaa                                         <  1:374950/149‑1 (MQ=255)

                                                                                                             gcatagttaaaaatccgcgtcgtctCCCCACGCGTACAACCGCGTggg                                                                                                                                            >  1:440654‑M1/26‑48 (MQ=255)

                                                                                                             gcatagttaaaaatccgcgtcgtctCCCCACGCGTACAACCGCGTggg                                                                                                                                            <  2:440654‑M1/23‑1 (MQ=255)

                                                                                                               gggATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCat                                     >  2:438700/1‑149 (MQ=255)

                                                                                                                gggttCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAGCTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCata                                    <  2:227266/146‑1 (MQ=255)

                                                                                                                 gATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCatat                                   >  4:665897/1‑149 (MQ=255)

                                                                                                                   ttCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCg                                 >  3:185370/1‑149 (MQ=255)

                                                                                                                      tttttGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGgc                              >  1:872941/1‑149 (MQ=255)

                                                                                                                           gTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTa                         <  3:975897/149‑1 (MQ=255)

                                                                                                                             gcgtcgtctCCCCACGCGGTTGTACGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGaa                                                    >  2:602994‑M1/10‑120 (MQ=255)

                                                                                                                             gcgtcgtctCCCCACGCGGTTGTACGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGaa                                                    <  1:602994‑M1/111‑1 (MQ=255)

                                                                                                                               aCCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGAt                                                                                                                              >  4:950939/1‑44 (MQ=255)

                                                                                                                               aCCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGAt                                                                                                                              <  3:950939/44‑1 (MQ=255)

                                                                                                                               aCCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatca                                                                                               <  1:757781/75‑1 (MQ=255)

                                                                                                                               aCCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTatca                                                                                               >  2:757781/1‑75 (MQ=255)

                                                                                                                                 cccTACCCCACGCGTACAACcgcgtggggtaggggttaacaaaaagaatcccgctagtgtaggttagctctttcgcgcctggcaagcgcgttgcacatacgggttatgattgccctgcaccttcgcgatgcgttcatcgcgctcgcact                   <  4:1049608‑M2/149‑130 (MQ=255)

                                                                                                                                 cccTACCCCACGCGTACAACcgcgtggggtaggggttaacaaaaagaatcccgctagtgtaggttagctctttc                                                                                              >  1:1042696‑M2/1‑20 (MQ=255)

                                                                                                                                 cccTACCCCACGCGTACAACcgcgtggggtaggggttaacaaaaagaatcccgctagtgtaggttagctctttc                                                                                              <  2:1042696‑M2/74‑55 (MQ=255)

                                                                                                                                 cccTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGACGATGCCGCCAACCATATCGGGCGCGTACTgcgc                   >  3:191725/1‑149 (MQ=255)

                                                                                                                                 cccTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTgcgc                   >  2:542120/1‑149 (MQ=255)

                                                                                                                                  ccTACCCCACGCGTACAACcgcgtggggtaggggttaacaaaaagaatcccgctagtgtaggttagctctttc                                                                                              <  3:74989‑M2/73‑55 (MQ=255)

                                                                                                                                  ccTACCCCACGCGTACAACcgcgtggggtaggggttaacaaaaagaatcccgctagtgtaggttagctctttc                                                                                              >  4:74989‑M2/1‑19 (MQ=255)

                                                                                                                                  ccTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCa                  >  3:753711/1‑149 (MQ=255)

                                                                                                                                  ccTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCa                  >  3:73024/1‑149 (MQ=255)

                                                                                                                                  ccTACCCCACGCGTACAACCGCGGGGGGAGACGACGCGGATTTTTACCTCTGCGTATCCCCCGCATTTATCATCCTGAACCACTGCCCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCa                  >  4:381684/1‑149 (MQ=255)

                                                                                                                                   cTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATtctc                                                                     >  2:24172/1‑97 (MQ=255)

                                                                                                                                   cTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATtctc                                                                     <  1:24172/97‑1 (MQ=255)

                                                                                                                                   cTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCAt                 <  4:628120/149‑1 (MQ=255)

                                                                                                                                    tACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATg                <  3:585878/149‑1 (MQ=255)

                                                                                                                                     aCCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATgg               <  2:368937/149‑1 (MQ=255)

                                                                                                                                       cccACGCGTACAACcgcgtggggtaggggttaacaaaaagaatcccgctagtgtaggttagctctttcgcgcctggcaagcgcgttgcacatacgggttatgattgccctgcaccttcgcgatgcgttcatcgcgctcgcactcccagt             <  1:154632‑M2/149‑136 (MQ=255)

                                                                                                                                        ccACGCGTACAACcgcgtggggtaggggttaacaaaaagaatcccgctagtgtaggttagctctttcgcgcctggcaagcgcgttgcacatacgggttatgattgccctgcaccttcgcgatgcgttcatcgcgctcgcactcccagtc            <  1:1102365‑M2/149‑137 (MQ=255)

                                                                                                                                        CCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTca                                                                    >  3:1028670‑M1/1‑93 (MQ=255)

                                                                                                                                         cACGCGTACAACcgcgtggggtaggggttaacaaaaagaatcccgctagtgtaggttagctctttcgcgcctggcaagcgcgttgcacatacgggttatgattgccctgcaccttcgcgatgcgttcatcgcgctcgcactcccagtcg           >  2:1102365‑M2/1‑12 (MQ=255)

                                                                                                                                         cACGCGTACAACcgcgtggggtaggggttaacaaaaagaatcccgctagtgtaggttagctctttcgcgcctggcaagcgcgttgcacatacgggttatgattgccctgcaccttcgcgatgcgttcatcgcgctcgcactcccagtcg           <  3:1033197‑M2/149‑138 (MQ=255)

                                                                                                                                          ACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATGGGGCCg          <  2:602064‑M1/149‑1 (MQ=255)

                                                                                                                                          ACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATGGGGCCg          <  2:359585‑M1/149‑1 (MQ=255)

                                                                                                                                           CGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCGCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATGGGGCCgg         >  2:909974‑M1/1‑149 (MQ=255)

                                                                                                                                                  aaCCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCgg                                >  4:456723/1‑119 (MQ=255)

                                                                                                                                                  aaCCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCgg                                <  3:456723/119‑1 (MQ=255)

                                                                                                                                                    ccGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATGGGGCCGGGGCAGGc  >  2:891603/1‑147 (MQ=255)

GGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACCGCGTGGGGAGACGACGCGGATTTTTAACTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATGGGGCCGGGGCAGGC  >  NC_000913/3090955‑3091249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.