New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3729186 =188 (2.820)4 (0.060) 4/242 NT 2.3% coding (186/1455 nt) xylB xylulokinase
?NC_000913 3729218 = 164 (2.630)coding (154/1455 nt) xylB xylulokinase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 229 total aligned reads displayed.

CTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCTGCTCGTTGAGCAAAATAACTT  >  NC_000913/3729038‑3729334
                                                                                                                                                    |                                                                                                                                                    
cTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGc                                                                                                                                                      <  3:353980/149‑1 (MQ=255)
cTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGc                                                                                                                                                      >  2:530435/1‑149 (MQ=255)
cTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGc                                                                                                                                                      <  3:379729/149‑1 (MQ=255)
 tcgggatagatcttggcacctcgggcgtaaaagttattttgctcaacgagcagggtgaggtggttgctgcgcaaacggaaaagctgaccgtttcgcgcccgcatccactctggtcggaacaagacccggaacagtggtggcaggcaaCt                                                                                                                                                     <  1:468643‑M1/2‑1 (MQ=255)
   gcgcTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGa                                                                                                                                                   >  1:548814/1‑149 (MQ=255)
   gcgcTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGa                                                                                                                                                   >  2:102976/1‑149 (MQ=255)
    cgcTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGAt                                                                                                                                                  <  3:372101/149‑1 (MQ=255)
    cgcTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGAt                                                                                                                                                  <  4:434878/149‑1 (MQ=255)
    cgcTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCAGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGAt                                                                                                                                                  <  4:405910/149‑1 (MQ=255)
          cAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCa                                                                                                                                            <  3:59892/149‑1 (MQ=255)
          atcttggcacctcgggcgtaaaagttattttgctcaacgagcagggtgaggtggttgctgcgcaaacggaaaagctgaccgtttcgcgcccgcatccactctggtcggaacaagacccggaacagtggtggcaggcaac                                                                                                                                                      >  3:11634‑M1/139‑139 (MQ=255)
          atcttggcacctcgggcgtaaaagttattttgctcaacgagcagggtgaggtggttgctgcgcaaacggaaaagctgaccgtttcgcgcccgcatccactctggtcggaacaagacccggaacagtggtggcaggcaac                                                                                                                                                      <  4:11634‑M1/1‑1 (MQ=255)
           aGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCag                                                                                                                                           >  1:331161/1‑149 (MQ=255)
           aGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCag                                                                                                                                           >  4:162083/1‑149 (MQ=255)
           aGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCag                                                                                                                                           >  1:143252/1‑149 (MQ=255)
            gCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCaga                                                                                                                                          <  1:159514/149‑1 (MQ=255)
             cAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCagag                                                                                                                                         <  4:47755/149‑1 (MQ=255)
               aaGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCt                                                                                                                                       >  2:276046/1‑149 (MQ=255)
                 gTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCttt                                                                                                                                     <  1:30190/149‑1 (MQ=255)
                   gCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCa                                                                                                                                   <  4:358842/149‑1 (MQ=255)
                     aCTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCAtt                                                                                                                                 <  4:608693/149‑1 (MQ=255)
                     aCTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCAtt                                                                                                                                 <  2:42195/149‑1 (MQ=255)
                     aCTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCAtt                                                                                                                                 <  2:296993/149‑1 (MQ=255)
                     aCTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCAtt                                                                                                                                 <  4:79988/149‑1 (MQ=255)
                       tctTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCGAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTgc                                                                                                                               >  1:369524/1‑149 (MQ=255)
                       tctTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTgc                                                                                                                               >  3:550676/1‑149 (MQ=255)
                         ttGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTgcgc                                                                                                                             <  4:285351/149‑1 (MQ=255)
                         ttGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTgcgc                                                                                                                             >  3:275707/1‑149 (MQ=255)
                             gcACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCAt                                                                                                                                  >  3:490965/1‑140 (MQ=255)
                             gcACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATAACCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCAt                                                                                                                                  <  4:490965/140‑1 (MQ=255)
                              cacaGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCATTGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCa                                                                                                                        <  1:408330/149‑1 (MQ=255)
                                 aGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGtt                                                                                                                     <  3:431025/149‑1 (MQ=255)
                                   cgcCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTtgc                                                                                                                   <  2:280706/149‑1 (MQ=255)
                                     cccGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTtgcct                                                                                                                 <  3:317013/149‑1 (MQ=255)
                                      ccGTCGTTCCACAAAATGGCAGGGCGTACCACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTtgcctg                                                                                                                >  3:249267/1‑149 (MQ=255)
                                      ccGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTtgcctg                                                                                                                >  3:151859/1‑149 (MQ=255)
                                           gtTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGccacc                                                                                                           >  3:1935/1‑149 (MQ=255)
                                                acaAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGt                                                                                                      >  2:99849/1‑149 (MQ=255)
                                                acaAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGt                                                                                                      >  2:339238/1‑149 (MQ=255)
                                                    aaTGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCg                                                                                                  <  4:577295/149‑1 (MQ=255)
                                                      tGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCggg                                                                                                <  1:352863/149‑1 (MQ=255)
                                                        gCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCTGTTGCCTGCCACCACTGTTCCGGGTc                                                                                              <  4:394736/149‑1 (MQ=255)
                                                          aggtggttgctgcgcaaacggaaaagctgaccgtttcgcgcccgcatccactctggtcggaacaagacccggaacagtggtggcaggcaaCTGATc                                                                                                                                                 >  1:584307‑M1/91‑96 (MQ=255)
                                                             gCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGtt                                                                                         <  4:1935/149‑1 (MQ=255)
                                                             gCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGtt                                                                                         <  1:102976/149‑1 (MQ=255)
                                                             gCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGtt                                                                                         <  1:530435/149‑1 (MQ=255)
                                                                  acacCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGAc                                                                                    <  4:550676/149‑1 (MQ=255)
                                                                    acCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTACAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCa                                                                                  >  4:277094/1‑149 (MQ=255)
                                                                    acCCGTTACTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCa                                                                                  >  4:532371/1‑149 (MQ=255)
                                                                     cccGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATc                                                                                                                                                 <  1:64064/85‑1 (MQ=255)
                                                                     cccGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATc                                                                                                                                                 >  2:64064/1‑85 (MQ=255)
                                                                     cccGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCag                                                                                 >  2:473231/1‑149 (MQ=255)
                                                                      ccGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCaga                                                                                <  4:607054/149‑1 (MQ=255)
                                                                      ccGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCaga                                                                                <  2:143252/149‑1 (MQ=255)
                                                                      ccGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCaga                                                                                >  1:522116/1‑149 (MQ=255)
                                                                        gTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGt                                                                              <  1:120986/149‑1 (MQ=255)
                                                                        gTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGt                                                                              <  2:54523/149‑1 (MQ=255)
                                                                           gCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGa                                                                                     >  2:183944/1‑139 (MQ=255)
                                                                           gCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCAGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGa                                                                                     <  1:183944/139‑1 (MQ=255)
                                                                            cTGAGCATCCAGCGAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGAt                                                                          <  2:369524/149‑1 (MQ=255)
                                                                            cTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGAt                                                                          >  2:310318/1‑149 (MQ=255)
                                                                             tGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATg                                                                         >  4:558507/1‑149 (MQ=255)
                                                                             tGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATg                                                                         <  2:133984/149‑1 (MQ=255)
                                                                                gCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCgg                                                                      <  3:477673/149‑1 (MQ=255)
                                                                                  aTCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATACGGgc                                                                    >  4:351141/1‑149 (MQ=255)
                                                                                       accgtttcgcgcccgcatccactctggtcggaacaagacccggaacagtggtggcaggcaaCTGATCGCCCAGAGCTTTCATTGCGCGATCa                                                                                                                        >  1:50576‑M1/62‑92 (MQ=255)
                                                                                         aaGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGGTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAAc                                                             >  1:276334/1‑149 (MQ=255)
                                                                                          aGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACg                                                            <  4:307790/149‑1 (MQ=255)
                                                                                            gTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGt                                                          <  2:380087/149‑1 (MQ=255)
                                                                                             ttGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTc                                                         <  4:468140/149‑1 (MQ=255)
                                                                                              tGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCa                                                        >  4:83328/1‑149 (MQ=255)
                                                                                                 tCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCt                                                     >  4:546957/1‑149 (MQ=255)
                                                                                                  ccGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCtt                                                    <  4:110459/149‑1 (MQ=255)
                                                                                                    gTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCtttt                                                  <  1:202085/149‑1 (MQ=255)
                                                                                                    gTGCATCTGGCCGGCAATACCCAATGCTTTAACATCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGccac                                                                                                            <  2:509213/91‑1 (MQ=255)
                                                                                                      gCATCTGGCCGGCAATTCCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTcc                                                <  3:528940/149‑1 (MQ=255)
                                                                                                        aTCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGt                                              <  4:249267/149‑1 (MQ=255)
                                                                                                         tCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGtt                                             <  2:163246/149‑1 (MQ=255)
                                                                                                          cTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGttt                                            <  3:563278/149‑1 (MQ=255)
                                                                                                                      aCCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAacca                                >  1:265907/1‑149 (MQ=255)
                                                                                                                        ccAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCa                                                        <  2:262365/123‑1 (MQ=255)
                                                                                                                         cAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCt                             <  1:280904/149‑1 (MQ=255)
                                                                                                                               tttAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCgg                                                                                                 <  3:80362/75‑1 (MQ=255)
                                                                                                                               tttAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCt                       <  4:192387/149‑1 (MQ=255)
                                                                                                                                  aaCGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCTGCt                    <  2:232495/149‑1 (MQ=255)
                                                                                                                                      tCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCTACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCTGCTcaac                <  3:535859/149‑4 (MQ=255)
                                                                                                                                      tCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCTGCTCGtt                <  4:378461/149‑1 (MQ=255)
                                                                                                                                        cTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCTGCTCGTTGa              <  4:275611/149‑1 (MQ=255)
                                                                                                                                        cTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCTGCTCGTTGa              <  4:157226/149‑1 (MQ=255)
                                                                                                                                        cTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCTGCTCGTTGa              <  3:462332/149‑1 (MQ=255)
                                                                                                                                          gCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGa                                                                                     <  3:337298/76‑1 (MQ=255)
                                                                                                                                          gCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGa                                                                                     >  4:337298/1‑76 (MQ=255)
                                                                                                                                          gCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCgg                                                                      <  2:171486/91‑1 (MQ=255)
                                                                                                                                          gCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCgg                                                                      >  1:171486/1‑91 (MQ=255)
                                                                                                                                          gCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCTGCTCGTTGAGc            <  2:557006/149‑1 (MQ=255)
                                                                                                                                          gCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCTGCTCGTTGAGc            >  4:620455/1‑149 (MQ=255)
                                                                                                                                             gagaATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCTGCTCGTTGAGCaaa         <  2:498677/149‑1 (MQ=255)
                                                                                                                                             gagaATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCTGCTCGTTGAGCaaa         >  2:57727/1‑149 (MQ=255)
                                                                                                                                              agaATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCTGCTCGTTGAGCaaaa        <  3:178970/149‑1 (MQ=255)
                                                                                                                                                aaTGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCTGCTCGTTGAGCAAAATa      <  3:620455/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CTCGCGCTTCCAGCAAAGTGCACTCTTGCGCACAGCGCCCGTCGTTCCACAAAATGGCAGGGCGTAACACCCGTTGCTGAGCATCCAGCAAGGTTGCTCCGTGCATCTGGCCGGCAATACCCAATGCTTTAACGTCCTGCAGAGAATGCTGATCGCCCAGAGCTTTCATTGCGCGATCAGTTGCCTGCCACCACTGTTCCGGGTCTTGTTCCGACCAGAGTGGATGCGGGCGCGAAACGGTCAGCTTTTCCGTTTGCGCAGCAACCACCTCACCCTGCTCGTTGAGCAAAATAACTT  >  NC_000913/3729038‑3729334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.