| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,918,916 | T→A | 5.5% | K314N (AAA→AAT) | atpA ← | F1 sector of membrane‑bound ATP synthase, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,918,916 | 0 | T | A | 5.5% | 477.6 / 8.3 | 139 | K314N (AAA→AAT) | atpA | F1 sector of membrane‑bound ATP synthase, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base T (57/73); new base A (4/4); total (62/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 147 total aligned reads displayed.
CCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGTAAGCAACAGCCTGTT > NC_000913/3918770‑3919064 | ccGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCttt > 2:521299/1‑149 (MQ=255)ccGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCttt < 2:572985/149‑1 (MQ=255)ccGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCttt < 3:1999/149‑1 (MQ=255) gCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGt > 4:582963/1‑149 (MQ=255) ttGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGaa < 3:234544/149‑1 (MQ=255) tGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAg < 3:459891/149‑1 (MQ=255) tGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCAAAGGTGAAg < 2:852407/149‑1 (MQ=255) tGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCAAAGGTGAAg < 4:1005793/149‑1 (MQ=255) aGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTc < 1:1039022/149‑1 (MQ=255) aGGTTGGTTTCCAGGAAGAGCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCAAAGGTGAAgtgaaa < 4:283726/149‑6 (MQ=255) gttggttTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCaa < 4:693658/149‑1 (MQ=255) gttggttTCCAGGAAGATCTGACCATCGGGAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCaa > 3:877894/1‑149 (MQ=255) gttagtcTCGAGGCAGATCTGACCCTCGGTATTGGAGACTACGTTGGCCGGAACGAACGCAGAAACATCACCAGCCTGAGTTTTGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTGCACTTCACCGTTGGTGAGGGCTTCaa > 2:376997/1‑149 (MQ=255) ttggttTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTg > 2:612260/1‑135 (MQ=255) tggttTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACg < 3:749141/149‑1 (MQ=255) tttCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTAt > 3:33813/1‑149 (MQ=255) tttCCAGGAAGATCTGACCATCGGTAATGGACATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCAGCAGTGCGGTCAGAGAACCGTTTTTCCCTTTCGCTTCACCTTTGGTGAAGGCTTCAACGTAt > 3:666899/1‑149 (MQ=255) tCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTc > 1:154708/1‑149 (MQ=255) aGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGc > 3:809512/1‑149 (MQ=255) aGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGc > 2:926485/1‑149 (MQ=255) gAAGTTCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAGGGCTTCAACGTATTCGGCGt > 4:1073339/1‑149 (MQ=255) gAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGt > 1:193965/1‑149 (MQ=255) aaGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGtt < 1:293756/149‑1 (MQ=255) gATCTGACCATCGGTAATGGAGATTACGTTGGTCAGAACGAACGCAGAAACGTAACCCGCCTGAGCTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTaa < 2:777278/149‑1 (MQ=255) tCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAaca < 1:859586/149‑1 (MQ=255) aCCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTg < 2:127598/149‑1 (MQ=255) cATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTgca < 3:582963/149‑1 (MQ=255) cATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTgca < 4:441098/149‑1 (MQ=255) cATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTgca > 3:359892/1‑149 (MQ=255) aTGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTc > 4:219746/1‑149 (MQ=255) tGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTcc < 3:889849/149‑1 (MQ=255) ggAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCca < 1:729289/149‑1 (MQ=255) aTTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCcagcag < 1:885277/149‑1 (MQ=255) ttACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGa < 2:418404/149‑1 (MQ=255) ttACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGa > 3:570301/1‑149 (MQ=255) tACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGAc < 2:187497/149‑1 (MQ=255) cGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTCAACACGTGCAGCACGCTCCAGCAGACga < 3:927612/149‑1 (MQ=255) ttGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCAAAGGTGAAgt > 2:324849/1‑99 (MQ=255) tGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGagag < 4:223905/149‑1 (MQ=255) tGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGagag < 3:50721/149‑1 (MQ=255) tCGGAACGAACGCAGAAACGTCACCCGCGTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAAACGGTTTTCCCTTTTACTTCACCTCTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGAAGAGAGTgg > 4:409642/1‑149 (MQ=255) tCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGGGAGCgg > 4:441630/1‑149 (MQ=255) ggAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAg > 3:994755/1‑149 (MQ=255) ggAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAg < 3:1005865/149‑1 (MQ=255) gaacgaacGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAgg > 4:1057448/1‑149 (MQ=255) gaacgaacGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAgg > 2:203070/1‑149 (MQ=255) gCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCttt < 4:893040/77‑1 (MQ=255) aGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGt > 1:989020/1‑149 (MQ=255) aGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGt > 1:464634/1‑149 (MQ=255) aGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGt < 1:521299/149‑1 (MQ=255) gAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTc < 3:937999/149‑1 (MQ=255) gAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTc < 3:785768/149‑1 (MQ=255) gTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCg > 4:756550/1‑149 (MQ=255) aCCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGa > 1:154997/1‑149 (MQ=255) cccGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGaa < 1:434791/149‑1 (MQ=255) ccGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTc > 3:490062/1‑76 (MQ=255) ccGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTCTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAAt > 2:169400/1‑149 (MQ=255) cTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCnt < 3:219746/149‑1 (MQ=255) gAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCa < 2:193965/149‑1 (MQ=255) aGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCAc < 4:539630/149‑1 (MQ=255) tttCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCg > 2:180035/1‑135 (MQ=255) tttCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGt > 1:73503/1‑149 (MQ=255) tCGATAATCGGCGGTGGGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGGGAAGGTTTCAACGTATTCGGCGTTAACACGTGCGGCACGC‑CCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCt < 4:1035744/149‑1 (MQ=255) gATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTg > 4:672192/1‑149 (MQ=255) tAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGc < 4:773553/149‑1 (MQ=255) tAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGc < 4:570301/149‑1 (MQ=255) tCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCTCCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGga < 3:1073339/149‑1 (MQ=255) tCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTa > 1:430965/1‑112 (MQ=255) tCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGga > 4:966536/1‑149 (MQ=255) gCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGgacga > 1:1050172/1‑149 (MQ=255) gCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGgacga < 3:127887/149‑1 (MQ=255) gTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACgg < 2:715007/149‑1 (MQ=255) ggTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGagca < 2:1081951/149‑1 (MQ=255) ggTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGagca < 2:187367/149‑1 (MQ=255) agagAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGCAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGcagcag < 2:321978/149‑1 (MQ=255) gagaACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAgg < 3:756550/149‑1 (MQ=255) aaCCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGgag > 4:138687/1‑149 (MQ=255) ggTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCt < 4:994755/149‑1 (MQ=255) ggTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCt < 4:481366/149‑1 (MQ=255) ttttCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGa < 2:73503/149‑1 (MQ=255) ttCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACg < 3:571726/149‑1 (MQ=255) tCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACgg < 2:464634/149‑1 (MQ=255) tCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACgg > 1:986434/1‑149 (MQ=255) cccTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGt < 1:203070/149‑1 (MQ=255) cccTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGt < 3:438944/149‑1 (MQ=255) ccTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCAAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGgacga < 3:649978/123‑1 (MQ=255) cTTTGACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGTaa > 1:1034507/1‑149 (MQ=255) cTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCTGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGTaa > 2:713660/1‑149 (MQ=255) tttCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGTAAg > 1:267582/1‑149 (MQ=255) ttcacttcacCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACTTGCAGCACACTCCAGCATACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGTAAGc < 4:877894/149‑1 (MQ=255) gccttcacCAAAGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGTAAGCaa > 4:289581/3‑149 (MQ=255) gccttcacCAAAGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGTAAGCaa > 3:874673/3‑149 (MQ=255) ttcacCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGcagcag > 4:639536/1‑126 (MQ=255) ttcacCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGcagcag < 3:639536/126‑1 (MQ=255) tcacCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACAGGTGCAGCACGCTCCAGCAGACGGGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGTAAGCAACAGc > 4:646797/1‑149 (MQ=255) tcacCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGTAAGCAACAGc < 2:435581/149‑1 (MQ=255) cacCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGTAAGCAACAGcc < 1:7725/149‑1 (MQ=255) acCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGTAAGCAACAGCCt > 4:578332/1‑149 (MQ=255) acCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGTAAGCAACAGCCt > 4:418000/1‑149 (MQ=255) tttGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGTAAGCAACAGCCTGtt > 3:43460/1‑149 (MQ=255) | CCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAAACGTCACCCGCCTGAGTTTCGATAATCGGCAGTGCGGTCAGAGAACCGGTTTTCCCTTTCACTTCACCTTTGGTGAAGGCTTCAACGTATTCGGCGTTAACACGTGCAGCACGCTCCAGCAGACGAGAGTGGAGGTAGAAAACGTCGCCCGGGAATGCTTCACGTCCTGGCGGACGACGGAGCAGCAGGGAGATCTGACGGTAAGCAACAGCCTGTT > NC_000913/3918770‑3919064 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |