New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4191877 | 53 (0.800) | 3 (0.050) | 3/248 | NT | 5.6% | coding (759/771 nt) | thiG | thiamine biosynthesis ThiGH complex subunit |
? | NC_000913 | = 4191903 | 50 (0.780) | coding (733/771 nt) | thiG | thiamine biosynthesis ThiGH complex subunit |
GTGAGTTGCGAGGCATTTAGCGCCCGCTCTACGTCAGCAGCCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCC > NC_000913/4191756‑4192048 | gTGAGTTGCGAGGCCTTTAGCGCCCGCTCTACGTCAGCAGCCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTg > 2:318559‑M2/1‑148 (MQ=255) gTTGCGAGGCATTTAGCGCCCGCTCTACGTCAGCAGCCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTggcat > 2:529094‑M2/1‑144 (MQ=255) ttGCGAGGCATTTAGCGCCCGCTCTACGTCAGCAGCCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATg > 4:388123/1‑149 (MQ=255) tGCGAGGCATTTAGCGCCCGCTCTACGTCAGCAGCCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGa < 1:207480/149‑1 (MQ=255) cGAGGCATTTAGCGCCCGCTCTACGTCAGCAGCCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGc < 2:174360/149‑1 (MQ=255) gCATTTAGCGCCCGCTCTACGTCAGCAGCCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCaaaa > 4:434131/1‑149 (MQ=255) gcgcCCGCTCTACGTCAGCAGCCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGc < 4:482259/149‑1 (MQ=255) gcCCGCTCTACGTCAGCAGCCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCgg > 3:333156/1‑149 (MQ=255) agcagcCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGa < 3:605382/149‑1 (MQ=255) agcCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTg > 4:372555/1‑149 (MQ=255) gcCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGa < 1:316443/149‑1 (MQ=255) gcCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGa > 4:178634/1‑149 (MQ=255) gcCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGa > 3:614112/1‑149 (MQ=255) gcCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGa < 2:219143/149‑1 (MQ=255) gcCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGa > 2:578048/1‑149 (MQ=255) cGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACg < 2:192854/149‑1 (MQ=255) gTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGt > 4:439949/1‑149 (MQ=255) cGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTa > 2:251605/1‑149 (MQ=255) gTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTGAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAg > 4:516491/1‑149 (MQ=255) gTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAg > 3:328158/1‑149 (MQ=255) aTACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCt < 3:33288/149‑1 (MQ=255) gATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGc > 1:469396/1‑149 (MQ=255) tGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCa < 3:434131/149‑1 (MQ=255) tcgtcCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGa > 2:480518/1‑149 (MQ=255) cccAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGaa > 2:398726/1‑149 (MQ=255) cccAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGaa > 3:169539/1‑149 (MQ=255) ccagtccagtTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGaaa < 1:274624/149‑1 (MQ=255) cagtccagtTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAAt < 2:506428/149‑1 (MQ=255) cagtccagtTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAAt < 3:178634/149‑1 (MQ=255) cagtccagtTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAAt < 1:578048/149‑1 (MQ=255) gtccagtTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGc < 2:343789/149‑1 (MQ=255) cagtTGTCCCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGCCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCtt < 4:381468/149‑1 (MQ=255) agtTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCTGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTc > 2:198075/1‑149 (MQ=255) agtTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTc < 4:193579/149‑1 (MQ=255) ttGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGc > 1:591777/1‑149 (MQ=255) gCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGACTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGt < 4:587521/149‑1 (MQ=255) cGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACg < 4:337859/149‑1 (MQ=255) cGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACg < 4:328158/149‑1 (MQ=255) cTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCg > 3:578291/1‑149 (MQ=255) ggTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCcgc > 1:118740/1‑149 (MQ=255) gTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCcgcg > 3:460685/1‑149 (MQ=255) aTGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGcc < 4:433840/104‑1 (MQ=255) aTGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGcc > 3:433840/1‑104 (MQ=255) tGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCaa < 2:354610/149‑1 (MQ=255) gCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTggcatcggcatgaaaaccttcagcgatcgctggcgacaactggactgggacgacatccgcctgcgtatcaacggcaaaacggctgctgacgtagagcgggcgctaaatgcctcg < 1:616866‑M2/149‑115 (MQ=255) cTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTAt > 2:231395/1‑149 (MQ=255) tCCAGAAATCCGGTCAGCGGGCTGGTggcatcggcatgaaaaccttcagcgatcgctggcgacaactggac < 4:17915‑M2/71‑46 (MQ=255) tCCAGAAATCCGGTCAGCGGGCTGGTggcatcggcatgaaaaccttcagcgatcgctggcgacaactggac > 3:17915‑M2/1‑26 (MQ=255) tCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTATCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTAtt < 4:333156/149‑1 (MQ=255) tCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGcc < 4:536773/111‑1 (MQ=255) tCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGcc > 3:536773/1‑111 (MQ=255) tCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTAtt > 4:446879/1‑149 (MQ=255) ccAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTATTc > 2:142376/1‑149 (MQ=255) cAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTATTCa < 2:196326/149‑1 (MQ=255) aGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTATTCAc < 3:439949/149‑1 (MQ=255) aGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTATTCAc > 4:471156/1‑149 (MQ=255) aaaTCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTATTCACTa > 1:501792/1‑149 (MQ=255) gTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACcgc < 1:457106/149‑1 (MQ=255) tggtggCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGccccc > 4:144637/1‑149 (MQ=255) tggtggCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGccccc > 3:396032/1‑149 (MQ=255) | GTGAGTTGCGAGGCATTTAGCGCCCGCTCTACGTCAGCAGCCGTTTTGCCGTTGATACGCAGGCGGATGTCGTCCCAGTCCAGTTGTCGCCAGCGATCGCTGAAGGTTTTCATGCCGATGCCTCCAGAAATCCGGTCAGCGGGCTGGTGGCATGAGCAAAATAACTGCGGCTGCCCGGTCCGGACTGACGTGCCAGTAGGCCTGCTTCTACCGCCAGACGAAATGCCTTCGCCATGTTGACGGGATCGTCCGCGACGGCAATCGCCGTATTCACTAACACCGCGTCGGCCCCC > NC_000913/4191756‑4192048 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |